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4 protocols using cd4 pe cy7

1

Expansion of Human Regulatory T Cells

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Recombinant human interleukin (IL)-2 was provided by the National Cancer Institute Biological Resources Branch (Frederick, MD). Phosphorothioate-backboned oligodeoxynucleotides (ODN, 25-bp) with random base pairs were synthesized by Integrated DNA Technologies (Coralville, IA) and used during Treg expansion (13 (link)). Recombinant human FVIII (rFVIII) was kindly provided by Dr. Birgit Reipert (Baxalta, Vienna, Austria). Anti-FVIII A2 monoclonal antibody (4A4) was provided by Dr. Pete Lollar (Emory).Anti-human CD3ε (clone 64.1) and anti-FVIII C2 (2C11) was purified in-house from hybridoma supernatants. Fixable viability dye eFluor 780 was from eBioscience (San Diego, CA).
The following anti-human antibodies for T cell stimulation or for flow cytometry were from the commercial sources: CD28 (clone CD28.2), CD127-PE (clone A019D5), and Helios-PE (clone 22F6) were from BioLegend (San Diego, CA); CD8α-PE-Cy7 (clone RPA-T8), CD4-FITC or PE (clone RPA-T4), CD25-PE-Cy7, CD4-PE-Cy7, and CD45RA violet Fluor 450 were from TONBO Biosciences (San Diego, CA); Foxp3-APC (clone 236A/E7) was from eBioscience; purified anti-chicken ovalbumin (OVA) was from Zymed (San Francisco, CA).
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2

Flow Cytometry Analysis of Immune Cells

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Antibodies and reagents used for flow cytometry were as follows: CD11c-BV421 (585452), MHCII-fluorescein isothiocyanate (FITC) (553623), 7-aminoactinomycin D (7AAD) (51-68981E), CD69-FITC (553236), CD11c-phycoerythrin (PE) (557401), and anti-mouse CD16/CD32 (Fc block) (553142) provided by Becton Dickinson (BD); CD40-allophycocyanin (APC) (20-8050-U025), CD44-V450 (75-0441-U025), CD4-PECy7 (60-0041-U100), CD45.1-PerCPCy5 (65-0453-U500), CD3-FITC (35-0031-U500), CD8-PECy7 (60-0081), and Ghost Red 780 Viability Dye (13-0865-T100) from Tonbo Biosciences; CD4-FITC (130-109-498), CD62L-PerCP-Vio700 (130-107-072), CD25-APC (130-109-052), CD4-PerCPCy5.5 (130-109-497), and CD11c-FITC (130-102-466) provided by Miltenyi; CCR7-PE (120105) and TCRβ-APCCy7 (109220) from BioLegend; and AbC RH capture beads (A10389) and LIVE/DEAD Fixable Yellow Dead Cell Stain (L34968) from Invitrogen. In addition, cell dyes 5-(and-6)-(((4-chloromethyl)benzoyl)amino)tetramethylrhodamine (CMTMR) (C2927) and carboxyfluorescein diacetate succinimidyl ester (CFSE) (C34554) were obtained from Thermo Fisher Scientific, and recombinant murine chemokine MIP-3β (CCL19) (250-27B) was provided by Peprotech.
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3

Comprehensive Multiparameter Flow Cytometry

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Cells were resuspended to a concentration of 1×106 cells/ml. Cells were stained with antibodies CD44-FITC, CD69-PE, CD4-PE/Cy7, CD62L-APC, CD8-vFluor450, CD25-APC/Cy7, CD80-FITC, CD86-PE, CD11b-PE/Cy7, F4/80-APC, IA/E-vFluor 450, GR 1-APC/Cy7, and B220-PerCP/Cy5.5 (Tonbo Bioscience, San Diego, CA) and Zombie Yellow Fixable Viability Kit (BioLegend). Cells were incubated in the dark at room temperature for 30 minutes. Flow cytometry acquisition was performed on a FacsVantage (BD Biosciences, San Jose, CA) and analyzed using FlowJo software (BD Biosciences, San Jose, CA).
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4

Isolation of Lamina Propria Lymphocytes

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Isolation of lamina propria (LP) lymphocytes was performed according to adapted protocols of Weigmann et al. 13 (link) and Geem et al. 14 Briefly, the ileum and colon were harvested and opened longitudinally, washed to remove fecal content, and shaken in HBSS containing 5 mM EDTA and 5% FBS for 20 min at 37 °C twice. The epithelial cell suspension was discarded and the remaining intestinal sections were cut into small pieces and incubated in HBSS containing 5% FBS, 0.5 mg mL -1 collagenase VIII (Sigma-Aldrich, St Louis, MO), and 40 μg mL -1 DNase I (Roche Diagnostics, Basel, Switzerland) for 20 min at 37 °C followed by vortexing. The digested tissues were washed twice with HBSS. The collected cells were then resuspended in staining buffer containing PBS, 2% FBS and 0.1% NaN 3 and stained for surface CD4-PE-Cy7 (clone: RM4-5, Tonbo Bioscience, San Diego, CA) and CD25-FITC (7D4, BD Bioscience, San Jose, CA). Intracellular staining of Foxp3-PE (FJK-16s, eBioscience) was performed using a Foxp3 Staining Buffer Set (eBioscience) according to the manufacturer's protocol. Separately, LP lymphocytes were stained for surface CD11c-PE (N418, Tonbo Bioscience) and CD103-PE-Cy7 (2E7, Biolegend) for CD103 + DCs analysis. Samples were analyzed by flow cytometry using BD FACSVerse and BD FACSSuite software (BD Bioscience).
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