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3 protocols using atorvastatin

1

Investigating Leptin Signaling Pathways

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OE33 cells were treated 24 h before leptin stimulation with expression plasmids containing DN-Ras, DN-cdc42, DN-RhoA and DN-Rac1 (cDNA Resource Centre, Bloomsburg University, Pennsylvania, USA), using previously described methodology [19 (link)]. Where appropriate, the prenylation inhibitors FTI276 and GGTI298 (both 10 μM) (both Tocris, Abingdon, Oxford, UK) were added 24 h prior to leptin stimulation [29 (link)]. In selected experiments, atorvastatin (0.1 μM) (Tocris) and mevalonate (100 μm) (Sigma) were initially added 72 h prior to stimulation with leptin, with a medium change with fresh reagents added after 48 h.
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Apoptosis pathway inhibitors protocol

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ABT-263, A-1331852 and A-1210477 were from AbbVie (North Chicago, IL, USA),
ABT-199, epigallocatechin gallate (EGCG), CB-839, simvastatin, rapamycin and
torin-1 from Selleck Chemicals (Houston, TX, USA),
gamma-L-glutamyl-p-nitroanilide (GPNA) from Insight
Biotechnology (Wembley, Middlesex, UK), azaserine from Cambridge Bioscience
(Cambridge, UK), aminooxyacetate (AOA), sodium palmitate, dimethyl
α-ketoglutarate, oxaloacetate and citrate from Sigma-Aldrich
(Gillingham, UK), L-glutamine from Life Technologies (Paisley, UK) and
GSK2194069, SB204990, atorvastatin, pitavastatin and bafilomycin A1 from Tocris
(Abingdon, UK). Antibodies against PARP, BCL-2, MCL-1, BAX, BAK and GAPDH were
from Santa Cruz Biotechnology (Santa Cruz, CA, USA), caspase-3, caspase-9,
BCL-XL, BCL-w, BIM, PUMA, BAD, IDH2, ACL, ACO2, ATG5 and ATG7
from Cell Signaling Technology (MA, USA), BID from Prof. J. Borst (The
Netherlands Cancer Institute, Amsterdam, the Netherlands), NOXA from Millipore
(Watford, UK) and SLC1A5, GLS, GFAT, GLUD1, IDH3, FASN and HMGR from Abcam
(Cambridge, UK).
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3

Cytokine-Induced Endothelial Cell Culture

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Cells were cultured in U-shaped, nonadherent 96-well plates (150 μL, 5.0 × 103 per well) in StemSpan-ACF medium (#09855, Stem Cell Technologies) supplemented with 20% BIT9500 serum replacement (#9500, Stem Cell Technologies), CC100 (#02690, Stem Cell Technologies) mix of cytokines, 50 ng/mL VEGF (#AF-100-20, PeproTech), and penicillin with streptomycin (P4333-100ML, Sigma Aldrich). Compositions of other tested media are shown in Supplementary Table 1. After 48 hours, 50 μL of fresh medium was added; then, 50 μL of medium was changed every other day. On day 6 of culture, cells were stimulated with 7.5, 15, or 30 μmol/L atorvastatin (#3776, Tocris), 7.5, 15, or 30 μmol/L resveratrol (R5010-100MG, Sigma Aldrich), 125, 250, or 500 μmol/L acetylsalicylic acid (A5376-100G, Sigma Aldrich), 2.5, 5.0, or 10 μmol/L sulforaphane (S441-5MG, Sigma Aldrich), or 1.25, 2.5, or 5.0 mmol/L metformin (#317240-5MG, Sigma Aldrich). Conditioned media were collected after 48 hours. The controls, nonconditioned media, contained the same concentrations of stimulants and were kept for 48 hours in a cell culture incubator in the same conditions as stimulated cells. Wash-out conditioned media were collected from stimulated cells after washing with PBS and reseeding on 96-well plates in the complete fresh medium. DMSO, which was used to dissolve all stimulants, was added to the control wells.
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