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86 protocols using lipopolysaccharides (lps)

1

LPS-Induced Acute Lung Injury Model

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LPS-induced ALI was performed to establish an ALI mouse model. Briefly, 1 mg/mL of LPS (Escherichia coli, serotype 055:B5; Sigma-Aldrich, St. Louis, MO, USA) was injected into mice through intratracheal instillation, and the control group was injected with the same volume of sterile phosphate-buffered saline (PBS), as in Wang et al. [27 (link)]. Mice were then sacrificed under ether narcotization at 24 h after challenge with LPS or PBS to collect 1% heparin-anticoagulated peripheral whole blood, spleen, bronchoalveolar lavage fluid (BALF), and lung tissues. The WT+LPS+PGRN and PGRN−/−+LPS+PGRN groups were treated with 2 μg of recombinant-mouse PGRN protein (CF, R&D Systems, Minneapolis, MN, USA) 30 min after LPS challenge through intratracheal instillation [19 (link)]. Blood, spleen, BALF, and lung tissues were collected as indicated for further analysis.
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2

Murine Model of Th17-Driven Neutrophilic Asthma

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A murine model of neutrophilic asthma that was characterized by Th17 cell responses was generated as described previously [18 ]. In brief, mice were intranasally sensitized with 75 μg LPS-depleted OVA (grade V; Sigma-Aldrich, St. Louis, MO, USA) plus 10 μg LPS (E. coli serotype 026 : B6; Sigma-Aldrich) on days 0, 1, 2, and 7 and then challenged with 50 μg OVA alone on days 14, 15, 21, and 22. One day after the final challenge, the mice were euthanized for further analyses.
In this study, the mice were divided randomly into four groups (n = 6 mice) as follows: (i) mice sensitized with phosphate-buffered saline (PBS) and challenged with OVA (control group); (ii) mice sensitized with OVA plus LPS and challenged with OVA (asthma group); (iii) mice treated with control IgG (R&D Systems) for half an hour before sensitization to OVA plus LPS and the same challenge with OVA later (control IgG group); (iv) mice treated with anti-HMGB1 IgG (R&D Systems) half an hour before sensitization to OVA plus LPS and the same challenge with OVA later (anti-HMGB1 group). Anti-HMGB1 IgG or control IgG was administered intranasally (200 μg/kg) on days 14, 15, 21, and 22 a half an hour before OVA challenge (Figure 1(a)). The dose of anti-HMGB1 IgG was predetermined using staining analysis of airway inflammation in mice receiving 100–400 μg/kg of anti-HMGB1 IgG.
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3

Macrophage polarization by Taenia solium antigen

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The matured BMDMs obtained above were divided into four groups with 1 × 106 cells for each group: (i) BMDMs incubated with Ts-AES (4 μg/ml) (AES + Mφ); (ii) BMDMs incubated with LPS (100 ng/ml) (Solarbio, China) and IFN-γ (10 ng/ml) (R&D Systems, USA) (LPS + IFN-γ + Mφ); (iii) BMDMs incubated with LPS (100 ng/ml) and IFN-γ (10 ng/ml) in the presence of Ts-AES (4 μg/ml) (AES + LPS + IFN-γ + Mφ); (iv) BMDMs incubated with PBS as the control group (PBS + Mφ). After being incubated for 24 h, cells were collected, and M1 macrophage-associated marker CD86 and M2 macrophage-associated marker CD206 expressed on the surface of the cells were measured by flow cytometry.
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4

Stimulation and Activation of B Cells

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CH12 and primary splenic B cells (from 129Sv1 mouse strain) were cultured in RPMI media supplemented with 10% heat inactivated serum, 10 mM HEPES, 1 mM sodium pyruvate, 100 U/mL Penicillin, 100 U/mL Streptomycin, 50 μM β-mercaptoethanol, 1x non-essential amino acids.
CH12 cells were stimulated for 2 or 4 days at a density of 105 cells/ml, in the presence of 50 µg/ml of LPS (Sigma) (LPS stimulation); 50 µg/ml LPS and 20 ng/ml IFN-γ (R&D) (IFN-γ stimulation); 50 µg/ml LPS and 25 ng/ml IL4 (eBiosciences) (IL4 stimulation); 50 µg/ml LPS, 10 ng/ml IL4, and 2 ng/ml TGFβ (R&D) (LIT stimulation); 1 µg/ml anti-CD40 (eBiosciences), 10 ng/ml IL4, and 2 ng/ml TGFβ (CIT stimulation). Purification and stimulation of primary splenic B cells were as described (ref. 40 (link)).
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5

Splenic B Cell Differentiation Assay

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Resting splenic B cells were collected by negative selection with anti-CD43 and anti-CD11b magnetic beads (Miltenyi Biotec) and cultured in RPMI media (Invitrogen) containing 10% (v/v) fetal bovine serum (Sigma-Aldrich), 100 U/ml penicillin-streptomycin (Invitrogen), 2 mM glutamine (Invitrogen), and 50 μM β-mercaptoethanol (Sigma-Aldrich). Cells were plated at 0.5 × 106 cells/ml in 24-well plates and stimulated with 5 μg/ml LPS (E. coli serotype 0111:B4; Sigma-Aldrich) to induce IgG3; LPS plus 5 ng/ml recombinant IL4 (Biolegend) for IgG1; LPS plus 2 ng/ml TGF-β (R&D Systems) for IgG2b; and LPS plus 25 ng/ml IFN-γ (R&D Systems) for IgG2c. Flow cytometry analysis of switched populations was conducted after 4 days using cells stained with FITC- or PerCP-labeled anti-B220 (clone RA3-6B2, eBioscience), and either allophycocyanin-conjugated anti-IgG1 (clone M1-14D12, eBioscience), recombinant PE-conjugated IgG2b, IgG2c, or IgG3 antibodies (Southern Biotech).
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6

Naïve B Cell Activation Protocols

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Splenic B cells were harvested and processed into single-cell suspensions by pressing through a 70 μm cell strainer. Naïve B cells were then purified by negative selection using anti-CD43 microbeads (Miltenyi Biotec) according to the manufacturer’s protocol. B cells were plated at a density of 1×106 cells/ml in B cell media in a six-well dish. B cells were then stimulated with one of the following cytokine cocktails: 33 μg/ml LPS (Sigma-Aldrich); 33 μg/ml LPS plus 25 ng/ml IL-4 (R&D Systems); or 5 μg/ml LPS, 2 ng/ml recombinant human TGF-β1 (R&D Systems), and 333 ng/ml anti-IgD dextran conjugates (Fina Biosolutions). Cultures were split by half at 48- and 72-hr post-stimulation.
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7

Murine Macrophage-Conditioned Media Preparation

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The murine macrophage cell line Raw264.7 (Korean Cell Line Bank, Seoul, Korea) was cultured in DMEM (Gibco) supplemented with 10% FBS (without heat-inactivation, Gibco) and 25 mM HEPES buffer (Gibco) with 1% penicillin-Streptomycin (Gibco). Cells were cultured in 5% CO2/95% humidified air at 37 °C. The medium was changed every other day. For collecting macrophage-conditioned media (MØCM), the cells were cultured in a medium containing LPS (100 ng/mL; R&D Systems, Inc., Minneapolis, MN, USA) and IFN-γ (20 ng/mL; R&D Systems, Inc.) for 24 h. After the stimulation with LPS and IFN-γ, the medium was changed to new serum-free-DMEM and incubated for an additional 24 h. After the incubation, the macrophage-cultured medium was collected and centrifuged at 2000× g for 10 min. The supernatant was sterilized by filtrating through a 0.22 μm filter (Merck Millipore, Burlington, MA, USA), which is used as MØCM. The collected MØCM were kept at −80 °C until used.
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8

Ex Vivo Murine B Cell Differentiation

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For ex vivo assays, naïve splenic B cells were purified by CD43 negative selection (Miltenyi Biotec), cultured at a density of 106 per ml, and stimulated with either LPS (30 μg/ml, Sigma), LPS (30 μg/ml) + IL-4 (12.5ng/ml, R&D Systems), or LPS (10 μg/ml) + TGF-β (2ng/ml, R&D Systems) + anti-IgD dextran conjugates (300 ng/ml, Fina BioSolutions) for CSR to IgG3, IgG1, or IgA, respectively. For proliferation assays, naïve splenic B cells were labeled with 5 μM CellTrace Violet (CTV, Thermo Fisher Scientific) according to manufacturer’s protocol, activated with LPS, LPS+IL-4 or LPS+TGFβ+ anti-IgD dextran and dye dilution tracked from d0 to d4. Antibodies for flow cytometry were as follows: B220 (BV510, FITC, PerCPCy5.5; clone RA3–6B2), IgA (PE; clone mA-6E1), IgG1 (BV510, APC; clone X56), IgG3 (FITC; clone R40–82), CD69 (PE/Cy7; clone H1.2F3), CD86 (AF700; clone GL-1), MHC Class II I-Ab (eFLuor450; clone AF6–120.2), Fas (BV510; clone Jo2), GL7 (FITC, PerCP-eF710; clone GL7) and Zombie Red fixable viability dye; all were purchased from eBioscience, BD, and BioLegend. Samples were analyzed on an LSR II flow cytometer (BD). Cell sorting was carried out in a FACSAria cell sorter (BD). All data analysis was performed using FlowJo software (version 9.9; Tree Star).
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9

Neonatal ARDS Mouse Model and IL-37 Treatment

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The neonatal ARDS mouse model was established as previously described, with minor revision [17 (link)]. Thirty neonatal C57BL/6 mice were randomly divided into a normal saline control group (n=10) and an LPS-induced group (n=20). Mice in the LPS-induced group were injected intraperitoneally with LPS (10 mg/kg) purchased from Sigma-Aldrich (St. Louis, MO). Mice in the normal saline control group were injected with an equal volume of sterile saline. Ten mice in the LPS-induced group were intraperitoneally injected with 1 μg of recombinant IL-37 (R&D Systems, Shanghai, China) per mouse [15 (link)] 2 h before LPS injection. The other 10 LPS-induced mice and the 10 control mice received the same weight-based volume of vehicle. All mice were sacrificed 72 h after LPS or saline treatment and blood samples were collected.
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10

Macrophage Response to Cigarette Smoke and Inflammatory Stimuli

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Monocyte-derived macrophages from healthy donors were exposed to different dilutions of CSE (2%, 4%, 8% and 10%), LPS (0.1 μg/mL; from E. coli 055: B5, Sigma-Aldrich), IL-4 (10 ng/mL; R&D Systems) alone or in combinations (4% CSE + LPS 0.1 μg/mL or 4% CSE + 10 ng/mL IL-4) for 2 h or 24 h. Monocytes from patients with COPD were exposed to LPS 0.1 μg/mL or 10 ng/mL IL-4 for 24 h. The supernatant was collected, and the cells were left on the plate, stored at − 80 °C, and thawed immediately prior to cytokine production and gene expression assays.
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