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Tunel reagent

Manufactured by Beyotime
Sourced in China

The TUNEL reagent is a tool used in molecular biology and cell biology research. It is designed to detect and label DNA fragmentation, a hallmark of apoptosis or programmed cell death. The reagent contains the necessary components to perform the TUNEL (Terminal deoxynucleotidyl transferase dUTP Nick End Labeling) assay, which is a widely used technique for the in situ detection of apoptotic cells.

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25 protocols using tunel reagent

1

TUNEL Assay for PRP-Induced BMSC Apoptosis

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The terminal deoxynucleotidyl transferase (TdT) dUTP nick-end labeling (TUNEL) assay was used to estimate the effect of PRP on BMSCs cell apoptosis according to the manual [21 (link)]. After 48 h of culture with the serum-free medium in the presence or absence of PRP, the cells were fixed with 4% paraformaldehyde for 25 min at 37 °C, incubated with 0.3% Triton X-100 for 5 min, and washed with PBS twice between each step. The cells were incubated with TUNEL reagent (C1086, Beyotime, Shanghai, China) according to the manufacturer’s instructions, and the nuclei were counterstained with DAPI (C1002, Beyotime) for five minutes. The samples were observed and imaged under a fluorescence microscope (Olympus IX 71).
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2

TUNEL Assay for Cell Apoptosis

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Endogenous nuclease is activated when cell apoptosis begins. Therefore, the DNA chain was cut to form 180 to 200 bp DNA fragments. The terminal deoxynucleotide transferase dUTP nick-end labeling (TUNEL) assay involves the specific addition of fluorescently labeled UTP to the 3′-end of the DNA fragments using terminal deoxynucleotidyl transferase. For measurements, the treated cells were washed with PBS twice, fixed in 4% paraformaldehyde for 20 min, and washed twice with PBS for 5 min each, at room temperature. The cells were then incubated at 4 °C for 5 min in citrate buffer (0.1% Triton X-100 in 0.1% sodium citrate), followed by washing twice with PBS at room temperature for 5 min each time. The TUNEL reagent (Beyotime, China) was prepared by mixing 5 µL of enzyme solution with 45 µL of labeling solution. Then, 50 µL of TUNEL reaction mixture was added per sample containing approximately 106 cells. The mixture was incubated in the dark for 1 h at 37 °C. Then, the TUNEL reagent was removed, and the cells were washed twice with PBS, 5 min each time at room temperature. The washed cells were immediately viewed using a fluorescence microscope (Crowley et al. 2016 ).
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3

Apoptosis Analysis in Tumor Tissues

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The tumor tissues were fixed with 4% paraformaldehyde and embedded in paraffin. Then, sections cut from tumor tissues were stained with TUNEL reagent (Beyotime, China, C1098) according to the manufacturer's protocol. The slides were viewed under a light microscope, and images from randomly selected areas were analyzed.
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4

TUNEL Assay for Cell Apoptosis

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The tissue from rat model under different treatment conditions was fixed with 4% paraformaldehyde in PBS, permeabilized by 0.1% Triton X-100 and followed by treating with TUNEL reagent (Beyotime Institute of Biotechnology, Haimen, China) and then, incubated for 30 min at room temperature. Images were captured using a BX53 microscope (Olympus Corporation, Tokyo, Japan). The cell nuclei were stained with Alexa Fluor 647 and DAPI. The percentage of TUNEL-positive cells in the total cell population was calculated.
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5

Quantifying Neuronal Apoptosis via TUNEL

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The terminal deoxynucleotidyl transferase-mediated dUTP nick end labeling (TUNEL) method was used to determine cell apoptosis of neurocytes in brain tissues. The brain tissues (50 mg) of rats in different groups were fixed in 4% paraformaldehyde for 30 min and washed with PBS. After being incubated at 4°C for two minutes, the samples were dehydrated with decreasing percentages of ethanol (100%, 95%, 90%, 80%, and 70%) and then washed with PBS three times. Afterwards, the brain samples were incubated with 50 μL TUNEL reagent (Beyotime Biotechnology Co., Ltd., Shanghai, China) at 37°C in the dark for 60 min. After washing with PBS, 0.2 mL reaction stop buffer was added, and the mixture was incubated at 20°C for ten minutes. Then, 50 μL working liquid was added and then incubated at 20°C in the dark for 30 min. Thereafter, the samples were redyed with haematoxylin for five minutes. After being washed with PBS three times (five minutes each time), the cell apoptosis of the neurocytes was observed under a 400× fluorescence microscope.
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6

Quantifying DNA Damage with TUNEL Assay

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The terminal deoxynucleotidyl transferase (TdT) dUTP nick end labeling (TUNEL) assay is often used to detect the level of DNA damage. The cells were fixed with 4% paraformaldehyde for 25 min at 37 °C, incubated with 0.1% Triton X-100 for 8 min, and washed with PBS twice between each step. The cells were incubated with TUNEL reagent (Beyotime, China, catalog No. C1088) according to the manufacturer’s instructions, and the nuclei were counterstained with 4',6'-diamidino-2-phenylindole (DAPI, Sigma, United States, catalog No. D-9542) after the required time. The samples were observed and imaged under a fluorescence microscope (Olympus Europe GmbH, Germany).
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7

Apoptosis Quantification in Brain Tissue

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For TUNEL staining, brain sections were incubated in 4% paraformaldehyde blocking for 30 min at room temperature, then incubated with rabbit anti-NeuN (1:200) overnight at 4°C. Afterward, Alexa-Fluor 488 goat-rabbit IgG was used as the corresponding secondary antibodies for 1 h at the room temperature. The sections were incubated with the TUNEL reagent (Beyotime Biotechnology, Shanghai, China) for 1 h at 37°C. Then the slides were stained with DAPI for 15 min to show the location of nucleus. The number of TUNEL-positive neurons was regarded as apoptosis index. The fluorescently stained cells were imaged on an Olympus IX71 inverted microscope system and analyzed using the Image-Pro Plus 6.0 software (Media Cybernetics, Silver Spring, MD, United States).
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8

Evaluation of Podocyte Apoptosis via TUNEL Assay

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To investigate the effects of DSG on the apoptosis of podocyte cells, a TUNEL assay (cat. no. C1082; Beyotime Institute of Biotechnology) was employed. Briefly, CIHP-1 cells (2x104 cells/well) seeded into a 24-well plate were fixed with 4% paraformaldehyde for 15 min and permeabilized in 0.25% Triton X-100 for 20 min at room temperature. After rinsing in phosphate-buffered saline (PBS; cat. no. C0221A; Beyotime Institute of Biotechnology) three times, the cells were labeled with TUNEL reagent for 60 min at 37˚C, according to the manufacturer's instructions. DAPI staining solution (1 mg/ml; cat. no. C1002; Beyotime Institute of Biotechnology) was utilized to counterstain the cells at 37˚C for 30 min, which were then mounted in an anti-fade reagent (Beijing Solarbio Science & Technology Co., Ltd.). Finally, the images of TUNEL-positive cells were observed in five fields of view selected at random under a fluorescence microscope.
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9

TUNEL Assay for Apoptotic Cell Detection

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4% paraformaldehyde was used to fix frozen heart tissues and then the frozen sections were washed for two times with phosphate buffer solution (PBS). Then, frozen sections were put into PBS containing 0.3% Triton X-100. 50 μl TUNEL reagent (C1089, Beyotime Biotechnology, China) was added for staining cells. The labeled cells were regarded as apoptotic cells. Finally, the fluorescence microscope (Olympus, Japan) was used to take photograph of positive cells within six different random views [27 (link)].
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10

Immunofluorescence Assay for Cell Proliferation and Apoptosis

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The media of prepared HSFs were discarded, and pre-cooled methanol was added to fix the cells for 30 min at room temperature. Cells were incubated with PBS containing 0.2% Triton X-100 for 15 min at room temperature for permeabilization, and with TBST (0.5% Tween-20) containing 1% BSA for 30 min at room temperature for blocking. For Ki67 staining, the cells were incubated with a primary anti-Ki67 antibody (1:100; cat. no. ab197234; Abcam) at 4˚C overnight followed by incubation with the corresponding CY3-conjugated secondary antibody (1:2,000; cat. no. ab6939; Abcam) at 37˚C for 2 h. For TUNEL staining, the cells were incubated with a TUNEL reagent (Beyotime Institute of Biotechnology) at 37˚C for 1 h. Finally, after the nuclei were counterstained with DAPI (1:1,000; Beyotime Institute of Biotechnology) for 10 min at room temperature, the slides were mounted with Antifade Mounting Medium (Beyotime Institute of Biotechnology). Images of each slide were captured at three random fields of view using an inverted fluorescence microscope (magnification, x100; IX73; Olympus Corporation). Total nuclei (blue) and Ki67 or TUNEL-positive (red) cells were quantified using ImageJ software (version 1.51w; National Institutes of Health).
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