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37 protocols using fluorescence spectrophotometer

1

Monitoring Aggregation Propensity of Denatured Luciferase

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To monitor aggregation propensity of urea-denatured luciferase and MLucV, 30 µM luciferase or MLucV was incubated with 4 M urea at 25 °C for 10 min, then diluted to a final concentration of 1 µM in buffer A (50 mM HEPES-KOH pH 7.5, 150 mM KCl, 10 mM MgCl2, 2 mM DTT), immediately aggregation was monitored by light scattering at 340 nm at 30 °C for 30 min using Perkin Elmer Fluorescence Spectrophotometer. To monitor aggregation propensity of heat-denatured luciferase and MLucV, MLucV or luciferase (0.5 µM) was kept at 38 °C in Buffer A with 4 µM BSA and aggregation was monitored by light scattering at 340 nm for 30 min using Perkin Elmer Fluorescence Spectrophotometer.
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2

Measurement of Cellular ROS Levels

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Yeast strains were grown overnight in liquid medium before dilution in 10 ml of required medium at a starting OD600 of 0.1. The cultures were allowed to grow at 30°C until they reached OD600 of 1.0. Dichlorofluorescin diacetate (DCFDA), 20 μM, was added to the cultures and further incubated for 1 h at 30°C. Next the cells were washed and suspended in 100 μl of PBS. The intensity of fluorescence was measured in a fluorescence spectrophotometer (PerkinElmer, Waltham, MA) with an excitation wavelength of 480 nm and an emission wavelength of 525 nm; the emission was taken as the total ROS level.
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3

Evaluating Insulin Resistance Modulation

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Insulin resistance was induced in the cells by treating them with a 0.75 mM palmitate working solution for 16 h and subsequent incubation with the following concentrations of HM-chromanone: HM-chromanone + 10 µM compound C or HM-chromanone + 20 µM wortmannin for 24 h. Glucose uptake was initiated by the addition of 10 μM 2-(N-(7-nitrobenz-2-oxa-1,3-diazol-4-yl) amino)-2 deoxyglucose (2-NBDG, Invitrogen, Carlsbad, CA, USA). Glucose uptake was measured by a fluorescence spectrophotometer (Perkin Elmer, Boston, MA, USA) set at excitation and emission wavelengths of 485 nm and 535 nm, respectively.
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4

Fluorescence Spectroscopy of Recombinant Protein

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A Perkin Elmer fluorescence spectrophotometer (Perkin–Elmer Corporation, Connecticut, USA) instrument and 0.5 cm × 0.5 cm quartz cuvettes were used to obtain fluorescence spectra of the recombinant G4LZI3 protein based on the method described earlier, with modifications.19 (link)
The spectra were documented at a protein concentration of 0.10 mg/mL in 50 mM Tris-HCl buffer (pH 7.0) at room temperature. Tris-HCl buffer was used as blank, while the excitation wavelength was 270 nm. The intrinsic fluorescence emission scanning was documented within the wavelength of 200-450 nm.
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5

Physicochemical Characterization of Nanoparticles

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A Zetasizer Nano-ZS90 (Malvern, UK) was used to measure the size and zeta potential of samples. Scanning electron microscopy (SEM, Quanta 200 FEG, Portland, OR, USA), transmission electron microscopy (TEM, Tecnai-F30, Portland, OR, USA), and atomic force microscope (AFM) were used to study the morphology of samples. The drug release rate and loading efficiency were obtained using fluorescence spectrophotometer (PerkinElmer, Waltham, MA, USA). X-ray powder diffraction (XRD) measurements were recorded by D2 PHASER Bruker AXS GmbH (Karlsruhe, Baden-Württemberg, Germany).
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6

NF-κB Activation Assay in BV2 Cells

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Lipofectamine 2000 transfection reagent (Thermo, Waltham, MA, USA) and DNA were respectively diluted into equal amount of Opti-MEM medium (Thermo, Waltham, MA, USA). Diluted Lipofectamine 2000 transfection reagent was mixed with DNA, and then incubated for 20 min at room temperature. After that, the complex was added to cells, and incubated for 6 h at 37 °C. Thus, BV2 microglial cells were co-transfected with 12 μg Renilla plasmids and 12 μg NF-κB plasmids transiently with Lipofectamine 2000 transfection reagent (60 μL) for 48 h. BV2 microglial cells were subsequently treated with gradient concentration of CTL (0, 2.5, 5, and 10 μM) and 1 μg/mL of LPS or vehicle for overnight. Soon thereafter, cells were lysed, and dual luciferase reporter gene assay kit (Bioassaysys, Hayward, CA, USA) was used for detecting NF-κB reporter gene luciferase activity, and analyzed on a fluorescence spectrophotometer (PerkinElmer, Waltham, MA, USA).
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7

Liposome Disruption Assay for ER and Plasma Membranes

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Generation of liposomes mimicking the membrane composition of the endoplasmic reticulum (ER) and plasma membrane, and liposome disruption assays, was carried out as described [31 (link), 32 (link)]. All lipids were procured from Avanti Polar Lipids (Alabaster, AL, USA). For the assay, GST-6K, at a concentration of 0.1 μM to 10 μM, was incubated in the presence of dye-encapsulated liposomes for 30 minutes at 25°C, and end-point fluorescence was monitored at 585 nm. Purified GST was used as a control in all experiments. Experiments were carried out in triplicates on a Perkin Elmer fluorescence spectrophotometer using a quartz cuvette.
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8

ROS Measurement in HepG2 Cells

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Cellular ROS levels were measured using a DCFH-DA fluorescent probe (9 (link)). HepG2 cells were seeded into 96-well black plates at a density of 5×104 cells/well. After sample treatment, 25 μM DCFH was added to the wells for 2 h. Cells were washed twice with FBS-free medium before the addition of 1 mM TBHP. The fluorescence intensity was measured with a fluorescence spectrophotometer (Perkin-Elmer, Norwalk, CT, USA) for 90 min at an excitation wavelength of 485 nm and an emission wavelength of 530 nm.
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9

Intestinal Permeability Assay in Mice

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Mice were fasted overnight before gavage with FITC-dextran (600 mg/kg; ~4000 MW, Sigma-Aldrich), with food supply restored 2-hrs post-gavage. 2-hrs later, serum was separated from blood samples by centrifugation (2300 xg, 5mins, room temperature (RT)), and diluted 1:1 in PBS in a 96-well plate. Serum FITC-dextran concentrations were determined using a fluorescence spectrophotometer (Perkin Elmer), with serum samples from non-FITC-dextran-gavaged mice used as baseline. Standard curves were generated using known concentrations of FITC-dextran diluted in control serum. Concentrations were determined using linear regression of a standard curve.
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10

Fluorescence Characterization of Amino Acids

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Fluorescence measurements were recorded at room temperature with a Perkin Elmer fluorescence spectrophotometer. The excitation wavelength was 285 nm, and the emission and excitation slit widths were set at 6 and 3 nm, respectively. The fluorescence spectra were obtained in the range of 290–550 nm at an integration time of 1.0 s/nm. The measurements were performed by adding small aliquots of amino acid derivatives with a 0.0025% concentration.
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