The largest database of trusted experimental protocols

5 protocols using tsg101 c 2

1

Isolation and Analysis of Extracellular Vesicles

Check if the same lab product or an alternative is used in the 5 most similar protocols
To prepare brain homogenates, tissue was removed from the frontal lobe,
lysed in strong lysis buffer (detailed above) with proteinase inhibitor,
homogenized by pipette, and centrifuged at 10,000 × g for 10 minutes to
discard whole cells and intact cellular debris. For confirmation of EV proteins
in purified lysates, 5X Laemmli sample buffer [10% SDS, 250 mM Tris pH 6.8, 1
mg/mL bromophenol blue, 0.5 M DTT, 50% glycerol, 5% BME] was added to EV
isolates for a final concentration of 1X. For immunoblot analysis of CD63, DTT
and BME were omitted from lysis and sample buffers to allow the protein to run
in non-reducing conditions. Gel electrophoresis and western blotting was
performed as previously described (Hurwitz et
al., 2017b
). Equal volume of gradient lysates were loaded into an
SDS-PAGE gel. Blots were probed with the following antibodies: Alix (Q-19; Santa
Cruz Biotechnology), HSC70 (B-6; Santa Cruz), TSG101 (C-2; Santa Cruz), CD63
(TS63; Abcam), Rab8a (63-BJ ; Santa Cruz), and CD81 (H-121 ;Santa Cruz), rabbit
anti-mouse IgG (Genetex, 26728), rabbit anti-goat IgG (Genetex, 26741), goat
anti-rabbit IgG (Fab fragment) (Genetex, 27171). Blots were imaged using an
Image Quant LAS4000 (General Electric) and processed with ImageQuant TL v8.1.0.0
software, Adobe Photoshop CS6 and CorelDraw Graphic Suite X5.
+ Open protocol
+ Expand
2

Western Blotting of Cell Lysates

Check if the same lab product or an alternative is used in the 5 most similar protocols
Western blotting was performed as previously described[6 (link)] on samples lysed in RIPA buffer, using the following antibodies: flotillin-1 (C-2, SantaCruz, 0.4μg/ml), MHC-I (HLA-A; EP1395Y, Abcam, 0.103μg/ml), TSG101 (C-2, SantaCruz, 1μg/ml), calnexin (#2433, CellSignallingTechnologies, 0.8μg/ml).
+ Open protocol
+ Expand
3

Extracellular Vesicle Protein Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
EV pellets were resuspended in 50 µl of lysis buffer (0.15 M NaCl, 5 mM EDTA, pH 8, 1% Triton X-100, and 10 mM Tris-HCl, pH 7.4), and protein contents were quantified using a BCA protein assay kit according to the manufacturer’s protocol (Thermo Fisher Scientific). Protein extracts from EV pellets and cell lysates were prepared with Laemmli buffer in nonreductive conditions, heated at 95°C for 5 min, and separated on 15% polyacrylamide gels before transfer to a nitrocellulose membrane (Hybond ECL plus; Thermo Fisher Scientific). Membranes were blocked in 5% nonfat milk and incubated with the anti-CD9 (H-110; Santa Cruz Biotechnology, Inc.), -CD63 (H-193; Santa Cruz Biotechnology, Inc.), -TSG101 (C-2; Santa Cruz Biotechnology, Inc.), LAMP1 (1D4B; Abcam), and α-tubulin antibodies (4074; Abcam) followed by the horseradish peroxidase–coupled secondary antibody and then were subjected to enhanced chemiluminescence.
+ Open protocol
+ Expand
4

Exosome Protein Profiling by Immunoblotting

Check if the same lab product or an alternative is used in the 5 most similar protocols
Exosomes (10 μg or 109 particles) were resuspended in PBS with protease inhibitors. The suspension was mixed with Laemmli buffer, heated at 95 °C for 5 min, and chilled on ice for 5 min before loading onto SDS gel. Immunoblots probed with antibodies for proteins: Tsg-101 (C-2, 1:1000, Santa Cruz), CFP (C192, 1:1000, ATCC), 19kDa-lipoprotein (IT-19, 1:1000, ATCC), His-tag (1:500, Santa Cruz), CD81 (1:500, SBI), CD63 (1:500, Systems Bioscience), and, DsRed (632393, 1:1000, Clontech). Primary antibody incubation was followed with HRP-conjugated secondary antibodies (1:25,000, Pierce) and detected using enhanced chemiluminecence kit (Pierce). As loading controls, primary mouse mAbs against either alpha-Tubulin, 1/1000 dilution (Cat. T9026, Sigma) or Lamp-1 1/500 dilution (SC-17768, Santa Cruz Biotechnology or 1D4B, DHSB) were used.
+ Open protocol
+ Expand
5

Exosome Protein Profiling by Western Blot

Check if the same lab product or an alternative is used in the 5 most similar protocols
Exosomes (10 μg) were resuspended in 1X PBS with protease inhibitors. The suspension was mixed with Laemmli buffer, heated at 95°C for 5 min, and chilled on ice for 5 min before loading onto SDS gel. Whole cell lysates were prepared in RIPA buffer. Suspension was mixed with Laemmli buffer, heated at 95°C for 5 min. before loading onto SDS gel. Immunoblots probed with antibodies for proteins: ubiquitin (P4D1, 1:1000, Santa Cruz), Tsg101 (C-2, 1:1000, Santa Cruz), Hrs (V-20, 1:500, Santa Cruz), Tubulin (T5293, Sigma), CFP (C192, 1:1000, ATCC), Kat-G (IT-42, 1:20, ATCC), His (1:500, Santa Cruz), GroES (SA-12, 1:20, ATCC), HspX (IT-20, 1:15, ATCC), Park2 (ARP43038, 1:500, Aviva). Primary antibody incubation was followed with HRP-conjugated secondary antibodies (1:25,000, Pierce) and detected using enhanced chemiluminecence kit (Pierce).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!