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10 protocols using ab45174

1

Comprehensive Immunohistochemistry Protocol

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IHC was conducted according to the protocol of the Two-step IHC Kit (ZSGB-BIO). Briefly, 4 µm thick slides of paraffin-embedded tissue specimens were processed for antigen retrieval with citric acid buffer (0.01 M, pH 6.0), and endogenous peroxidase activity was quenched with 3% hydrogen peroxide solution. Then, the slides were blocked with 10% bovine serum albumin and incubated overnight at 4 °C with the following primary antibodies: anti-MED15 (1:50; 11566-1-AP; Proteintech), anti-SREBP1 (1:100; AF6283; Affinity), anti-SREBP2 (1:100; ab30682; Abcam), anti-FASN (1:50; DF6106; Affinity), anti-ACC1 (1:100; ab45174; Abcam), anti-ACLY (1:100; ab40793; Abcam), anti-SCD1 (1:100; #2794; CST), anti-PLK1 (1:50; DF7004; Affinity), and anti-Ki67 (1:200, BS-2130R; Bioss). The slides were incubated with biotinylated goat anti-rabbit IgG (1:200) for 1 h at room temperature. DAB (ZLI-0918, ZSBio, China) was used to visualize the immune complexes, and the sections were counterstained with hematoxylin. Immunostaining intensity was measured using ImageJ software (National Institutes of Health, Bethesda, MD) as previously described [56 (link)].
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2

Hepatocyte Protein Expression Analysis

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Hepatocytes were harvested and washed twice in ice-cold PBS. Total cellular protein was extracted using a protein extraction kit according to the manufacturer's instructions. Aliquots of 60 μg total protein were denatured for 5 min at 100°C and loaded on 10% sodium dodecyl sulfate polyacrylamide gels and electro-transferred onto polyvinylidene difluoride (PVDF) membranes. After incubation with blocking buffer, membranes were exposed to polyclonal GRP78 (78 kD, 1:250, sc-376768; Santa Cruz, CA), SREBP-1c (68 kD, 1:1000; NB100-2215; Novus, USA), FAS (273 kD, 1:1000; C2065; Cell Signaling, Danvers, MA, USA), SORT1 (85 kD,1:1000; ab16640, Abcam, Cambridge, MA), P65 (65 kD, 1:1000; D14E12; Cell Signaling; Danvers, MA, USA), ACC1 (265 kD, 1:1000; ab45174, Abcam, Cambridge, MA), CHOP (27 kD, 1:1000; L63F7; Cell Signaling, Danvers, MA, USA), PCSK9 (65–80 kD, 1:1000; 85813, Cell Signaling; Danvers, MA, USA), SCD1 (37 kD, Cell Signaling; Danvers, MA, USA). After washing and incubation with secondary antibody, immunoreactive bands were detected by enhanced chemiluminescence (Beyotime, China) solution. The imprinting was exposed with X-ray film to radiograph the spectral band, and the gray value of the spectral band was measured with bandscan software version 5.0 (prozyme Inc, San Leandro, CA). Protein abundance is reported relative to that of β-actin as a ratio of optical densities.
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3

Western Blot Analysis of Lipid Metabolism Proteins

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Total protein was extracted using RIPA protein lysis buffer (Beyotime Biotech, Jiangsu, China) with PMSF and complete protease and phosphatase inhibitor cocktail. Protein concentrations were determined by a BSA kit (Beyotime Biotech, Jiangsu, China). Fifty micrograms of protein was separated by gel electrophoresis and transferred to methylcellulose membranes. The membranes were blocked in 5% nonfat dried skimmed milk for 2 hours at room temperature and incubated overnight at 4 °C with the following primary antibodies: anti-HIF-2α (1:1000; #59973; CST), anti-MED15 (1:1000; 11566-1-AP; Proteintech), anti-SREBP1 (1:200; sc-13551; Santa Cruz), anti-SREBP2 (1:500; ab30682; Abcam), anti-FASN (1:1000; ab128870; Abcam), anti-ACC1 (1:1000; ab45174; Abcam), anti-ACLY (1:1000; ab40793; Abcam), anti-SCD1 (1:1000; #2794; CST), anti-PLK1 (1:1000; #4513; CST), Phospho-AKT (Ser473) (1:1000; AF0016; Affinity), AKT (1:1000; AF6261; Affinity), and anti-GAPDH (1:1000, #2118; CST). The membranes were incubated with secondary antibodies for 2 hours after being washed with tris-buffered saline and Tween 20 and were visualized by an enhanced chemiluminescence kit (Biological Industries, Israel).
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4

Osteoarthritis Chondrocyte Inflammation Assay

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We purchased aspirin (V900185), LPS (Escherichia coli 0111:B4), and phosphate-buffered saline (PBS) from Sigma-Aldrich (St. Louis, Missouri, USA). A 2′,7′-dichlorodihydrofluorescein diacetate (DCFH-DA) fluorescent probe (Beyotime Institute of Biotechnology, Shanghai, China) was used to assess intracellular ROS production, and 5-aminoimidazole-4-carboxamide ribonucleotide (AICAR) and compound C were purchased from Selleck Chemicals (Shanghai, China). Additionally, we purchased rabbit anti-rat collagen type II (COL2; ab34712), MMP-3 (ab13533), MMP-13 (ab39012), IL-1β (ab9722), TNF-α (ab6671), AMPK (ab32047), phospho-AMPK (p-AMPK; ab133448), acetyl-CoA carboxylase (ACC; ab45174), phospho-ACC (p-ACC, ab68191), nitric oxide (NO) synthase (iNOS; ab15323), cyclooxygenase-2 (COX-2; ab15191), and nuclear factor (erythroid-derived 2)-like 2 (Nrf-2; ab137550) antibodies, as well as goat anti-rabbit immunoglobulin G (IgG) heavy+light chain (H&L) Alexa Fluor 488 (ab150077) and Alexa Fluor 647 (ab150079) from Abcam (Cambridge, UK). Anti-β-actin and 4′,6-diamidino-2-phenylindole (DAPI) were purchased from Beyotime. Aggrecan (bs-1223R), ADAMTS-4 (bs-4191R), and ADAMTS-5 (bs-3573R) were purchased from Bioss (Beijing, China).
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5

Western Blot Analysis of Metabolic Regulators

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Cell lysates were prepared using radioimmunoprecipitation assay (RIPA) buffer. The samples were separated by SDS-PAGE, transferred to a polyvinylidene fluoride membrane, and immunoblotted with the following antibodies: acetyl coenzyme A carboxylase (ACC, Ab45174, Abcam), phospho-ACC (Ser79) (Ab68191, Abcam), sodium-coupled glucose cotransporter 2 (SGLT2, ab37296, Abcam), adenosine monophosphate activated protein kinase α (AMPKα, CST5832, Cell Signaling Technology), phospho-AMPKα (Thr172) (CST50081, Cell Signaling Technology), cyclin A2 (CCNA2, ET1612-26, Huabio, China), cyclin D1 (CCND1, ET1601-31, Huabio, China), cleaved caspase-3 (CST9661, Cell Signaling Technology), and GDH1 (ab166618, Abcam). After incubation of the membranes with peroxidase-conjugated secondary antibodies (Cell Signaling Technology), bands were visualized using enhanced chemiluminescence reagents (Bio-Rad, USA).
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6

Western Blot Analysis of Adipogenic Proteins

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Protein lysates were generated using RIPA buffer with PMSF (P0013B, Beyotime) and protein concentrations quantified by BCA Protein Assay (P0028, Beyotime). Lysates were loaded on 8–12% SDS-PAGE gels and transferred onto PVDF membranes (1620177, Bio-Rad Laboratories, Hercules, CA, USA). After 5% BSA blocking, the membrane was probed with primary antibodies to GATA6 (SAB2100899, 1 mg/mL, Thermo Fisher Scientific), Caveolin-1 (ab32577, 1:1000, Abcam), PKA (SAB4502337, 1 mg/mL, Thermo Fisher Scientific), pPKA (SAB4503969, phosphorylation site of Thr197, 1 mg /mL, Thermo Fisher Scientific), CREB (ab32515, 1:500, Abcam), pCREB (ab32096, phospho S133, 1:5000, Abcam), ATGL (ab207799, 1:1000, Abcam), pHSL (SAB4503879, phosphorylation site of Ser552, 1 mg/mL, Thermo Fisher Scientific), HSL (SAB4501762, 1 mg/mL, Thermo Fisher Scientific), FAS (ab82419, 1: 1000, Abcam), PPAR-γ (ab209350, 1:500, Abcam), pACC (ab68191, phospho S79, 1:5000, Abcam), ACC (ab45174, 1:1000, Abcam) and GAPDH (ab8245, 1:500, Abcam). Afterwards, the membrane was incubated with HRP-conjugated secondary antibody goat anti-rabbit IgG (ab6721, 1: 5000, Abcam) for 1 min at room temperature. ECL reagent (1705062, Bio-Rad) was used for visualization, with GAPDH used as an internal reference.
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7

Western Blot Analysis of Lipid Metabolism Proteins

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After treatment, the cells and the mouse lung tissues were lysed by RIPA with protease phosphate inhibitor. The proteins were separated by 10% SDS-PAGE and electrotransferred to a Polyvinylidene Difluoride (PVDF) membrane. The PVDF membrane was blocked for 2 h at room temperature with 5% BCA and incubated overnight with rabbit or mouse polyclonal antibodies against GAPDH (CW0100M, CWBIO, China), ACTIN (CW0096, CWBIO, China), ACACA (ab45174, Abcam, UK), FASN (ab22759, Abcam, UK), SCAP (ab190103, Abcam, UK), Collage I (ab138492, Abcam, UK), Vimentin (ab92547, Abcam, UK) and SREBP1 (sc-365513, SCBT-Santa, Japan) at 4 °C. After washing with PBST for 0.5 h, the PVDF membrane was incubated for 2 h with antibody-conjugated goat anti-rabbit IgG or anti-mouse IgG. The PVDF membrane was washed with PBST and then visualized via a protein imaging system.
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8

Modulation of AMPK and Autophagy Pathways

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EGCG (PHL89656), Dox (D1515), ferrostatin-1 (Fer-1, S7243), dexrazoxane (Dxz, 05587), 3-methyladenine (3-MA, S2767), A769662 (SML2578), MitoTEMPO (SML0737), compound C (P5499), bromodeoxyuridine (BrdU, B5002), and bafilomycin A1 (BafA1, S1413) were purchased from Sigma-Aldrich. Primary antibodies against NADH-ubiquinone oxidoreductase subunit B8 (NDUFB8, ab110242), ubiquinol-cytochrome c reductase core protein 2 (UQCRC2, ab203832), AMPKα2 (ab97275), p-AMPKα2 (S173, ab55886), acetyl-CoA carboxylase (ACC, ab45174), and p-ACC (S79, ab68919) were obtained from Abcam. Primary antibodies against prostaglandin-endoperoxide synthase 2 (PTGS2, 12282), glutathione peroxidase 4 (GPX4, 52455), microtubule-associated protein 1A/1B-light chain 3 (LC3-I/II, 43566), P62 (23214), mammalian target of rapamycin (mTOR, 2983), p-mTOR (S2448, 5536), unc-51 like autophagy activating kinase 1 (ULK1, 8054), p-ULK1 (S757, 14202), GAPDH (2118), β-actin (3700), anti-rabbit IgG (7054), and anti-mouse IgG (7076) were purchased from Cell Signaling Technology. Adenovirus vector expressing short hairpin RNA targeting AMPK (pAD/AMPK-shRNA) was purchased from Gene Chem Co., Ltd.
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9

Western Blot Analysis of Cellular Proteins

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Equal amounts of proteins were separated on a 10% pre-cast SDS-PAGE (Genscript, Nanjing, China), and then transferred to polyvinylidene difluoride (PVDF) membranes (PALL Life Sciences, USA). The membranes were blocked with 5% milk in TBST (TBS with 0.1% Tween-20) for 1 h at room temperature, and then incubated overnight at 4 ℃ with primary antibodies: anti-Rbbp4 antibody (Proteintech, 20364-1-AP), anti-Tcea1 antibody (Proteintech, 17825-1-AP), anti-ILF2 antibody (Proteintech, 14714-1-AP), anti-NPM1 antibody (Proteintech, 10306-1-AP), anti-Acc1 antibody (abcam, ab45174), anti-Fasn antibody (abcam, ab128870), anti-Srebp1c antibody (abcam, ab28481), anti-Acox1 antibody (abcam, ab184032), anti-Cpt1α antibody (abcam, ab128568), anti-Flag antibody (Proteintech, 20543-1-AP), anti-GAPDH antibody (abcam, ab8245), anti-β-actin antibody (Proteintech, 66009-1-Ig). The membranes were washed and incubated with horseradish peroxidase-conjugated secondary antibodies for 1 h. Protein bands were visualized using enhanced chemiluminescence kit (UUbio, Suzhou, China) with a Tanon 5200 multi-imaging system (Tanon Technology Co., Ltd, Shanghai, China).
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10

Comprehensive Protein Expression Analysis

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Total protein samples were isolated from liver tissue and cells cultured using RIPA lysis buffer (Thermo Fisher Scientific, USA) containing protease and phosphatase inhibitors (Roche, Basel, Switzerland). Samples were separated by 10% SDS-polyacrylamide gel electrophoresis and transferred onto polyvinylidene difluoride membranes (Millipore, CA). The membranes were blocked in 5% milk and incubated with primary antibodies against mTOR (2983T), p-mTOR (5536T), p70S6 (9234), S6 (2217), pS6 (2211), TLR2 (13744), pNF-κBp65 (3033), NF-κBp65 (4764), NF-κBp50 (13586) and β-actin (4970) (CST, USA) at 1:1000 in TBST. Antibodies against PPAR-α (ab24509), SREBP-1 (ab28481), FASN (ab22759), ACC1 (ab45174), S6K1 (ab32529) and Caspase-1 (ab1872) were obtained from Abcam (Cambridge, USA). The intensity of the bands was analyzed by scanning densitometry and quantified by NIH Image J software. For protein expression, the specific band intensity was quantified, normalized to those of β-actin, and presented as a value relative to the control.
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