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Antibiotics and antimycotic

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Antibiotics and antimycotics are a class of laboratory products used to control the growth of bacteria and fungi in cell culture and microbiology applications. These products include a variety of compounds that inhibit the growth or kill microorganisms, providing a means to maintain sterile and contamination-free environments for research and testing purposes.

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25 protocols using antibiotics and antimycotic

1

Characterization of Lung Cell Lines

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The A549 (CCL-185) and Beas-2B (CRL-9609) cell lines were obtained from the American Type Culture Collection (Washington, DC, USA). The R3/1 and RLE6TN cell lines were a gift from Dr Jacob Finkelstein (University of Rochester, Rochester, NY, USA).21 (link),39 (link) The Pulmonary Artery Smooth Muscle Cells were obtained from Dr Paul Babal (University of South Alabama, Mobile, AL USA). Primary rat alveolar epithelial cells were isolated as previously described.20 (link) ATII cells were collected and cultured on glass coverslips either with or without pre-treatment with 50 μg ml−1 Matrigel (BD Biosciences, San Jose, CA, USA). All cells were maintained in Dulbecco’s modification of Eagle’s medium containing 10% fetal bovine serum and supplemented with antibiotics and antimycotics (Gibco, Carlsbad, CA, USA), except for R3/1 cells, which were grown in RPMI 1640 containing 10% fetal bovine serum and supplemented with antibiotics and antimycotics (Gibco). All cells were cytoplasmically microinjected using an Eppendorf Femtojet system (Hamburg, Germany) as previously described.40 (link) Purified protein-free DNA was suspended in phosphate-buffered saline and injected at a concentration of 0.5 mg ml−1, which corresponds to roughly 20 000 plasmids per injected cell.
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2

Culture of Human Cell Lines

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Human umbilical vein endothelial cells (HUVEC) and human mammary epithelial cells (HMEC) were obtained from Thermo Fisher Scientific, whereas HS-5 cells were obtained from ATCC (LGC Standards, Łomianki, Poland). HUVEC cells were maintained in Human Large Vessel Endothelial Cell Basal Medium or Human Large Vessel Endothelial Cell Basal Medium without phenol red supplemented with low-serum Large Vessel Endothelial Supplement (LVES) (Thermo Fisher Scientific) and antibiotics and antimycotics (Thermo Fisher Scientific), whereas HMEC cells were maintained in HuMEC Basal Serum-Free Medium supplemented with HuMEC Supplement Kit (Thermo Fisher Scientific) and the antibiotic and antimycotic penicillin/streptomycin (Thermo Fisher Scientific). HS-5 cells were maintained in Human Fibroblast Expansion Basal Medium (Medium 106) supplemented with Low-Serum Growth Supplement (LSGS) (Thermo Fisher Scientific) and antibiotics and antimycotics (Thermo Fisher Scientific). Cells were maintained at 37 °C in a humidified atmosphere of 5% CO2 and 95% air.
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3

Anticarsia gemmatalis Cell Line Protocol

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The insect cells UFL-Ag-286 [43 (link)] were grown at 27 °C in GRACE’s medium (Invitrogen, Carlsbad, CA, USA) containing 10% v/v fetal bovine serum (FBS; GBO, Kremsmünster, Austria) and supplied with antibiotics and antimycotics (Invitrogen). Initial stocks of AgMNPV-2D [44 (link),45 (link)] were multiplied in Anticarsia gemmatalis (third instar larvae) by per os infection using OBs, and by the exposition of monolayers of UFL-Ag-286 cells with BVs in plastic tissue culture flasks. The virus stocks used in all experiments were tittered by plaque assay [46 (link)] in UFL-Ag-286 cells and maintained as culture supernatants.
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4

Sterilization and Characterization of Biomaterial Scaffolds

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Each disc of PCL or HAp-PCL was sterilized by a fully automated ethylene oxide gas sterilizer (SA-N160, Iki Co., Otsu, Japan). The rBMSCs were collected and cultured from the tibia and femur of 6-week-old male F344 rats according to the protocol in the previous article [49 (link)], and cells with the passage numbers of 3 and 4 were used for in vitro cell-based studies. The rBMSCs were cultured with α-MEM (FUJIFILM Wako Co., Osaka, Japan) containing 20% fetal bovine serum (FBS, Cytiva, Tokyo, Japan) and 1% antibiotics and antimycotics (Gibco Invitrogen, Carlsbad, CA, USA). The cells (3 × 104 cells) were seeded onto each disc (PCL or HAp-PCL), and the discs were placed in a 24-well plate. The DNA concentration of cells 6, 12, and 24 h after seeding were measured using the Quant-iT™ PicoGreen™ dsDNA Assay Kit (Thermo Fisher Scientific Inc., Waltham, MA, USA) according to the manufacturer’s instruction. After seeding rBMSCs on each disc (PCL or HAp-PCL) for 24 h, viability was assessed using the LIVE/DEAD Viability/Cytotoxicity Kit (Thermo Fisher scientific Inc., Waltham, MA, USA) according to the manufacturer’s instruction. The stained cells were observed by confocal laser fluorescence microscope (LSM-700, Zeiss Microscopy, Jena, Germany). Each experiment was performed in triplicate.
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5

Differentiation of iNSCs into Neurons

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iNSCs were plated at 5000 cells per well on several 8-well chamber slides or 48-well plates, previously coated using recombinant human laminin. Then the iNSC were incubated neural differentiation media containing Neurobasal Media (Invitrogen) supplemented with N2 (1X, Invitrogen), B27 (1:50, Invitrogen), and 1% antibiotics and antimycotics (Invitrogen) for 21 days.
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6

Modulating mTOR, NF-κB Signaling in HEK293

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HEK293 cells were cultured in Dulbecco's modified Eagle's medium (DMEM) supplemented with 10% fetal bovine serum (FBS, Gibco), and antibiotics and antimycotics (Invitrogen), and were counted using a TC-20 cell counter (Bio-Rad). Cells were transfected with 50 nM of control siRNA (siCTRL) or siRNAs targeting mTOR, NF-κB1 or RelA using Lipofectamine 2000 (Thermo Fisher Scientific). Lentiviral particles delivering either GRSF1-specific (TL312593V, OriGene) or scrambled control (TR30021V, OriGene) shRNA were transduced into HEK293 cells in the presence of 8 μg/mL of Polybrene with a MOI (Multiplicity of infection) of 20. Three days after transduction cells were maintained in culture media supplemented with 3 μg/mL of Puromycin (Santa Cruz Biotechnology). Rapamycin (R8781, Sigma) was added into the culture medium of HEK293 cells (25 or 50 nM).
HEK293 cells stably expressing RelA (LR-7008)- or IL-6 (SL-0048-NP)-responsive luciferase reporter were purchased (Signosis), and the luciferase activity was determined by Dual-Luciferase® reporter assay system according to the manufacturer's instruction (Promega).
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7

Cultivation of Sf9 and 293TT Cells

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Spodoptera frugiperda 9 (Sf9) insect cells were propagated at 28°C in Sf-900 II medium (Invitrogen, Carlsbad, CA, USA) supplemented with antibiotics and antimycotics (Invitrogen). 293TT cells were cultured in Dulbecco's modified Eagle medium (DMEM) supplemented with 10% fetal bovine serum (FBS), hygromycin B (400 µg/ml; Invitrogen) and 1% penicillin/streptomycin (Gibco, Grand Island, NY, USA).
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8

Time-lapse Imaging of Developing Sternum

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B6.129(Cg)-Gt(ROSA)26Sortm4(ACTB-tdTomato,-EGFP)Luo/J mice were crossed to FVB.Cg-Tg(CAG-cre/Esr1)5Amc/J mice (Jackson Lab). E10.5 pregnant mice were intraperitonially injected with tamoxifen at dose of 1.2 mg per mouse. The sterna were collected from GFP-positive E12.5 embryos, the skin and most of the rib was removed. Sternums were cultured on Costar Transwell inserts (#3,450) ventral side down in DMEM/F12 (Gibco, Cat. #11,320) with 10% fetal bovine serum plus antibiotics and antimycotics (Gibco, Cat. # 15,240). Live imaging was performed using PerkinElmer spinning disc confocal microscopy at 37 °C and in 5% CO2. Images were taken at time intervals of 5 min for up to 10 h. z-Stacks (1.5 or 2 μm) were generated using a × 20 objective lens with long working distance (3.5 mm) and water immersion. Both transmitted light and 488 nm laser were used to visualize sternums contour and individual GFP-positive sternum cells, respectively. Live images were analysed with Volocity software.
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9

Biochemical Analysis of Cell Signaling

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RPMI-1640 medium and fetal bovine serum (FBS) were purchased from HyClone Laboratories (Logan, UT, USA). CRA-1 was acquired from Kyokuto (Tokyo, Japan). Antibiotics and antimycotics were purchased from Gibco BRL (Gaithersburg, MD, USA). Protease inhibitor cocktail was obtained from Roche Diagnostics GmbH (Penzberg, Germany). β-Actin, anti-phosphorylated Syk, Lyn, and NF-κB, and horseradish peroxidase (HRP)-conjugated secondary antibody were bought from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Chemiluminescence detection reagents were acquired from Perkin Elmer (Waltham, MA, USA), and polyvinylidene difluoride (PVDF) membrane was purchased from Millipore (Bedford, MA, USA). 2′7′-dichlorofluorescin-diacetate (DCF-DA) was obtained from Sigma Chemicals (St. Louis, MO, USA). Protease inhibitor cocktail was purchased from Roche (Penzberg, Germany). Enhanced Chemiluminescence detection reagents were procured from Perkin Elmer.
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10

Basophil Activation Assay Protocol

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Human and rat derived basophils, KU812F and RBL-2H3 cells were cultured in RPMI-1640 and DMEM media containing 10% heat-inactivated FBS (Gibco BRL, USA), and antibiotics and antimycotics (Gibco BRL) under 37°C in a humidified atmosphere with 5% CO2, respectively. Additionally, the cells were pretreated with 10, 25, 50, and 100 μg/ml A40 for indicated time and stimulated with 40 nM PMA (Sigma-Aldrich, USA) and 1 μM A23187 (Sigma-Aldrich) (PMACI) for KU812F cells and 10 μg/ml com 48/80 (Sigma-Aldrich) for RBL-2H3 cells under serum-free media.
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