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2 protocols using granzyme b alexa fluor 647

1

Comprehensive Immunophenotyping of Dendritic Cells and T Cells

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For in vitro flow cytometry analysis, cells were harvested and incubated with Fixable Viability dye APC-eFluor 780 (1:1000 dilution, Ebioscience, San Diego, CA) for 20 min. For DC cultures, cells were then stained using directly conjugated antibodies against murine surface antigens, as follows: anti-CD40-PE, anti-CD80-FITC, anti-CD3-PE-Cy7, anti-CD11b-PE, anti-CD11c-APC, anti-CD86-Alexa Fluor 700, anti-CD8-BV605, and anti-MHCII-Percp-Cy5.5 (1:400 dilution, Biolegend, San Diego, CA) and analyzed with a BD LSR-Fortessa Flow Cytometer (Becton–Dickinson, Franklin Lakes, NJ). For OTI T cell analysis, flow cytometry panel was performed as described: anti-CD4-PE, anti-CD8-APC, anti-CD44-PErcp-Cy5.5, and anti-CD3 PE/CY7 (1:200, Biolegend). For ex vivo flow cytometry analysis, the directly conjugated antibodies against murine surface antigens are as follows: anti-CD3-Alexa Fluor 700 (1:50), anti-CD4-PE-Cy7 (1:100), anti-CD8-BV605 (1:100), anti-CD44-PE (1:200), and anti-CD62L-APC-Cy7 (1:100) for surface staining (Biolegend). For intracellular staining, cells were fixed/permeabilized stained using the Foxp3 staining kit (Ebioscience) using Foxp3-eFluor 450 (1:100, Ebioscience), granzyme B Alexa Fluor 647 (1:50, Biolegend) as described in the product specification sheet.
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2

Intracellular Cytokine Staining of Tumor Cells

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For intracellular cytokine staining, tumor samples or peripheral blood cells were collected 4 h after the last dose. Tumor samples were homogenized using a gentleMACS dissociator and then filtered through 70 µm cell strainers to prepare a single-cell suspension. Blood cells were lysed with a red blood cell lysis solution. Cells were stimulated with PMA + Ionomycin in the presence of brefeldin A (BD Biosciences; #555029) and monensin (#554724) for 4–6 h. The cells were stained with CD45-BV750 (BioLegend; #103157, clone 30-F11), CD3-APC-Cy7 (BioLegend; #100222, clone 17A2), CD4-Alexa Fluor 700 (BioLegend; #100430, clone GK1.5), and CD8a-Pacific Orange (Thermo Fisher Scientific; #MCD0830, clone 5H10) in the presence of purified rat anti-mouse CD16/CD32 and then fixed and permeabilized using the Foxp3/Transcription Factor staining buffer set. The cells were then stained with IFN-γ-PE (BD Biosciences; #554412, clone XMG1.2) or GranzymeB-Alexa Fluor 647 (BioLegend; #515406, clone GB11). Samples were analyzed using CYTEK Aurora spectral flow cytometry (CYTEK Biosciences, Fermont, CA, USA), and all data were analyzed using FlowJo software.
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