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376 protocols using winnonlin

1

Warfarin Dosing Simulation for CYP2C9 Genotypes

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The corresponding simulations of INR levels over first 10 days of treatment with warfarin were performed for each participant using a Jusko-type Indirect Response Model (IRM) for an inhibitory effect, based on their individual CYP2C9 genotype data and population average parameters. Analyses were conducted through WinNonlin® (WinNonlin® professional software, version 2.1, Pharsight Inc., 1997, NC, USA). Pharmacokinetic (PK) of warfarin was described by a one-compartment model, with first-order absorption and linear elimination rate while the pharmacodynamic (PD) response was simulated by an indirect model that accounts for delay in anticoagulation response. A schematic representation of the indirect pharmacokinetic-pharmacodynamic (PK-PD) model to be employed in the simulation is depicted in Figure 5.
Initial warfarin doses (mg/day) used in the simulation procedures was determined by a previously developed pharmacogenetic-driven algorithm in Puerto Ricans. The average IC50 value for warfarin inhibition of Vitamin K recycling was set at 1.5 mg/L for all cases, which are the plasma warfarin concentration required to reach a 50% reduction in synthesis/activation of prothrombin-related, calcium-dependent clotting factors (i.e., factors II, VII, IX, X, protein Z and C) and a corresponding doubling of the INR level.
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2

Warfarin Dosing Simulation for CYP2C9 Genotypes

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The corresponding simulations of INR levels over first 10 days of treatment with warfarin were performed for each participant using a Jusko-type Indirect Response Model (IRM) for an inhibitory effect, based on their individual CYP2C9 genotype data and population average parameters. Analyses were conducted through WinNonlin® (WinNonlin® professional software, version 2.1, Pharsight Inc., 1997, NC, USA). Pharmacokinetic (PK) of warfarin was described by a one-compartment model, with first-order absorption and linear elimination rate while the pharmacodynamic (PD) response was simulated by an indirect model that accounts for delay in anticoagulation response. A schematic representation of the indirect pharmacokinetic-pharmacodynamic (PK-PD) model to be employed in the simulation is depicted in Figure 5.
Initial warfarin doses (mg/day) used in the simulation procedures was determined by a previously developed pharmacogenetic-driven algorithm in Puerto Ricans. The average IC50 value for warfarin inhibition of Vitamin K recycling was set at 1.5 mg/L for all cases, which are the plasma warfarin concentration required to reach a 50% reduction in synthesis/activation of prothrombin-related, calcium-dependent clotting factors (i.e., factors II, VII, IX, X, protein Z and C) and a corresponding doubling of the INR level.
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3

Marbofloxacin Pharmacokinetics and Pharmacodynamics

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The data obtained with a single subcutaneous injection of 1.25, 2.5, 5 and 10 mg/kg marbofloxacin were analyzed separately using WinNonlin version 5.2 (Pharsight Corporation). Marbofloxacin concentration-time data were best described using the noncompartment model with extravascular input. According to dose proportionality from the obtained PK parameters, we used them to estimate the AUC0-24h, Cmax for each tested mabofloxacin dosing for which no kinetics were determined. The PK/PD analysis was performed by using the inhibitory effect Emax model. This model is described by the following equation: E = Emax-(Emax-E0)*(C/(EC50 + C)), where E is the change in log10CFU/lung after 24 h in treated mice compared to the initial log10CFU/lung in untreated control mice; Emax is the log change in CFU per lung, comparing 0 and 24 h in the untreated control mice; E0 is the change in log10CFU/lung between the treated mice with untreated mice after the 24 h period of the study, when the detection limit is reached; C is the PK/PD parameter (e.g. fAUC/MIC, fCmax/MIC, fT>MIC); EC50 is the C value at which 50 % of the maximal antibacterial effect is produced. These PD parameters were calculated using the nonlinear regression program (WinNonlin, Pharsight Corporation).
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4

Bronchodilator Efficacy of Five Treatments

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The planned sample size of 80 evaluable patients per group provided !90% power to detect a difference of 0.12 L from placebo at the 5% level of significance (two-sided) [18] (link), assuming a standard deviation for trough FEV 1 of 0.229 L. The full analysis set was defined as all patients who were randomised, had received at least one dose of study treatment and had a valid baseline measurement for at least one end point. The primary and secondary end points were analysed using analysis of covariance, which compared the bronchodilator efficacy of the five treatments, as determined by trough FEV 1 response (L) after 4 weeks of randomised therapy. In this analysis, 'baseline trough FEV 1 ' was a linear covariate, 'treatment' was a fixed effect and 'centre' was a random effect.
Pharmacokinetic analysis of the plasma/urine concentration-time data was carried out by noncompartmental analysis using the WinNonlinä software program (Professional, Version 5.2, Pharsight Corporation, Mountain View, California, USA). All randomised patients who received at least one dose of study medication were included in the safety evaluation, which was analysed using descriptive statistical methods.
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5

Safety Analysis of Novel Drug

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All safety analyses were performed on the treated set, which included all patients who received at least one dose of the study drug. Analyses of AEs, laboratory data, vital signs and pharmacokinetic parameters were descriptive in nature. Pharmacokinetic parameters were determined by non-compartmental analysis of the plasma/urine concentration-time data using the WinNonlinä software (Professional, Version 5.2, Pharsight Corporation, Mountain View, California, USA).
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6

Plasma Pharmacokinetics of FAM-siRNA in Rats

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Plasma pharmacokinetic analysis was performed in healthy male Wistar rats. Plasma concentrations were determined by measuring the fluorescence intensity of FAM-labeled siRNA (FAM-siRNA) in serum. Briefly, Rats were randomly divided into 2 groups of 5 mice per group and respectively injected with free FAM-siRNA and P/LNPs-siRNA-MF (FAM-siRNA-loaded in P/LNPs-MF) at a dose of 10 mg/kg. Then, 200 μL of blood samples from the ophthalmic vein were collected at 5 min, 15 min, 30 min, 1 h, 2 h, 4 h, 10 h, 24 h and 48 h after injection. Blood samples were stored at 4°C for 5min and then centrifuged at 10, 000rpm for 10min. Plasma supernatant was mixed with 1% SDS and heated to 95°C, followed by centrifugation at 10, 000rpm for 10 min. Fluorescence of supernatant was measured on a microplate reader (λex: 485 nm, λem: 520 nm). Pharmacokinetics parameters including maximum plasma concentration (Cmax), half-life (t1/2), area under the curve (AUC0-∞), mean residence time (MRT0-∞) and total body clearance (CL) were calculated by non-compartmental analysis using WinNonlin version 5.2.1 software (Pharsight Corp.).
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7

Noncompartmental PK Analysis of Canocapavir

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The following observed data were used for the analysis of the plasma PK parameters with the noncompartmental PK approach using WinNonlin, version 8.2, software (Pharsight Co., Mountain View, CA, USA): the maximum observed plasma concentration (Cmax), the time to maximum observed serum concentration (Tmax), area under the concentration–time curve from the time of dosing to the last time point with the measurable plasma concentration (AUC0-t) prior to the next dose, AUC from the time of dosing extrapolated to infinity (AUC0-∞), the terminal elimination half-life of the drug in plasma (t1/2), clearance (CL/F), volume (Vz/F), accumulation rate (RAC), and degree of fluctuation. All of these parameters in the treatment cohorts were analyzed using the descriptive statistics methods provided by SAS 9.1 software (Cary, NC, USA). The dose proportionality of Canocapavir was evaluated by the power model and the linear fixed-effect model. Descriptive analysis was used for safety, tolerability and antiviral activity indexes. Please see Additional file 1 for the detailed methodology.
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8

Pharmacokinetic Analysis of Novel Compound

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Pharmacokinetics were estimated by standard non-compartmental analysis methods using WinNonlin (Professional Version 3.0; Pharsight Corp; Mountain View, CA). The apparent terminal elimination rate constants (λz) were determined by linear least-squares regression through the linear terminal portion of the graph of the log plasma concentration versus time. The apparent elimination half-life (t1/2) was calculated as 0.693/λz. Area under the plasma concentration–time curve (AUC0–T) was determined using the linear trapezoidal rule from time zero to the time of the last detectable sample (T). Area under the plasma concentration–time curves through infinite time (AUC0–∞) was calculated by adding CTz to AUC0–T. The CLp was calculated as dose/AUC0–∞. Bioavailability was calculated as follows: (AUCpo/AUCiv)·(Doseiv/Dosepo)·100 %.
Differences in concentration levels between groups were assessed using Kruskal–Wallis test. A p value <0.05 was considered significant.
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9

Pharmacokinetics of LMT-28 in Mice

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The plasma concentrations versus time profiles of LMT-28 in mice were analyzed by a non-compartmental model using WinNonlin software ver 5.3 (Pharsight, Mountain View, CA, USA). The pharmacokinetic parameters such as area under the plasma concentration-time curve (AUC), peak plasma concentration (Cmax) and the time to reach a peak concentration (Tmax), terminal elimination half-life (t1/2), mean residence time (MRT) after oral administration were obtained from each mouse’s plasma concentration-time plots for LMT-28. All data were expressed as the mean±standard deviation. A value of p<0.05 by student t-test or analysis of variance analysis was considered to be statistically significant.
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10

Pharmacokinetic Analysis of Novel Compound

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The data are presented as mean ± SD and were analyzed by one-way ANOVA followed by Tukey post-hoc analysis using GraphPad Prism 5.0 software (GraphPad Software, San Diego, CA). p value≤0.05 was considered as statistically significant. For pharmacokinetic analysis, standard non-compartmental analysis (WinNonlin®, Pharsight Corp., Cary, NC) was performed to calculate the area under the plasma concentration-time curve from zero to infinity (AUC0→inf), maximum plasma concentration (Cmax), and elimination half-life (t1/2).
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