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10 protocols using ec plan neofluar 10x 0.3 objective

1

Neutrophil Chemotaxis Assay

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Differentiated neutrophils were resuspended in HBBS with 20 mM HEPES and 0.5% FBS, and loaded into collagen-coated IBIDI chemotaxis μ-slides, which were then incubated at 37°C for 30 min for cells to attach. 15 μL of 1000 nM fMLP was loaded into the right reservoir yielding a final fMLP concentration of 187 nM. Cell migration was recorded every 60 s for a total of 120 min using LSM 710 (with Ziess EC Plan-NEOFLUAR 10X/0.3 objective) at 37°C. Cells were tracked with ImageJ plug-in MTrackJ.
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2

Neutrophil Chemotaxis Assay in μ-Slide

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Differentiated HL-60 cells were resuspended in HBSS with 20mM HEPES and 0.5% FBS and loaded in collagen-coated IBIDI chemotaxis μ-slides (ibidi # 80326) and incubated at 37°C for 30 minutes to allow cells to adhere. 15 ul of 1000 nM fMLP was loaded into the right reservoir yielding a final fMLP concentration of 187 nM. Cell migration was recorded every 60 sec for 120 minutes using LSM 710 (with Ziess EC Plan-NEOFLUAR 10X/0.3 objective) at 37°C. Cells expressing Dendra2 with initial position on the left half of the channel were tracked with ImageJ plug-in MTrackJ as previously described (Meijering et al., 2012 (link)). Velocity and chemotaxis index were quantified using the ibidi cell migration tool.
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3

Neutrophil Chemotaxis Assay

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Differentiated neutrophils were resuspended in HBBS with 20 mM HEPES and 0.5% FBS, and loaded into collagen-coated IBIDI chemotaxis μ-slides, which were then incubated at 37°C for 30 min for cells to attach. 15 μL of 1000 nM fMLP was loaded into the right reservoir yielding a final fMLP concentration of 187 nM. Cell migration was recorded every 60 s for a total of 120 min using LSM 710 (with Ziess EC Plan-NEOFLUAR 10X/0.3 objective) at 37°C. Cells were tracked with ImageJ plug-in MTrackJ.
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4

Motility Assay of Cells in Polyglutamate Chambers

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Cells were grown to ~1×106 cells/ml and loaded into polyglutamate-coated motility chambers33 (link) sealed with Vaseline. Thirty second videos were acquired under dark-field illumination at ~40 frames per second (fps) using a Hamamatsu ORCA-Flash 4.0 camera on a Zeiss Axio Imager A2 microscope with an EC Plan-Neofluar 10x/0.3 objective lens and Zen 2.6 Pro software. At least five videos were collected for each independent biological replicate. Single cell tracking and mean squared displacement were performed in MATLAB as previously described for fluorescent parasites33 (link). For “high density” motility analyses, cells were grown to ~1×107 cell/ml, then diluted in conditioned medium to ~1×106 cells/ml and analyzed as above.
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5

Multicolor Confocal Imaging Protocol

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Confocal images were acquired with an EC Plan-Neofluar 10X/0.3 objective mounted on an inverted LSM 700 microscope (Zeiss). Hoescht 33342 was excited with laser excitation at λ = 405. Alexa Fluor® 555 and Alexa Fluor® 594 were excited with laser excitation at λ = 555. The main beam splitter was MBS 405/488/555/639, and the SP 555 filter used to collect emission from all fluorophores. To separate the emission from Alexa Fluor® 555 and Alexa Fluor® 594 fluorophores, dichroic beam splitters were used at 559 nm and 628 nm in the respective channels. All confocal images were captured with identical settings (Table 1).
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6

Visualizing Mineral Deposition in Mice

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Mineral deposition was evaluated by intraperitoneal injections of calcein (Sigma # C0875; 2.5 mg/kg body weight) and alizarin complexone (Sigma # a3882; 7.5 mg/kg) into pregnant females and, postnatally, into cubs. Two mice were used for each injection regime. Prenatally harvested limbs were fixated overnight in 4% PFA/PBS, dehydrated to 100% ethanol, embedded in paraffin and sectioned at a thickness of 7 μm. Postnatally harvested limbs were fixated 24 h in 4% PFA/PBS and gradually dehydrated from 70% ethanol to 100% ethanol twice for 48 h each time. Then, samples were infiltrated and embedded in JB-4 Embedding Kit (Electron Microscopy Science #14270–00) and sectioned longitudinally at a thickness of 7 μm. Fluorescence was visualized by confocal microscopy.
Confocal imaging was performed using a Zeiss LSM 510 upright confocal microscope (Carl Zeiss, Jena, Germany) with an EC Plan-Neofluar 10x/0.3 objective, NA 1.0. Calcein fluorochrome was excited with a 488 nm argon laser and alizarin with 561 nm argon laser. Following imaging, all images of the same section were stitched using Microsoft Image Composite Editor (version 1.4.4.0). Contrast was increased by using the “auto contrast” tool of Google Picasa (version 3.9.137) and Matlab’s “imadjust” function.
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7

Quantifying Plasmodium Liver Infection

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C57BL/6 mice were inoculated i.v with 150,000 WT PbANKA or IL-6 Tg-PbANKA/LISP2 SPZ and livers were harvested at 24 h and 40 h post-infection. EEF density and dimensions were determined by microscopy on freshly dissected livers using a spinning-disk confocal system (UltraView ERS, Perkin Elmer) controlled by Volocity (Perkin Elmer) and composed of 4 Diode Pumped Solid State Lasers (excitation wavelengths: 405 nm, 488 nm, 561 nm and 640 nm), a Yokogawa Confocal Scanner Unit CSU22, a Z-axis piezoelectric actuator and a Hamamatsu Orca-Flash 4.0 camera mounted on a Axiovert 200 microscope (Zeiss). Z-stacks of images spaced 3 µm apart and covering 18 to 60 µm were acquired using a EC Plan-NEOFLUAR 10x/0.3 objective (Zeiss) or a Plan-APOCHROMAT 63x/1.4 oil objective (Zeiss). Image analysis was performed with the Fiji software (14 (link)). Z-stacks were converted to maximum intensity projections and the resulting images were segmented using the pre-implemented Triangle algorithm. EEFs were manually selected with the Magic Wand tool to determine their dimensions (area, Feret’s diameter).
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8

Embryo Cryosectioning and Confocal Imaging

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Pregnant females were sacrificed by carbon dioxide asphyxiation at day 11.5 postcoitus (e11.5). Embryos were dissected and fixed in 4% paraformaldehyde for 1 h, cryoprotected in 15% and 30% sucrose in PBS and embedded in optimal cutting temperature (OCT) compound (Sakura Finetek, Torrance, CA, USA) before cryosectioning at 10 μM. The sections were mounted on SuperFrost Plus slides (Thermos Fisher Scientific, Houston, TX, USA) using Vectashield (Vector Labs, Burlingame, CA, USA).
Images were obtained using a Zeiss LSM 510 META confocal laser scanning microscope (Carl Zeiss MicroImaging, Thornwood, NY, USA). Each tissue section was initially centered manually using a Carl Zeiss EC Plan-Neofluar 10x/0.3 objective. Sections were tile scanned using a 5 × 8 grid pattern (at 898.24 μm2/grid) allowing for a resolution of 512 × 512 pixels per field at a depth of 28.29 μm.
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9

Quantification of Primordial Germ Cells in blm+/-;Tg(ddx4:egfp) Zebrafish

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The offspring of blm +/-;Tg(ddx4:egfp) fish were raised to 5-6 mm standard length and were fixed in 4 % PFA in PBS. Larvae were screened for GFP expression under a Zeiss SteREO Lumar.V12 microscope equipped with a NeoLumar S 0.8x objective and a CoolLED pE-300lite light source. GFP-positive specimens were embedded in 2 % low melting point agarose gel and were imaged under a Zeiss Axio Imager M2 upright microscope with semi-confocal ApoTome 2.0 using an EC Plan-NeoFluar 10x 0.3 objective and a Colibri 7 LED light source. Standard length was measured following imaging procedures. PGCs were manually enumerated in Zeiss ZEN.
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10

Masson's Trichrome Staining for Tissue Analysis

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Samples of hrATs+hMVECs and hrATs-hMVECs from the different experimental groups treated for 6 days were fixed for 24 h in a 3.7% buffered formalin solution and were embedded in paraffin for histological analysis. Masson's trichrome staining was performed on 5 µm-thick tissue cross-sections to highlight the extracellular matrix (blue) and the cells (pink). Two samples were photographed (2 brightfield images per sample) for each tissue (n = 2-3 tissues per condition, ASCs #2) using an Axio Imager.M2 microscope equipped with an AxioCam ICc1 camera, an EC Plan-Neofluar 10x/0.3 objective and the AxioVision software v4.8.2.0 (Zeiss, Toronto, ON, Canada). Thickness measurements were performed using the ImageJ software version 1.48r (Wayne Rasband, National Institutes of Health, Bethesda, MD, USA). Three measurements were performed on each picture for a total of 12 measurements for each tissue.
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