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7 protocols using mgcl2

1

Purification of Full and Empty rAAV Particles

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The final purification step to separate the full and empty rAAV particles was performed with the CIMmultus QA column (1 mL, 2-µm pores; BIA separations). The peak containing fractions from the CEX or AC elutions were pooled and diluted 30-fold with 20-mM Tris (Sigma-Aldrich Chemie GmbH, Steinheim, Germany) and 2-mM MgCl2 (Applichem GmbH, Darmstadt, Germany) and adjusted to pH 9.0. Required starting conductivity for the AEX was around 3–5 mS/cm. After column equilibration with 20-mM Tris and 2-mM MgCl2, pH 9.0, the loading of the diluted sample was done at a flow rate of 6 mL/min. Elution was performed at a 3-mL/min flow and a gradient ranging from 5% to 50% 20-mM Tris, 2-mM MgCl2, and 500-mM NaCl, pH 9.0, within 60 CVs. The column was cleaned in the cleaning in place (CIP) mode with 1-M NaOH and 2-M NaCl after each run [23 ,24 (link)].
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2

Biochemical Characterization of Enzyme Activity

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IPTG, ATP, HEPES and MgCl2 were purchased from AppliChem. TCEP was purchased from Carl Roth. Desulfo-coenzyme A and AMP were purchased from Jena Bioscience. AF546 maleimide and inorganic pyrophosphatase were purchased from Thermo Fisher Scientific. Ni-NTA agarose was purchased from Cube Biotech GmbH. Oligonucleotides were purchased from Biolegio. Other chemicals were purchased from AppliChem, Roth or Thermo Scientific. Experimental data were analyzed and fitted using GraphPad Prism 7.
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3

Cannabinoid Receptor Signaling Pathway

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THC was obtained from Lipomed (Weil am Rhein, Germany). O-1602 and PD98059 were bought from R&D Systems (Wiesbaden-Nordenstadt, Germany). AM-251 and AM-630 were purchased from Biomol GmbH (Hamburg, Germany). Dulbecco's Modified Eagle's medium (DMEM, high glucose, GlutaMAXTM), trypsin-EDTA and penicillin-streptomycin were obtained from Life Technologies GmbH (Darmstadt, Germany). Fetal calf serum (FCS) was from PAN Biotech (Aidenbach, Germany). Dimethyl sulfoxide (DMSO), EDTA, glycerol, glycine, H2O2, HEPES, MgCl2, NaCl, sodium dodecyl sulphate and Tris were bought from AppliChem GmbH (Darmstadt, Germany). Aprotinin, capsazepine, HCl, leupeptin, luminol, orthovanadate, para-cumaric acid, phenylmethylsulfonyl fluoride (PMSF) and Triton® X-100 were obtained from Sigma-Aldrich (Taufkirchen, Germany). Milk powder was obtained from Bio-Rad Laboratories GmbH (Munich, Germany). Tween® 20 was purchased by Carl Roth GmbH (Karlsruhe, Germany).
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4

Midazolam Metabolism Regulatory Factors

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Midazolam, 4-hydroxyMidazolam (4OH-MDZ), nicotinamide adenine dinucleotide 2′-phosphate (NADPH), dimethylsulfoxide (DMSO), 40% acrylamide solution, sodium dodecyl sulfate (SDS), and Tween 20 were purchased from Sigma-Aldrich Italy (Milan, Italy). 1’-hydroxyMidazolam (1’OH-MDZ) was purchased from SPIBio Bertin Pharma (Montigny le Bretonneux, France). Ultrapure water was obtained with Pure-Lab Option Q apparatus (Elga Lab Water, High Wycombe, United Kingdom). Sucrose, Tris and MgCl2 were purchased from Applichem (Chicago, IL, United States). HPLC-grade methanol was purchased from Scharlau (Barcelona, Spain). Rabbit polyclonal anti-PXR, rabbit polyclonal anti-CAR, mouse anti-CYP3A1, rabbit anti-CYP3A2 and HRP-conjugated anti-mouse IgG antibodies were obtained from Abcam (Cambridge, United Kingdom). HRP-conjugated anti-rabbit IgG were obtained from Millipore (Billerica, MA, United States), and HRP-conjugated anti-goat IgG from Jackson Immuno Research (West Grove, PA, United States). Rabbit polyclonal anti-calnexin, rabbit polyclonal anti-GAPDH and goat polyclonal anti-acetyl histone H3 antibodies were purchased from Santa Cruz Biotechnology (Santa Cruz, CA, United States).
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5

Calcium Imaging of Micropatterned Networks

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Isolated MP networks were carefully resuspended in 5 μl collagen N gel (Amedrix, Esslingen, Germany). The MP network/collagen suspension was plated out as a thin layer on a 35 mm petri dish with a glass bottom (Greiner Bio-One) in order to fix the MP networks in one plane. The MP networks were carefully dispersed with forceps if necessary. The samples were incubated 30 min at 37°C for polymerization of the collagen N gel. Then the networks were washed three times with recording buffer. The recording buffer was composed of 150mM NaCl (Applichem), 5mM KCl (Roth), 2mM CaCl2 (Applichem), 1mM MgCl2 (Applichem), 10mM Hepes (Sigma Aldrich) and 1,5 g/LGlucose (Applichem). The staining solution consisting of recording buffer, 200 μg/ml Pluronic (Sigma Aldrich) dissolved in DMSO (Applichem), 2 μg/ml Fluo-8 (AAT Bioquest) dissolved in DMSO and 0,5% FCS (PAN) was added for 30 min at RT protected from light. The MP networks were again rinsed three times in recording buffer and used for the measurements. Potassium chloride was used for depolarization. The measurement was carried out with the CellObserver Z1 using the Physiology module of the Axiovision software (Zeiss).
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6

Dopamine Receptor Ligand Binding Assay

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The assay buffer consisted of MilliQ water, 11 mM Na-HEPES (pH = 7.4) (Sigma-Aldrich), 135 mM NaCl (AppliChem), 1 mM CaCl2 (AppliChem), 5 mM KCl (AppliChem), 1 mM MgCl2 (AppliChem), protease inhibitor cocktail (according to the manufacturer’s description, Roche) and 0.1% Pluronic® F-127 (Sigma-Aldrich). Dithiothreitol (DTT) (AppliChem) was added to the assay buffer for experiments with Dopamine and apomorphine with an end concentration of 1 mM.
D3 receptor ligands 7-hydroxy-DPAT hydrobromide were purchased from TOCRIS and Spiperone (Sigma S7395), Haloperidol (Sigma H1512), Dopamine, apomorphine, and Butaclamol were from Sigma-Aldrich. The fluorescent ligand CELT-419, its pharmacophore P-165 and pharmacophore with linker PL-384 were kindly provided by Celtarys Research. Stock solutions of these ligands were prepared in DMSO (Applichem) or Milli-Q water in the case of Dopamine.
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7

Muscarinic Receptor Ligand Assay Protocol

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Assay buffer consisted of MilliQ water, 135 mM NaCl (AppliChem, Darmstadt, Germany), 1 mM CaCl2 (AppliChem), 5 mM KCl (AppliChem), 1 mM MgCl2 (AppliChem), 11 mM Na-HEPES (pH = 7.4) (Sigma-Aldrich, Taufkirchen, Germany), protease inhibitor cocktail (according to the manufacturer's description, Roche, Basel, Switzerland) and 0.1% Pluronic F-127 (Sigma-Aldrich).
Muscarinic acetylcholine receptor ligands acetylcholine, arecoline, pirenzepine, pilocarpine, atropine and scopolamine were purchased from Sigma-Aldrich and carbachol from Tocris Bioscience (Abingdon, UK). The syntheses of the fluorescent ligands UR-MK342 and UR-CG072 [16 (link)] and the dualsteric M2R ligands UR-SK59 [50 (link)], UR-SK75 [50 (link)] and UNSW-MK259 [51 (link)], showing also high M4R affinity, were described previously. All ligand stock solutions were prepared using cell culture grade DMSO (AppliChem) and stored at −20°C.
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