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5 protocols using eif4g1

1

Protein Expression Analysis of NPC Cells

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NPC cells with indicated transfection were lysed in radio-immunoprecipitation assay (RIPA) lysis buffer (Santa Cruz, Dallas, TX, USA) for half an hour on ice. Excised xenograft tumors were homogenized and lysed in RIPA lysis buffer (Santa Cruz) for 1 hon ice. The supernatants were harvested after centrifugation at 10,000 g for 15 min. Protein was quantified with BCA assay kit (Thermo Fisher Scientific). Thirty micrograms of protein was loaded, electrophoresed, and transferred to polyvinylidene fluoride (PVDF) membrane (Bio-Rad, Hercules, CA, USA). Membranes were then blocked in 5% bovine serum albumin (BSA) solution for 1 h. After wash, membranes were incubated with primary antibodies against E-cadherin (1:1000, Abcam), N-cadherin (1:1000, Abcam), Snail (1:500, Abcam), c-Myc (1:500, Abcam), Cyclin D1 (1:2000, Abcam), Survivin (1:1000, Abcam), MET (1:1000, Abcam), phosphorylated MET (1:1000, Abcam), eIF4G1 (1:500, Abcam), phosphorylated eIF4G1 (1:500, Abcam) and GAPDH (1:4000, Abcam) at 4 °C overnight respectively. On the second day, membranes were incubated with horseradish peroxidase (HRP)-conjugated secondary antibodies for 1 h, which was visualized using enhanced chemiluminescence (ECL) substrates (Bio-Rad). Band intensity was quantified with ImageJ software. GAPDH was used as a normalization control.
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2

Antibody-based Protein Interaction Analysis

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The antibodies used were LDH (Santa Cruz, sc-133123), Histone H3 (Abcam, ab1791) Actinin (Santa Cruz, sc-17829), Streptavidin-HRP (Cell Signaling 3999S), eIF3A (Abcam, ab118357), eIF4A1 (Abcam, ab31217), FXR1 (Abcam, ab129089), PABP (Abcam, ab21060), eIF5A (Abcam, ab32443), eIF2α (Invitrogen, AH00802), eIF4G1 (Abcam, ab2609), P53 (Santa-Cruz, sc-126 X), eIF4A3 (Abcam, ab32485), eIF4E (Cell Signaling, 20675), RPS6 (Abcam, ab58350), eIF3D (Abcam, ab12442), S6K1 (Abcam, ab32529), S6K1pT389 (Abcam, ab2571), RPS6pS235 (Abcam, ab12864), KDM5A (Abcam, ab70892). KDM4A and β-Actin antibodies were described in (23 (link)). MCM7 antibody was described in (8 (link)). KDM4A immunoprecipitations were performed with KDM4A-P006.
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3

Metabolic Regulation in Cancer Cells

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Antibodies of PHGDH, SHMT1, eIF4A1, eIF4G1 and eIF4E were purchased from Abcam; antibodies of ZO-1 and E-cadherin were purchased from Cell Signaling Technology. 13C6 glucose was purchased from Sigma-Aldrich (St. Louis, MO). Inhibitor CBR5884 was purchased from TOCIRS; inhibitor 4EGI-1 was purchased from Selleck; cisplatin and paclitaxel were purchased from J&K.
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4

Immunohistochemical Analysis of Tumor Markers

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Tumor tissues were fixed in 4% formaldehyde solution, dehydrated in gradient ethanol solution, embedded in paraffin, and cut into 5-µm sections. After antigen retrieval, sections were incubated in H2O2 solution for 10 min, washed and incubated with primary antibodies against Ki-67 (1:100, Abcam), MET (1:200, Abcam), and eIF4G1 (1:100, Abcam) for 16 h. Sections were then incubated with HRP-conjugated secondary antibody (1:1000, Thermo Fisher Scientific). DAB substrate was added to visualize the signal. After wash, sections were stained with hematoxylin and imaged using a BX51 microscope (Olympus).
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5

Western Blot Analysis of Cell Lysates

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Total cell lysates (20μg) were resolved by 10% SDS–PAGE, transferred to nitrocellulose membranes and immunoblotted with antibodies for EIF4G1, NRG1 (Abcam), MUC1 (Proteintech), phosphor‐ and total‐p65 (Cell Signaling, Danvers, MA, USA, Cat. #3033 and #4764, respectively) and β‐Actin (Sigma‐Aldrich, Cat. #SAB5500001) for loading controls. Immunoreactive bands were identified using an enhanced chemiluminescence reaction (Perkin‐Elmer, Waltham, MA, USA) and visualized by autoradiography.
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