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Dam system

Manufactured by Trikinetics
Sourced in United States

The DAM system is a data acquisition and monitoring device designed for laboratory use. It is capable of recording and analyzing various types of data.

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26 protocols using dam system

1

Measuring Fly Locomotion Behavior

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The locomotion activity was measured by the DAM system (TriKinetics Inc, Waltham, MA), which allows a measure of fly locomotion capabilities based on their negative geotactic response, as the number of climbing performances in 30 min; 10–15 ageing-synchronized male flies (2–3 days, 7 days, or 15 days of age) were gathered and placed in each monitor for each genotype for each experiment. Briefly, the DAM system (TriKinetics Inc) records activity from individual flies maintained in sealed tubes placed in activity monitors. An infrared beam directed through the midpoint of each tube measures an ‘activity event’ each time a fly crosses the beam. The number of climbing events was scored for 30 min, tapping flies to the bottom every 40 s. Events detected over the course of each consecutive sampling interval are summed and recorded over the course of 30 min for each fly.
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2

Fly Locomotion and Flight Assays

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For the flying assay in Fig. 4c, twenty adult male flies at 14 days old were placed in individual vials (93 mm height × 350 mm2 area) at noon and left at rest for 20 min. Flies were dropped down to the bottom by gently tapping, and flight events during 30 s were recorded. Locomotor behavior in Supplementary Fig. 4b was recorded in polycarbonate tubes containing light-shielded fly food with 100 µM retinal using the DAM system (Trikinetics)42 (link). The behavior of single male flies preconditioned at 25 °C under a 12-hr light:dark cycle condition for 14 days was individually recorded for 1 additional day. Light irradiation was performed during the light period. For a climbing assay in Fig. 4e, vials (25 mm diameter × 180 mm height) containing 20–25 flies were tapped gently on the table and left standing for 18 s. The number of flies that climbed at least 60 mm was recorded43 (link).
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3

Mosquito Flight Activity Monitoring System

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Mosquitoes were reared at 28 °C, 80% relative humidity under a 12:12 h light:dark regime, and measurements of flight activity were performed using a Drosophila Activity Monitoring (DAM) System (TriKinetics, LAM25) and DMASystem3 software (TriKinetics) using large tubes designed for mosquitoes (TriKinetics, PGT 25 × 125 mm Pyrex Glass). Individual 4–7-day-old, non-blood-fed virgin ♀ and non-mated ♂ mosquitoes were introduced into the monitoring tubes, which contained 10% sucrose (Sigma, Cat. No. S0389) at both ends of the tube as the food source. The DAM System was positioned vertically during the assays. Flight activity was measured over a period of 24 h by automatically calculating the number of times that mosquitoes passed through the infrared beam in the center of the tubes. The walls of the monitoring tubes were coated with Sigmacote (Sigma, Cat. No. SL2) to inhibit mosquitoes from walking upward. For preparing the wingless mosquitoes, the animals were anesthetized on ice, and the wings were removed using Vannas Scissor (World Precision Instruments, Cat. No. 14003). The wingless mosquitoes were allowed to recover for 12 h before recording. Mosquitoes were manually checked after flight activity recording to ensure survival. Data acquisition was performed using the DAM System (TriKinetics) (Fig. 2D, Supplementary Video 5, and Supplementary Table 6).
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4

Behavioral Assays for Fly Sleep Modulation

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All behavioral tests were performed using individual male flies, unless otherwise indicated. Each fly was housed in a 65 × 5 mm glass tube containing 5% sucrose and 2% agar (behavior food). For amino acid supplements, the indicated amount of each amino acid was dissolved in the behavior food. For oral administration of GABA-T or GABA transporter inhibitors, 10 mM of EOS (Tokyo Chemical Industry) or 10 mg/ml of NipA (Sigma) was directly dissolved in the behavior food containing the indicated amount of threonine. For oral administration of GABA receptor agonists, 10 mg/ml of THIP (Tocris) or SKF-97541 (Tocris) stock solution was diluted into the behavior food at the indicated final concentration. Flies were fed on amino acid- and/or drug-containing behavior food in LD cycles at 25°C for 4.5 days. Locomotor activity was recorded using the DAM system (Trikinetics) and quantified by the number of infrared beam crosses per minute. Sleep bouts were defined as no activity for >5 min. Sleep parameters were analyzed using an Excel macro (Pfeiffenberger et al., 2010 (link)).
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5

Fly Locomotor Activity in DD

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Fly locomotor activity was recorded in 5 min bins, using the DAM system (TriKinetics). Data analysis was performed using custom-written scripts in IgorPro (Wavemetrix). Sleep was defined as periods of immobility >5 min. Sleep latency was calculated for each fly on each day as the time from CT12 until the first sleep bout. Locomotor activity was calculated as the average number of beam crossings per 30 min bins and averaged for each genotype over the first 5 days in DD.
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6

Circadian Rhythms in Drosophila

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For locomotor activity experiments that included temperature induction, adult flies were entrained for 3 days in 12:12 LD cycles at 19°C and then transferred to DD at 25°C or 30°C. For other experiments, adults were entrained for 3 days in 12:12 LD cycles at 25°C before transfer to DD. Locomotor activity was recorded using the DAM system (TriKinetics, Waltham, MA) and we used χ2 analysis in ClockLab (Actimetrics, Wilmette, IL) to calculate the power above the significance line (p<0.01) for each fly. Flies with a power <100 were considered arrhythmic and excluded from period calculations but included in average power calculations. Flies were kept for 5 days at 30°C in 10:14 and 14:10 LD cycles for winter and summer conditions respectively. Activity data from the last 2 days were averaged, normalized and plotted using a bin size of 30min. Morning anticipation was measured as the activity 6hrs before dawn (ZT19–ZT24).
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7

Monitoring Circadian Rhythms in Drosophila

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Individual, 21-day-old, mated female flies were placed in glass tubes (65 mm × 5 mm) containing standard 1× SYA, and activity was recorded using the DAM System (Drosophila Activity Monitoring System; TriKinetics) as described previously [49 (link)]. Flies were entrained to a 12-hr:12-hr light:dark (LD) cycle at 25°C and 65% humidity 24–36 hr before recording. 5 days of the 12:12 hr LD cycle were recorded, followed by 5 days of a 12-hr:12-hr dark:dark (DD) cycle. Analysis of locomotor activity was performed using the fly toolbox and MATLAB software (MathWorks), as described previously [50 (link)]. Sleep was defined as a bout of inactivity lasting 5 min or more, and sleep analysis was performed with pySOLO [51 (link)]. All behavioral data (activity and sleep duration) are represented by mean values with their SEM.
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8

Drosophila Longevity and Locomotor Monitoring

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We used 15 space flown, 31 control-1 and 32 control-2 flies for behavioral and lifespan testing. Flies were first loaded into locomotor activity monitoring tubes containing 5% sucrose/1% agar food and incubated under LD conditions with the same phase as in the travel box for 5 days. After that, flies were transferred and maintained in constant darkness (DD) until all flies died. Every 5 days, flies were transferred into a new monitoring tube with fresh food in order to maintain the health of the flies during the lifespan test. Fly locomotor activity was monitored using a DAM system (Trikinetics, USA); total activity was calculated as the total bout number recorded by the DAM system; locomotor activity was analyzed using FaasX and Clocklab2 software (USA); sleep patterns and parameters were analyzed using Pysolo 0.9 software (USA), with sleep defined as an interval of 5 min or more of behavioral immobility; fly mortality was defined by the cessation of locomotor activity.
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9

Measuring Fly Sleep Patterns

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Flies were housed in Percival incubators (Perry, IA) and beam–break activity was recorded with the Trikinetics DAM system (http://www.trikinetics.com/). Pysolo (Gilestro and Cirelli, 2009 (link)) software was used to analyze and plot sleep patterns. Sleep deprivation was achieved through repeated mechanical shaking (2 s randomized shaking in every 20-s interval).
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10

Larval Light Avoidance and Adult Locomotion

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Larval light avoidance assays were carried out as in [9] (link). For adult locomotor activity experiments, adults were entrained to 12∶12 LD cycles at 25°C for at least 3 days before transfer to DD. Locomotor activity was recorded using the DAM system (TriKinetics, Waltham, MA).
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