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Software

Manufactured by MedCalc
Sourced in Belgium, United States, United Kingdom, Austria, Brazil, Israel

MedCalc is a software application designed for medical and scientific calculations. It provides a comprehensive set of statistical and analytical tools to assist healthcare professionals and researchers in their data analysis tasks. The software's core function is to enable users to perform a variety of calculations, including statistical analyses, diagnostic test evaluations, and sample size calculations, among others. MedCalc is a versatile tool that can be utilized across various medical and scientific disciplines.

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1 316 protocols using software

1

Postoperative Complication Prediction Model

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SPSS software (version 26.0), R software package (version 4.1.1), and MedCalc software (version 19.0.4) were used for statistical analysis. Continuous data were expressed as medians and interquartile ranges, and the Mann-Whitney U test was used to assess between-group differences in these data. Categorical variables were presented using numbers and percentages, and the χ 2 or Fisher exact test was used to assess between-group differences in these variables. Logistic regression was used to perform univariate and multivariate analyses of postoperative complications, and logit transformation was used to standardize the distribution of continuous variables. The MedCalc software was used to plot the ROC curves of multiple models. The ROCs of the two cohorts were compared using the DeLong test. Differences in the aforementioned statistical analysis were judged to be statistically significant when the p value was less than 0.05. The nomogram and calibration curve was plotted using the rms package, and DCA was performed using the rmda package. The Hosmer-Lemeshow test was used to determine the goodness-of-fit of the nomogram in both cohorts, and it was satisfying when the p value exceeded 0.05.
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2

Diagnostic Performance of Liver Fibrosis Indices

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All data were analyzed using SPSS 19.0 and MedCalc software, and numerical variables are presented as the mean±standard of deviation or M (IQR). For variables with normal distribution, differences in the ARFI, AAR, APRI, and FIB-4 index among the CP class groups were analyzed using one-way analysis of variance; otherwise the Kruskal-Wallis test was used. The correlation of the ARFI, AAR, APRI, and FIB-4 index with the CP class was analyzed using Spearman’s correlation. MedCalc software was used to draw the receiver operating characteristic (ROC) curve to evaluate the performance of the ARFI, AAR, APRI, and FIB-4 index in the diagnosis of decompensated cirrhosis and to determine the optimal cut-off value (maximum of the sum of sensitivity and specificity). The combined prediction model (ARFI+AAR, ARFI+APRI, and ARFI+FIB-4 index) was constructed using logistic regression analysis. The ROC curve was drawn using the predicted probability and the accuracy of decompensated cirrhosis diagnosis using each combined model was assessed using the area under the curve (AUC). The AUC in each combined model was compared using the DeLong test. p<0.05 was considered to be statistically significant.
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3

Diagnostic Performance of miRNAs in HCC

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All data were presented as mean ± standard deviation or n (%). The characteristics of the participants and relative expression of the miRNAs were compared among the HCC group (n = 50), hepatic cirrhosis group (n = 50), and healthy group (n = 50). Numerical data were analyzed by the Shapiro-Wilk test for assessment of normality and the comparison among different groups was carried out by one-way analysis of variance or the Kruskal-Wallis test. Categorical data were calculated by the Chi-square test or Fisher’s exact test. In addition, the predicted probability of being diagnosed with HCC was used as a surrogate marker to construct the receiver operating characteristic (ROC) curve (Yuan et al., 2021b (link)). And the area under the curve (AUC) was used as an accuracy index to evaluate the diagnostic performance of the miRNAs, miRNA panel, or AFP. Data from RT-qPCR were statistically analyzed using SPSS software (Version 18.0, SPSS, Chicago, IL, United States) and the ROC curve analysis was computed using MedCalc software (Version 11.0.3.0, MedCalc software, Mariakerke, Belgium). A value of p < 0.05 was considered significantly different.
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4

Quantitative MRI for Tumor Recurrence Prediction

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SPSS 20.0 and MedCalc software were employed for data analysis. Kolmogorov-Smirnov test was used for the normality test. The intra-class correlation coefficient (ICC) was employed for repeatability of IVIM (ADC_IVIM, D, D*, f) and DKI (ADC_DKI, MK, and MD) values. Independent student’ t-tests or Mann-Whitney U tests were used to compare differences between recurrence and PSC (P<0.05). Receiver characteristic operator (ROC) curves were generated, and the cut-off values were determined by ROC analysis (MedCalc software). Logistic regression was employed to build predictive models. DeLong test was employed to compare different ROC curves, the level of α was set at 0.05 divided by the number of comparisons (P<0.05/3) (28 (link)).
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5

Inter-reader Variability in Low-Dose CT Lung Cancer Screening

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To calculate the inter-reader variability, a non-weighted binary κ-statistic for multiple readers was used by computing the arithmetic mean of the κ-values of each pair of readers (κvalue 0-0.2 poor; 0.21-0.4 fair; 0.41-0.6 moderate; 0.61-0.8 substantial; 0.81-1 almost perfect), using the MedCalc® software [24, 25] . The κ-statistic was performed with and without the additional use of MIP and CAD, once for the standard low-dose CTs and once for the ultralow-dose CTs.
The McNemar test, Wilcoxon's test, the chi-square test and the Kappa statistic analysis were performed using MedCalc® software, version 7.6.0.0. (MedCalc Software, Mariakerke, Belgium) [26] .
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6

Comparing Nutritional Risk Evaluation

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We compared high and low nutritional risk using the NUTRIC and modified NUTRIC scores. Categorical variables were compared using the chi-square test and continuous variables using Student’s t-test or the Wilcoxon–Mann–Whitney test. The model’s discrimination for predicting 28-day mortality was assessed by the area under the receiver operating characteristic (ROC) curve for both the NUTRIC Score and modified NUTRIC Score. The ROC curves of the two scores were compared using MedCalc software (version 1.76; MedCalc software, Ostend, Belgium). All other statistical analysis was conducted using SPSS software (version 21.0; SPSS Inc., Chicago, IL, USA). All significance tests were two-sided; a p-value < 0.05 was considered significant.
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7

Chernivtsi Region Child Cystitis Dynamics

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The aim of this work was to analyze the health status of the child population of the Chernivtsi region, especially the dynamics of the prevalence and incidence of cystitis. The official statistical data have been studied (reports on the state of medical care for children in the Chernivtsi region and data from the Center of Medical Statistics of the Ministry of Healthcare from 2006 to 2017). This work is a fragment of the scientific and research paper: “Scientific support, monitoring and evaluation of models of health care development in Ukraine at the regional level” (due date 2015–2017), state registration no. 0115U002852. To substantiate the provisions and identification of priority approaches to optimize and improve the quality of medical care at the regional level, the peculiarities of the dynamics of the prevalence and incidence of cystitis among the child population of the Chernivtsi region have been analyzed.
Statistical data were calculated and compared using the MedCalc software, developed by “MedCalc software” (Ostend, Belgium). The immunohistochemical data are reported as mean±SEM. The data obtained were statistically processed using the Mann-Whitney U test. Bivariate correlation between variables was determined by Pearson’s correlation coefficients. A p-value <0.05 was considered significant. Results are represented as mean±SD.
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8

Statistical Analysis of Assay Comparison

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GraphPad Prism Software (version 8.3.0, CA, United States), Medcalc software (Ostend, Belgium), and Analyse-it Software (version 5.66, Leeds, United Kingdom) were used to statistically analyze all data. Linear regression analysis was performed by GraphPad to estimate the association between the assays. The Bland–Altman difference plot, which can be drawn by Medcalc software, is helpful in demonstrating the potential relationship between the differences and the magnitude of measurements exhibiting any systematic bias and in identifying possible outliers. Weighted Deming regression was performed by Analyse-it to complete the data comparison.
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9

Multivariate Predictive Modeling Protocol

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Statistical analysis was performed with R software (version 4.1.0, http://www.R-project.org), SPSS software (version 19.0, IBM, Armonk, NY, USA), and MedCalc software (version 19.8, Mariakerke, Belgium). The Chi-Squared test or Fisher exact test and the Student t-test or Mann-Whitney U test were used to compare categorical variables and continuous variables, respectively. The ICC and LASSO regression was performed using the “irr” and “glmnet” packages. The nomogram and DCA were plotted by the “rms” and “rmda” packages. The MedCalc software was used to perform the ROC curves. Delong test was performed to compare different AUCs. A value of p < 0.05 was considered as statistically significant.
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10

Perioperative Risk Factor Analysis

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For each factor, univariate and multivariate analyses were utilized. When p< 0.30 was obtained by univariate analysis, the variables were subjected to multivariate analysis. Pearson’s χ2 test and the Mann–Whitney U test were used individually to compare binary and continuous data. The Hosmer–Lemeshow chi-square statistic was applied to assess the goodness of fit for comparing observed and projected outcomes at different risk deciles. Using MedCalc software, the predictive power of the perioperative variables identified in multivariate analyses was assessed by calculating the area under the curve (AUC) value of receiver operating characteristic (ROC) plots. AUC values ranging from 0.7 to 0.9 indicate good predictive value, while values less than 0.7 indicate poor predictive value. p< 0.05 was considered statistically significant. Data analysis was performed using SPSS software (version 25.0) and MedCalc software (version 11.4.2.0).
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