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Daf fm da

Manufactured by Zeiss
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The DAF-FM DA is a fluorescent indicator used to detect and measure nitric oxide (NO) in biological samples. It is a highly selective and sensitive probe that reacts with NO to produce a fluorescent product. The DAF-FM DA can be used in various research applications, including the study of cellular signaling pathways, oxidative stress, and inflammatory processes.

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4 protocols using daf fm da

1

Quantifying Nitric Oxide in 3D Cultures

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After trypsin treatment prior to plating in 3D-on-top culture geometry, cells were washed and resuspended in media containing 20 μM 4-amino-5-methylamino-2’,7’-difluorofluorescein diacetate (DAF-FM DA; Invitrogen D23844) 27. DAF-FM DA was maintained at this concentration through plating, application of lrECM drip, and compression (1 hr total) before cultures were washed briefly with DAF-FM DA-free media, and imaged in bright-field and widefield fluorescence with a 20x objective on a Zeiss Axiovert 200 at the indicated time points. For 24 hr time points, DAF-FM was not applied until the following day, 1 hr before imaging. In ImageJ, each individual cell (with area a) and a local background region were traced in bright-field images and total cell intensity (I0) and mean pixel background intensity (b), were measured in the corresponding fluorescence image. Background-subtracted intensity for each cell (I) was calculated as I = I0 / (ab). Normalized intensity for each cell (IN) was calculated as IN = I / < IU>, where < IU> was the mean background-subtracted intensity for uncompressed cells in a paired gel experiment.
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2

Visualizing ROS and NO in Fungal-Infected Plants

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Cellular ROS accumulation in fungal infected plant cells was analyzed by using DAB (Sigma, D-8001) staining method88 (link). Briefly, infected tissues were immersed in DAB solution (1 mg/ml, pH 3.8) at room temperature for 8 h and destained with decolorant solution (ethanol: acetic acid = 94: 4, v/v) for 1 h. The DAB-stained plant tissues were examined under a Zeiss LSM780 confocal microscope (Gottingen, Niedersachsen, Germany).
To assess NO production, fungal hyphae or plant tissue were stained using 10 μM DAF-FM DA (Sigma, Shanghai, China). To confirm genuine reaction between DAF-FM DA and NO, a cell-permeant NO scavenger cPTIO (Sigma) at 100 μM was included as a control. DAF-FM DA combined with or without cPTIO was directly applied towards plant tissues with or without Fg infection. Plant tissues or fungal hyphae were stained with DAF-FM DA dye for 30 min at room temperature and visualized in a bight/fluorescence field of view under a Zeiss LSM780 confocal microscope (Gottingen) at the excitation/emission wavelengths of 488/525 nm. Each experiment was repeated three times.
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3

Multimodal Cellular Imaging Protocol

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Cell images using DIC, DAPI, FM4-64, DAF-FM DA, and Nile red staining were acquired using fluorescence microscopes [AxioPlan2 (Zeiss) and DeltaVision Elite (GE Healthcare)]. For nuclear staining, cells were fixed with 2% glutaraldehyde for 10 min on ice, washed three times with phosphate-buffered saline, and observed under a fluorescence microscope after mixing with DAPI (25 μg/ml) for staining. For vacuole staining, 1 μl of FM4-64 (1 μg/μl) (ThermoFisher) was added to 1 ml of cell culture, and cultures were incubated in the dark at room temperature for 45 min. After incubation, cells were washed in media without FM4-64, then incubated again for 45 min before observation. For nitric oxide staining, 5 μl of DAF-FM DA (1 μg/μl) (AdipoGen) was added to 1 ml of cell culture. Then, cultures were incubated in the dark at room temperature for 45 min. Cells were washed twice with media before observation. Signal intensity of DAF-FM DA was obtained using softWoRx software (GE Healthcare) and calculated by taking the average of 10 fluorescence points in each image. For lipid droplet staining, 1 μl of Nile red (1 μg/μl) (Wako) was added to 1 ml of cell culture, and cultures were incubated in the dark at room temperature for 5 min before observation.
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4

In Vivo Nitric Oxide Detection

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Leaf disks from the control and flg22-treated leaves of intact plants, as well as from the leaves above them, in three replications, were infiltrated with 10 μM 4-amino-5-methylamino-2′,7′-difluorofluorescein diacetate (DAF-FM DA) (Sigma-Aldrich, St. Louis, MO, USA) and dissolved in 10 mM Tris-HCl buffer (pH 7.4) under vacuum for 30 min in the dark at room temperature. After incubation, samples were rinsed twice with 10 mM Tris-HCl buffer solution (pH 7.4). The fluorescence intensity of DAF-FM DA was detected in the samples with a Zeiss Axiowert 200M-type fluorescence microscope (Carl Zeiss Inc., Jena, Germany) equipped with a high-resolution digital camera (Axiocam HR, Carl Zeiss Inc., Jena, Germany). Data were evaluated by the AXIOVISION REL. 4.8 software (Carl Zeiss Inc., Munich, Germany) [117 (link),118 (link)]. Leaves of three different plants were used for sampling in the case of each treatment. Measurements were repeated 3 times using new plant generations.
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