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7 protocols using anti cd86 gl 1

1

Multiparameter Flow Cytometry Analysis

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The following antibodies were used for cell surface staining: anti-CD4 (RM4-5, BioLegend), anti-CD19 (1D3, BioLegend), anti-CD38 (90, eBio), anti-CD138 (281–2, BD), anti-CD86 (Gl1, Biolegend), anti-Ter119 (TER-119, eBio), anti-GL7 (GL-7, eBio), anti-mouse IgD (11–26, eBio) anti-mouse IgM (11/41, eBio), anti-PD1 (J43, eBio), anti-CD43 (1B11, BioLegend), CD62L (MEL-14, BioLegend). Following surface staining, intracellular staining was performed with the FOXP3 permeabilization and fixation kit from eBiosciences according to the manufacturers recommendations using the following antibodies: Ki-67 (SolA15, BD) or FOXP3 (FJK-16s, eBio). FOXP3 expression in cells from FOXP3-DTR mice was also analyzed by GFP expression. Lymphocyte populations were initially gated on the basis of forward scatter versus side scatter. B cells were gated as CD19+CD4- cells within the lymphocyte gate. GC B cells were gated as CD38-GL7+ cells within the B cell gate and plasmablasts were gated as CD38+CD138+ cells within the B cell gate. CD4 T cells were gated as CD4+ cells within the lymphocyte gate. See S1 Fig for gating strategies. Flow cytometic data were collected with an LSRII (BD Biosciences) and analyzed using FlowJo software (Tree Star).
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2

Multiparametric Flow Cytometry Analysis

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The harvested spleens were mashed and single-cell suspensions of the spleens were stained with the following surface antibodies: anti-CD45 (30-F11, BD Biosciences), LIVE/DEAD Fixable Blue cell stain (Invitrogen), anti-CD19 (ID3, BD Biosciences), anti-CD8a (53-6.7, BioLegend), anti-CD27 (LG7F9, eBioscience), anti-CD11b (M1/70, BioLegend), anti-CD11c (HL3, BD Biosciences), anti-CD86 (GL1, BioLegend), anti-NK1.1 (PK136, BioLegend), anti-NKp46 (29A1.4, BioLegend), anti-MHC Class II (M5/114.15.2, BD Biosciences), anti-F4/80 (BM8, BioLegend), anti-CD80 (16-10A1), anti-CD3 (17A2, BioLegend), anti-CD4 (RM4-5, Invitrogen), anti-CTLA-4 (UC10-4B9, BioLegend), anti-PD-1 (29F.1A12, eBioscience), anti-CD28 (37.51, BioLegend), anti-CD44 (IM7, BD Biosciences), anti-CD43 (1B11, BioLegend), anti-CD47 (miap301, BioLegend), anti-CD62L (MEL-14, BioLegend), anti-CD25 (PC61.5, eBioscience), and anti-CD107a (1D4B, BioLegend). Intracellular staining was then performed with a FOXP3 permeabilization and fixation kit (eBioscience) according to manufacturer’s recommendations using the following antibodies: Ki-67 (B56; BD Biosciences) and GrB (QA16A02, BioLegend). Flow cytometric data were collected with a Beckman Coulter Cytoflex LX (6-L NUV) flow cytometer and analyzed using FlowJo software (Tree Star).
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3

Multiparametric Immune Cell Analysis

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Cell surface and intracellular staining of CD8+ T cells was performed as previously described (41 (link), 42 (link)) using the following antibodies (BioLegend, San Diego, CA, USA): anti-CD8 (53-6.7), anti-GzmB (GB11), anti-IFNγ (XMG1.2), anti-IL-2 (JES6-5H4) and anti-TNFα (MP6-XT22). Dead cells were excluded from analysis (positive for fixable viability dye, Thermo Scientific). For phenotypic analysis of BM-DCs, surface staining was performed with anti-CD11b (M1/70, BioLegend), anti-CD11c (N418, Miltenyi Biotec), anti-CD80 (16-10A1, BioLegend), anti-CD86 (GL-1, BioLegend) and anti-MHC class II (M5/114.15.2, Miltenyi Biotec), and intracellular staining was performed using anti-IL-6 (MP5-20F3, BioLegend). Fluorescence minus one (FMO) controls were used for all conditions. Data were acquired on a FACS Canto II flow cytometer (BD Biosciences, Heidelberg, Germany) and analyses were performed using Flow Jo (BD Biosciences) software.
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4

Synthesis and Characterization of Pam2LPs

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Pam2LPs were synthesised, as described previously.14 (link) Poly(I:C) was purchased from GE Healthcare Life Sciences (27-4732-01).
EndoGrade® Ovalbumin was purchased from Hyglos (321001). Anti-TLR2 Ab (Clone:
6C2; cat. no. 12-19021-80) and a mouse IFN-γ ELISA KIT (88-7314) were purchased
from eBioscience. ViaProbe was purchased from BD Biosciences (555816).
Carboxyfluorescein diacetate succinimidyl ester (CFSE) was purchased from
Molecular Probes (C1157). The following Abs were purchased from BioLegend:
anti-CD3ɛ (145-2C11, 100314), anti-CD8α (53-6.7, 100712), anti-CD11c (N418,
117310), anti-CD16/32 (93, 101302), anti-CD28 (37.51, 102111), anti-CD40 (3/23,
124607), anti-CD80 (16-10A1, 104707), anti-CD86 (GL-1, 105005) and anti-TCR
Vβ5.1,5.2 (MR9-4, 139504). An anti-TLR6 Ab (418601, MAB1533) was purchased from
R&D Systems.
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5

Multicolor Flow Cytometry Profiling

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Cell suspensions were stained on ice for 20 min in the dark with various combinations of fluorochrome-conjugated antibodies, including anti-CD45 (30-F11), anti-CD11b (M1/70), anti-F4/80 (BM8), anti-Ly6G (1A8), anti-Ly6C (HK1.4), anti-MHC II (M5/114.15.2), anti-CD11c (N418), anti-CD206 (MMR), and anti-CD86 (GL-1) (all from BioLegend, San Diego, CA, USA). Samples were acquired on a FACS Canto II flow cytometer (BD, Franklin Lakes, NJ, USA). Data were analyzed using the FlowJo™ Software (BD).
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6

Flow Cytometric Analysis of Activated Immune Cells

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Cell surface staining was performed using the following antibodies: anti-CD11b (M1/70, Miltenyi Biotec), anti-CD11c (N418, BioLegend) anti-CD3 (17A2, eBioscience), anti-CD49b (DX5, eBioscience), anti-CD69 (H1.2 F3, eBioscience), anti-CD86 (GL-1, BioLegend), anti-MHC-II (M5/114.15.2, Miltenyi Biotec), anti-NK1.1 (PK136, BD Bioscience). Dead cells were excluded from analysis (positive for fixable viability dye, eBioscience). For detection of activated T cells splenocytes were stained with anti-CD4 (GK1.5, eBioscience), anti-CD8 (53–6.7, eBioscience), anti-CD43 (1B11, BioLegend) and anti-CD62L (MEL-14, eBioscience). Intracellular IFN-γ (XMG1.2, Miltenyi Biotec), IL-2 (JES6-5H4, Miltenyi Biotec) and TNF-α (MP6-XT22, BioLegend) staining was performed as described [28 (link),29 (link)]. Data were acquired on LSR II flow cytometer (BD Bioscience) and analyses were performed using FACSDiva (BD Bioscience) and Flow Jo (Tree Star, USA) software.
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7

Multiparametric Flow Cytometry Analysis

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Cellular suspensions from the tissues were prepared as described previously in 2. The following antibodies were used: anti-CD19 (1D3, #45-0193-80, eBioscience), anti-B220 (RA3-6B2, #RM2630, Life Technologies), anti-CD45 (104, #109825, Biolegend), anti-CD1d (1B1, #123507, Biolegend), anti-CD140 (APA5, #135905, Biolegend), anti-CD21 (7E9, #123419, Biolegend), anti-CD5 (53-7.3, #100607, Biolegend), anti-AA4.1 (#17-5892, eBioscience), anti-CD138 (281-2, #142505, Biolegend), anti-CD206 (C068C2, Biolegend), anti-CD86 (GL-1, Biolegend), anti-F4-80 (BM8, Biolegend), anti-CD11b (M1-70, Biolegend). Dead cells were excluded by staining with Propidium Iodide (Sigma-Aldrich) or Aqua Live/Dead stain. Flow cytometry was performed on FACScalibur and LSRII II (BD Biosciences) instruments at NYU School of Medicine Flow Cytometry Core Facility and data was analyzed using FlowJo software.
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