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29 protocols using ab101562

1

Protein Expression Quantification

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The performance of western blot was conducted as some time ago published [25 (link)]. The antibodies were listed as follows: anti-AGK (ab137616; 1:500; Abcam, Cambridge, MA, USA), anti- Hexokinase 2 (HK2) (ab273721; 1:1,000; Abcam), anti-Lactate dehydrogenase A (LDHA) (ab101562; 1:500; Abcam).
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2

Immunoblotting Analysis of Protein Expression

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Whole protein was extracted using radioimmunoprecipitation assay lysis buffer (Beyotime) and quantified using the bicinchoninic acid Protein Assay Kit (Beyotime). Briefly, a 20 μg protein aliquot was loaded into 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis for separation, followed by electroblotting on a polyvinylidene fluoride membrane (Merck Millipore, Burlington, MA, USA), blocking using 5% fat-free milk, and overnight incubation with the following primary antibodies: anti-UBR5 (ab70311; Abcam), anti-AXIN1 (ab55906; Abcam), anti-β-catenin (ab32572; Abcam), anti-Survivin (ab76424; Abcam), anti-C-myc (ab39688; Abcam), anti-lactate dehydrogenase A (LDHA, ab101562; Abcam), anti-pyruvate kinase isozymes M2 (PKM2, ab137852; Abcam), anti-H3 (ab1791; Abcam), and anti-GAPDH antibody (60004-1-1G; ProteinTech, Rosemont, IL, USA). They were washed thrice with Tris-buffered saline with Tween 20 and incubated with horseradish peroxidase-conjugated secondary antibodies (A0208, A0216; Beyotime). Finally, the blot was imaged using the Enhanced Chemiluminescence Detection Kit (Pierce Biotechnology), and the band intensity was measured using Image-Pro Plus 6.0 software, with GAPDH as the loading control.
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3

Evaluating Protein Expression in Breast Cancer

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Total proteins were isolated from breast cancer tissues and cells using RIPA lysis buffer (Sigma-Aldrich; Merck KGaA). The protein concentration was measured with BCA Protein Assay kit (CoWin Biosciences), and the protein (60 µg) was separated on a 10% SDS-PAGE gel. After transferring separated proteins onto polyvinylidene difluoride membrane (EMD Millipore), membranes were blocked with 5% non-fat milk for 2 h at 4°C and then incubated with the following primary antibodies: Rabbit anti-GAPDH (1:1,000; ab8245; Abcam), anti-NUAK2 (1:1,000; ab224079; Abcam), anti-glucose transporter 1 (GLUT1; 1:1,000; ab115730; Abcam), anti-pyruvate kinase muscle isozyme M2 (PKM2; 1:1,000; ab137852; Abcam) and anti-lactate dehydrogenase A (LDHA; 1:1,000; ab101562; Abcam). Following overnight incubation at 4°C, membranes were washed three times and incubated with peroxidase-labeled secondary antibody (anti-rabbit IgG, 1:2,000; ab6721; Abcam) at room temperature for 2 h. Protein bands were visualized using enhanced chemiluminescence system (ECL; Thermo Fisher Scientific, Inc.). Image Lab Software (version 1.8.0; Bio-Rad Laboratories, Inc.) was used for quantification.
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4

Protein Expression Analysis of Pancreatic Cancer Cells

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Cell lysates were prepared by lysing pancreatic cancer cells in RIPA lysis and extraction buffer (Thermo Fisher Scientific Inc., Waltham, MA USA) supplemented with a proteinase inhibitor cocktail (Thermo Fisher Scientific Inc.) and phosphatase inhibitor (Cell Signaling Technology, CST, Danvers, MA, USA). Equal amounts of denatured protein were subjected to sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS‐PAGE; Bio‐Rad, Hercules, CA) followed by electro‐transferred onto polyvinylidene fluoride (PVDF) membrane (Millipore, Burlington, MA, USA). Membranes were incubated with blocking buffer containing 5% bovine serum albumin (BSA; Sigma‐Aldrich) for 2 hours before overnight incubation with the relevant antibodies: LDHA (1: 1000, ab101562, Abcam), AMPKα (D5A2) (1:1000, CST), Phospho‐AMPKα (Thr172) (40H9) (1:1000, CST), mTOR (7C10) (1:1000, CST), Phospho‐mTOR (Ser2448) (D9C2) (1:1000, CST), β‐Actin (D6A8) (1: 1000, CST). The detailed reactivity of each antibody used are included in the supplementary materials (Table S1). HRP‐conjugated secondary antibody (1: 5000, CST) was applied to the membrane for 2 hours at room temperature, and were then visualized using the Amersham™ ECL Select™ western blotting detection reagent (GE Healthcare, Little Chalfont, Buckinghamshire, UK) using a chemiluminescence imaging system (Bio‐Rad, Hercules, CA, USA).
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5

Western Blot Analysis of DLAT and SP1

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Total proteins were extracted from cells or tissues using RIPA lysis buffer (Promega, Madison, WI, USA). Proteins were separated on an 8% SDS-PAGE gel and then transferred to PVDF membranes. The membrane was blocked with 5% skim milk at room temperature for 1 h and then incubated with primary antibodies (anti-DLAT, 1:1000 dilution, Abcam, ab51608; anti-SP1, ab101562, 1:1000 dilution, Abcam) at 4 °C overnight, followed by incubating with horseradish peroxidase (HRP) conjugated β-actin secondary antibodies (1:5000) at room temperature for 90 min. The protein bands were scanned and visualized by the GS700 imaging densitometer (Bio-Rad Laboratories) and analyzed by Image Studio software.
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6

Western blotting analysis of HIF1A and LDHA

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NSCLC tissue or cellular proteins were respectively extracted with cell lysis buffer (Promega, Madison, WI, USA). Thirty micrograms of proteinextraction was separated on an 8% SDS-PAGE gel and then transferred to nitrocellulose membranes. After blockage by milk, the membranes were incubated for 2 h at room temperature with primary antibody (anti-HIF1A, 1:1000 dilution, Abcam, ab51608; anti-LDHA, ab101562, 1:1000 dilution, Abcam). Then, blots were incubated at room temperature for 90 min with horseradish peroxidase (HRP) conjugated beta-actin secondary antibodies (diluted 1:5000). The bands were scanned and visualized by GS700 imaging densitometer (Bio-Rad Laboratories) and analyzed by Image Studio software.
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7

Protein Expression Analysis in ZEA-Treated Cells

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After the cells were exposed to various concentrations of ZEA, the cells were collected using trypsinization. All proteins of the cells were extracted with RIPA lysis buffer. The concentration of the entire protein was detected and adjusted using a BCA protein assay kit. After the whole protein was mixed with the loading buffer and boiled for 10 min, the protein extracted was injected into a sodium dodecyl sulfate polyacrylamide gel, separated according to the size of the protein, and then the protein was transferred to a polyvinylidene fluoride film. The membrane was incubated with 5% skim milk solution; the membrane was then probed with the indicated pro-antibody at a temperature of 4 °C overnight, washed and then incubated with secondary antibody for 2 h at room temperature. Protein signals were detected using an ECL detection system. The polyclonal antibodies against GLUT1 (1:100000, ab115730), LDH (1:1000, ab101562), and MCT4 (1:1000, ab180699) were acquired from Abcam (Cambridge, MA, USA). The polyclonal antibodies against GAPDH (1:1000, 2118) and SIRT1 (1:1000, D1D7) were acquired from Cell Signaling Technology (Boston, MA, USA);
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8

Protein Extraction and Western Blot Analysis

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The radioimmunoprecipitation assay (RIPA) buffer was used to extract total protein, supplemented with 1% protease inhibitors (P8340, Sigma-Aldrich) and phosphatase inhibitors (P5726, Sigma-Aldrich). The bicinchoninic acid (BCA) assay was used to measure protein concentration. Western blot analysis was performed, as previously described (12 (link)). THBS2 (sc-136238, Santa Cruz Biotechnology), TLR4 (ab30667, Abcam), Ki67 (Proteintech Group, Inc.), HIF-1α (ab2185, Abcam), GLUT1 (ab115730, Abcam), HK2 (ab104836, Abcam), ALDOA (ab150396, Abcam), PKM2 (ab137852, Abcam), and LDHA (ab101562, Abcam) primary antibodies were used. Horseradish peroxidase (HRP)-conjugated AffiniPure goat anti-rabbit IgG (H+L) and HRP-conjugated AffiniPure goat anti-mouse IgG (H+L) were obtained from Proteintech Group, Inc. (Jackson).
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9

Western Blot Analysis of NSCLC Cells

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After transfection for 48 h, NSCLC cells were harvested. The cell lysates were obtained using the Radioimmunoprecipitation assay (RIPA) lysis buffer (Beyotime, Shanghai, China). Cell lysates (30 μg) were subjected to 12% separating gel and then blotted to the polyvinylidene fluoride (PVDF) membrane (Bio-Rad). After blocking, the PVDF membrane was mixed with the primary antibodies, including anti-hexokinase 2 (anti-HK2, ab209847, Abcam, Cambridge, MA, United States), anti-lactate dehydrogenase A (anti-LDHA, ab101562, Abcam), anti-KRAS (ab180772, Abcam), anti-CD9 (ab92726, Abcam), anti-CD81 (ab79559, Abcam), anti-tumor susceptibility 101 (anti-TSG101, ab125011, Abcam), anti-Golgi matrix protein 130 kDa (anti-GM130, ab32337, Abcam), and anti-β-actin (anti-20272, Abcam). After washing three times using PBS-Tween 20 (PBST), horseradish peroxidase(HRP)-combined secondary antibody (ab205718, Abcam) was utilized to incubate with the membrane for 2 h at room temperature. After washing with PBST, protein signals were visualized using the enhanced chemiluminescent (ECL) system (Beyotime).
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10

Protein Expression Profiling in Melanoma

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Protein was extracted from WM451 and SK-MEL-1 cells using radioimmunoprecipitation assay lysis buffer (Thermo Fisher Scientific, Inc.). Protein assay reagents (Thermo Fisher Scientific, Inc.). were used to measure the protein concentration. Total protein (50 µg/well) was then separated with 12% SDS-PAGE and transferred to a polyvinylidene fluoride membrane. Following this, the membrane was blocked with 5% nonfat dried milk in PBS at room temperature for 2 h. Subsequently, the membrane was incubated with rabbit anti-HIF-1α antibody (1:50; ab51608; Abcam, Cambridge, MA, USA), rabbit anti-HK2 antibody (1:50; ab37593; Abcam), rabbit-anti-LDH-A antibody (1:100; ab101562; Abcam), or rabbit anti-GAPDH antibody (1:50; ab9485; Abcam) overnight at 4°C. After washing with PBS for 10 min, the membrane was then incubated with goat anti-rabbit secondary immunoglobulin G (1:10,000; ab7090; Abcam) at room temperature for 1 h. After washing with PBS for 10 min, enhanced chemiluminescence reagent (Thermo Fisher Scientific, Inc.) was used to detect the signal on the membrane. Data were analyzed by densitometry using Image Pro Plus v.6.0 software (Media Cybernetics, Inc., Rockville, MD, USA) and normalized to GAPDH expression.
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