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Dynabeads cd3 cd28 t cell expander

Manufactured by Thermo Fisher Scientific
Sourced in United States, Norway

Dynabeads CD3/CD28 T Cell Expander is a magnetic bead-based product designed for the activation, expansion, and isolation of human T cells. The beads are coated with antibodies against the CD3 and CD28 molecules, which are key receptors involved in T cell activation. This product can be used to stimulate and expand T cells in vitro for various research and clinical applications.

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12 protocols using dynabeads cd3 cd28 t cell expander

1

Th17 cell differentiation protocol

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CD4+ T cells were purified from thawed PBMCs (Supplementary Materials and Methods) using the EasySep negative selection kit (STEMCELL Technologies, Vancouver, British Columbia, Canada) according to the manufacturers’ instructions. Purity was over 95%. Bulk CD4+ T cells from patients with psoriasis and healthy controls were cultured with a Th17-skewing cocktail to simultaneously differentiate naive T cells into Th17 cells and expand existing memory Th17 cells. CD4+ T cells were cultured in duplicate at a density of 2 × 106 cells/ml in U-bottomed polystyrene tubes in RPMI 1640 medium (Thermo Fisher Scientific, Waltham, MA) containing 1% penicillin-streptomycin and 10% heat-inactivated human serum (10% HS-RPMI). They were activated with anti-CD3 and anti-CD28‒coated beads (1:1 bead-to-cell ratio, Dynabeads CD3/CD28 T cell Expander, Thermo Fisher Scientific) with or without recombinant human IL-23 (50 ng/ml), IL-1β (50 ng/ml), and TGF-β (0.5 ng/ml) (all from Miltenyi Biotec, Bergisch Gladbach, Germany) for 72 hours at 37 oC. FICZ (5 nm, ENZO, Farmingdale, NY) in DMSO or DMSO (0.005% v/v) as vehicle control were added for additional 24 hours. On day 4, cell supernatant was collected and stored at −80 oC for further analysis, and cell pellets were used to measure CYP1A1 enzymatic activity.
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2

IFNγ ELISpot Assay for TCR-T Cell Evaluation

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An IFNγ ELISpot assay was performed as previously described.13 Briefly, 1.0 × 105 AKF9‐specific TCR‐T cells or CTL clone cells were incubated with 1.0 × 105 target cells. AKF9‐specific TCR‐T cells or CTL clone cells were incubated with or without the anti‐PD‐1 antibody nivolumab at a final concentration of 20 nM for 3 h before analysis. In some experiments, AKF9‐specific TCR‐T cells were activated using a Dynabeads CD3/CD28 T‐cell Expander (Thermo Fisher Scientific) for 72 h or 10 μM chloroquine diphosphate (Sigma‐Aldrich) for 48 h to upregulate PD‐1 expression.19, 20
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3

Jurkat Cell Stimulation for Raman Analysis

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For Raman measurement, Jurkat cells were passaged at a density of 5 × 105 cells mL−1 in culture medium and stimulated by Dynabeads CD3/CD28 T Cell Expander (Thermo Fisher Scientific, Waltham, MA, USA) to obtain a bead-to-cell ratio of 1:1 for 24 h. To assess the uptake of free fatty acids, Jurkat cells were cultured in 24-well plates pre-coated with anti-CD3 (5 μg mL−1) and soluble anti-CD28 (1 μg mL−1) antibody (BioLegend, CA, USA) for 24 h. Cells were stimulated in an incubator at 37 °C under 5% CO2 in a humidified atmosphere.
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4

Th17 Cell Differentiation Protocol

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Naive CD4+ T cells were cultured in 96-well round-bottomed plates (Corning, New York City, NY, USA) at a density of 5 × 104 per well in X-VIVO 15 serum-free medium (Lonza, Walkersville, MD, USA) in the presence of Dynabeads CD3-CD28 T cell expander (one bead per cell; Life Technologies, Carlsbad, CA, USA) and indicated cytokines: IL-1β (10 ng/mL), IL-6 (20 ng/mL), TGF-β (1 ng/mL) and IL-23 (100 ng/mL) (Miltenyi) for Th17 differentiation, as previously described [11 (link),21 (link)]. After 5–6 days, cells were harvested and stained for flow cytometry analysis, or extensively washed, counted, and re-stimulated 1 × 106 cells/mL with Dynabeads CD3-CD28 T cell expander (one bead per cell) for 24 h for cytokine quantification.
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5

Isolation and Activation of Naive CD4+ T Cells

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PBMC were stained with the anti-CD4-FITC (Miltenyi; 1/100), and CD4+ T Lymphocytes were purified by immunomagnetic selection, using the anti-FITC isolation kit (Miltenyi, Bergisch Gladbach, Germany). After the isolation, the cells were stained with anti-CD4 FITC (Miltenyi; 1/100), anti-CD45RA BV421 (BD Biosciences, San Jose, CA, USA; 1/60), anti-CD45RO PE (BD Biosciences; 1/30), anti-CD27 APC (Miltenyi; 1/60), and CD4+ naive T-cells were sorted by a MoFlo high speed cell sorter (Beckman Coulter, Atlanta, GA, USA) as CD4high, CD45RAhigh, CD45RO, and CD27+. Sorted cells had a purity of over 97%, measured by flow cytometry (data not shown). Naive CD4+ T-cells were cultured in 96-well round-bottomed plates (Corning) at a density of 5 × 104 per well in X-VIVO 15 serum-free medium (Lonza, Walkersville, MD, USA) in the presence of a Dynabeads CD3-CD28 T-cell expander (one bead per cell; Life Technologies, Carlsbad, CA, USA). TGF-β (5 ng/mL), IL-4 (50 ng/mL) (Miltenyi), and OX40L (RnD, Minneapolis, MN, USA) were used to stimulate naïve CD4 T cells. After 6 days, supernatants were collected for IL-9 quantification.
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6

Quantification of Treg and MDSC Frequencies

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Treg and MDSC frequencies were determined by six-colour immunofluorescence staining of thawed PBMCs. The antibodies used are reported in Supplementary Table S3. Dead cells were identified using the LIVE-DEAD Fixable Violet Dead Cell Stain Kit (Life Technologies) and excluded from the analysis. For surface staining, cells were incubated with antibodies for 30 min at 4 °C after blocking non-specific antibody binding to the Fc receptors using FcR Blocking Reagent (Miltenyi). For Treg analysis, intracellular staining with APC-conjugated anti-Foxp3 (eBioscience) or the proper isotype control (rat IgG2a) was performed after fixation and permeabilisation of cells using an intracellular staining kit (eBioscience) according to the manufacturer's instructions. Intracellular staining was performed as follows. Lymphocytes activated overnight with anti-CD3/CD28 beads (DynaBeads CD3/CD28 T cell Expander, Invitrogen Dynal AS, Oslo, Norway) in the presence of 1 μl ml−1 GolgiPlug (BD Biosciences) were stained for the cell-surface marker CD3. The cells were then washed, fixed and permeabilised with Cytofix/Cytoperm buffer (BD Biosciences) and stained with a488-labelled anti-IFN-γ (BioLegend), PE-labelled anti-IL-2 (BD Biosciences). Data acquisition was performed using a Gallios (Beckman Coulter) flow cytometer, and the Kaluza software was used for data analysis.
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7

T Cell-RPE Cell Co-culture Protocol

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T cells were purified from fresh whole blood from healthy, young volunteers by isopycnic centrifugation (Lymphoprep, Axis-Shield) and T cell negative selection (Dynal T cell negative selection kit, Invitrogen), as previously described [31 (link)]. Verbal consent to blood sampling was considered adequate by the local Ethics Committee, and was obtained. Biological specimens and all data obtained from their use for research were anonymized. Recruitment, verbal consent, and storage/use of blood specimens were carried out in accordance with the Declaration of Helsinki. T cells were added in the ratio 2.5 T cells: 1 RPE cell to the bottom or apical compartment as previously described with Dynabeads CD3/CD28 T Cell Expander (Invitrogen) [31 (link)]. This ratio was chosen to achieve cytokine concentrations in the supernatant comparable to concentrations in vivo in areas with high local T cell density. At the end of co-culture, media was gathered, and RPE cells were removed using a cell scraper. RNA was prepared as previously described [31 (link)]. A different donor was used for each independent replicate. Cell culture supernatants were diluted 1:5 or 1:10 in PBS-T with 5 mM EDTA for PTX3 protein quantification.
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8

Establishment of Latent HIV Infection Model

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Cultured memory CD4+ T cells harboring latent HIV infections were cultured as previously described [37 (link)]. Briefly, naïve CD4+ T cells were isolated from peripheral blood mononuclear cells using an isolation kit (Miltenyi, Order no:130-091-894) according to manufacturer’s instructions with a manual MACS LC column. To activate naïve cells, 106 cells were cultured in complete media supplemented with 2µg/ml anti-IL-12 (Peprotech 500-P154G), 1 µg/ml anti-IL-4 (Peprotech 500-P24) and 10 ng/ml TGF-β in the presence of 25 µl Dynabeads CD3/CD28 T cell Expander (Invitrogen, 111.31D) for 3 days. Cells were then switched to complete media supplemented with 30 IU/ml IL-2 for two more days. On day 5, cells were infected with DHIV virus corresponding to 100 ng p24 (measured by ELISA) per 106 cells/ml. Cells were centrifuged at 2900 RPM for 2 hours at 37C, at which point media was removed and replaced with complete media plus IL-2. Cells are cultured to a quiescent state for 9 days before reactivation experiments.
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9

Modulating T Cell Activation with SPMs

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Highly purified naïve CD4+ T cells were cultured in round bottom 96-well plates (Falcon) at a density of 5×104 cells at 37°C in 200µl final volumes of X-VIVO 15 medium in presence of Dynabeads CD3/CD28 T Cell Expander (one bead per cell; Invitrogen), TGF-β (2 ng/ml; Miltenyi Biotec) and IL-2 (20 U/ml), in the presence or absence of RvD1, RvD2, or MaR1 (10 nmol/L). Cultures were supplemented with SPMs every other day for 5 d.
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10

Phenotypic Analysis of T Cell Activation by LEVs

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A total of 2.5 × 105 PBMCs were seeded for 96 h in a U‐bottomed 96‐well plate with or without 10 and 25 μg/ml LEVs. Positive control was performed using Dynabeads CD3/CD28 T‐cell Expander (Invitrogen Life Technologies). The phenotype of CD4, CD8 and T cells was determined using Alexa Fluor405‐conjugated anti‐CD45RA, PE/Texas Red‐conjugated anti‐CD27, PerCP‐Cy5‐5‐conjugated anti‐CD4, APC‐Cy7‐conjugated anti‐CD8, PE‐conjugated anti‐TCR and FITC‐conjugated anti‐CD3 MAbs (all purchased by Miltenyi Biotec). After 20 min of staining at room temperature in the dark, cells were washed with FACS buffer (PBS supplemented with 2% FBS and 2 mM EDTA) and analysed by flow cytometry on a FACS Aria Flow Cytometer using FACS Diva software.
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