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7 protocols using gbm cell lines

1

GBM and 293T Cell Culture

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GBM cell lines obtained from the American Type Culture Collection (ATCC, Manassas, VA, USA) were maintained in conditioned media. We maintained 293T cells in DMEM supplemented with 10% fetal bovine serum (FBS). Cells were incubated at 37 °C with 5% CO2. All cells were routinely authenticated on the basis of short tandem repeat (STR) analysis, morphologic and growth characteristics and mycoplasma detection.
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2

Establishment of GBM Cell Lines and Ex Vivo Cultures

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GBM cell lines were obtained from the American Type Culture Collection and from Professor M. E. Hegi (CHUV, Lausanne, Switzerland). PIK3CA mutated GBM cell lines SK-MG-17 (V344G) and SK-MG-26 (H1074Y) were kindly provided by Professor G. Ritter (Ludwig Institute for Cancer Research, New York Branch at MSKCC, New York, NY, USA) and have been previously described [21] (link). GBM ex vivo cultures were established at the Department of Neurosurgery of the University Hospital Zurich (Zurich, Switzerland) as previously described [28] (link). All procedures conducted during the establishment of the ex vivo cultures were in accordance with the Declaration of Helsinki and approved by the ethics committee of the Canton Zurich. Informed written consent was obtained from all patients. All GBM cell lines and ex vivo cultures were cultured in Dulbecco’s modified Eagle’s medium (Sigma-Aldrich, Buchs, Switzerland) supplemented with 10% (v/v) heat-inactivated fetal calf serum, L-glutamine (Sigma-Aldrich, Buchs, Switzerland), penicillin/streptomycin (GIBCO, Life Technologies Europe, Zug, Switzerland), and 10 μg/ml gentamycin (Sigma-Aldrich, Buchs, Switzerland).
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3

Establishing GBM Cell Cultures

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Immortalized GBM cell lines were purchased from American Type Culture Collection (ATCC, Manassas, VA, USA) and kept in their respective media (Sigma-Aldrich, St. Louis, MO, USA). Primo-cell cultures were established and RNA extracted from isocitrate dehydrogenase (IDH) wild-type GBM surgical specimens in our laboratories (Medical University Vienna, Kepler University Hospital Linz) as described [17 (link), 18 (link)]. NCH644 and NCH421K glioma stem cell-like (GSC) models were derived from CLS Cell Lines Service GmbH (Eppelheim, Germany: MTA to FE). Cell culture conditions are outlined in the supplementary materials.
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4

Cultivation of Human Glioblastoma Cell Lines

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All cells used in the present study were human glioblastoma multiforme (GBM) cell lines, purchased from the American Type Culture Collection (ATCC, Manassas, VA, USA). These cell lines were Ln18 (ATCC®, CRL-2610™), U87 (ATCC®, HTB-14™), T98G (ATCC®, CRL-1690™), and M059K (ATCC®, CRL-2365™). All cells were grown in RPMI 1640 without phenol red, supplemented with 10% fetal bovine serum (FBS), 2 mM L-glutamine, and penicillin (100 IU mL−1) /streptomycin (100 μg mL−1) at 37 °C in a 5% CO2 and 95% humidified atmosphere.
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5

Establishment of GBM Cell Lines

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Commercially available GBM cell lines were obtained from American Type Culture Collection. Established MZ-derived GBM cell lines were obtained from Professor Donat Kögel (University Hospital, Frankfurt, Germany) (Hetschko et al, 2008 (link)). The cells were grown in complete growth medium as previously described (Murphy et al, 2013 (link)). Isolation of patient tumours for the generation of low-passage primary patients GBMs was approved by the human ethics committee of the Queensland Institute of Medical Research and Royal Brisbane and Women's Hospital (Day et al, 2013 (link)). The cells were grown in serum-free culture medium on 1% matrigel-coated flasks, as previously described (Pollard et al, 2009 (link)). All cells were maintained in an incubator at 37 °C in humidified air with 5% CO2.
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6

Culturing Glioblastoma and HeLa Cell Lines

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GBM cell lines were purchased from American Type Culture Collection (ATCC, USA) and grown in a humidified, 5 % CO2 incubator at 37 °C in the complete media as described by the provider. DBTRG-05MG (ATCC, USA, #CRL-2020) cells were grown in ATCC-formulated RMPI-1640 medium (Gibco, Life Technologies, USA, #A10491-01) supplemented with 10 % foetal bovine calf serum (Gibco, Life Technologies, USA, #16000044), non-essential amino acids (Gibco, Life Technologies, USA, #11140050) and 100 U/mL penicillin, 0.1 mg/mL streptomycin (Gibco, Life Technologies, USA, #15140122) to generate complete media. M059J (ATCC, USA, #CRL-2366) cells were grown in media containing a 1:1 mixture of Dulbecco’s Modified Eagle’s Medium and Ham’s F12 Medium (DMEM-F12, ATCC, USA, #30-2006) supplemented with 10 % foetal bovine calf serum, non-essential amino acids and 100 U/mL penicillin, 0.1 mg/mL streptomycin. LN18 (ATCC, USA, #CRL-2610) and LN229 (ATCC, USA, #CRL-2611) were grown in Dulbecco’s Modified Eagle’s Medium (DMEM, ATCC, USA, #30-2002) supplemented with 5 % foetal bovine calf serum and 100 U/mL penicillin, 0.1 mg/mL streptomycin. HeLa cells were grown in a humidified, 5 % CO2 incubator at 37 °C in the complete media, Dulbecco’s Modified Eagle’s Medium (DMEM, ATCC, USA, #30-2002) supplemented with 10 % foetal bovine calf serum and 100 U/mL penicillin, 0.1 mg/mL streptomycin.
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7

Glioblastoma Cell Line Culture Protocol

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All GBM cell lines and normal SVGP12 cells were originally purchased from ATCC (American Type Culture Collection, Rockville, MD, USA). Cells were cultured in DMEM/DME/F-12 1:1 (Dulbecco's modified Eagle's medium/Ham's nutrient mixture F-12) (Invitrogen) supplemented with 10% fetal bovine serum (FBS) and 1% penicillin and streptomycin (P/S). All cell lines were incubated in a humidified atmosphere at 37 °C and 5% CO2. The growth media, reagents, and supplements were obtained from Gibco. HA (H3663) and Flag (SAB4200071) antibodies, MG-132 (M7449), and CHX (C7698) were acquired from Sigma (Shanghai, China); PHF19 (77271 S), β-catenin (ab32572), MMP7 (ab38996) antibodies and the Cell Cycle Antibody Sampler Kit (no. 9932), the Cyclin Antibody Sampler Kit (no. 9869), and the Epithelial–Mesenchymal Transition Antibody Sampler Kit (no. 9782) were purchased from Cell Signaling Technology (Shanghai, China). SIAH1 (ab2237), C-myc (ab32), and Axin2 (ab109307) antibodies were obtained from Abcam (Shanghai, China). All antibodies were diluted according to the instructions.
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