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Sampliq c18

Manufactured by Agilent Technologies

The SampliQ C18 is a solid-phase extraction (SPE) product from Agilent Technologies. It is designed for sample preparation and purification. The SampliQ C18 utilizes a silica-based sorbent with octadecyl (C18) functional groups to retain and extract analytes from complex matrices.

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2 protocols using sampliq c18

1

Tyrosine Extraction from I. umbellifera

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Due to the high quantity of tyrosine in I. umbellifera, and tyrosine's low solubility, a special extraction protocol was developed. Twenty‐five milligrams of dried leaf sample were homogenized as above and extracted in 2 mL of acidified 10% MeOH (90% water adjusted to pH = 3 with acetic acid/10% MeOH; v/v) for 20 min at 80°C. Samples were centrifuged at 13,250 × g and ambient temperature for 5 min. The resulting supernatant was retained, and the extraction was repeated. The combined supernatants were separated on preweighed Agilent SampliQ C18 solid‐phase extraction columns (500 mg ODS). The supernatant was added to the prepared column and washed with an additional 2 mL 10% MeOH (pH 3). The 10% MeOH wash contained tyrosine and was dried under vacuum (0.8 torr) and redissolved in 20 mL of 10% MeOH. Samples were then separated on a Hitachi LaChrom Elite with an Omnisphere C18 250 × 2.0 mm column isocratically using 10% MeOH/90% HOH with 0.1% formic acid. Tyrosine was detected at 275 nm and quantified based on peak area and external calibration curves. The SampliQ columns were dried and reweighed. As I. umbellifera does not contain saponins (Coley et al. 2005), the difference in final minus initial weights was considered to be the mass of the phenolic fraction trapped on the column.
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2

Proteomic Analysis of Co-Immunoprecipitation Samples

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Protein analysis of co-immunoprecipitation samples shown in Figure 1 were performed by mass spectrometry as described previously65 (link). Briefly, samples were digested with 1 μg trypsin in 50 mM ammonium bicarbonate (pH 7.8). Peptides were desalted using a SampliQ C18 (Agilent) cartridge and eluants were dried using a CentriVap Concentrator (Labconco) before resuspending the sample in water. Protein digests were analyzed by LC/MS on a Q Exactive Plus mass spectrometer (ThermoFisher Scientific) interfaced with a nanoAcquity UPLC system (Waters Corporation) equipped with a BEH dC18 column (Waters Corporation) and a C18 trapping column. Peptides were eluted using a linear gradient from 99% solvent A (0.1% formic acid in water (v/v)) and 1% solvent B (0.1% formic acid in acetonitrile (v/v)) to 40% solvent B over 60 minutes. The mass spectrometer was run in the positive ion mode and acquired in triplicate. Peak lists were generated from the LC/MS data using Mascot Distiller (Matrix Science) and searched using the Spectrum Mill software package (Agilent) against a species limited (human) Swissprot protein database. The spectral count for human Las1L and Nol9 are reported in Figure S1 along with representative spectra.
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