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Hrp coupled secondary antibody

Manufactured by Cell Signaling Technology
Sourced in United States, Germany

HRP-coupled secondary antibodies are laboratory reagents used in immunoassays to detect and quantify target proteins. They consist of a secondary antibody covalently linked to the enzyme horseradish peroxidase (HRP). The HRP enzyme can catalyze a colorimetric or chemiluminescent reaction, providing a signal that is proportional to the amount of target protein present in the sample.

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37 protocols using hrp coupled secondary antibody

1

Gene Expression Analysis by qRT-PCR and Western Blotting

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Analysis of changes in gene expression was performed by quantitative real time PCR (qRT‐PCR). RNA was isolated using the RNeasy plus kit (Qiagen). Five hundred nanograms of mRNA were reverse transcribed using qScript cDNA synthesis kit (Quanta Biosciences). The resulting cDNA was analyzed on a RotorGene Q cycler (Qiagen) using PerfeCTa SYBR Green FastMix (Quanta Biosciences). For primer sequences see Table 1. The cycling program was 30 s 95°C for denaturing, followed by 45 cycles of 5 s 95°C, 15 s 56°C, and 10 s 72°C. Data analysis was performed by normalizing values to ß‐actin as a house‐keeping gene and comparing expression to normoxia (21% O2) exposure using the ΔΔCt method. Values generated by qPCR are given as “fold change compared to 21% O2.”
Protein levels were analyzed by SDS‐PAGE and western blotting. Transferred proteins were detected by primary anti‐ACE/CD143 (R&D Systems cat.nr. AF1513), anti‐ACE2 (R&D Systems cat.nr.AF3437), anti‐eNOS (Cell Signaling Technology cat.nr. 9,586), anti‐ß‐Actin (Cell Signaling Technology cat.nr. 3,700) and according to species‐specific HRP‐coupled secondary antibodies (Rockland, USA). Bands were visualized by chemiluminescence (ECL Select Western blotting Detection Reagent; Amersham; GE Healthcare) using a Gel Documentation System (Vilber Lourmat).
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2

Collagen and Fibronectin Quantification in Cell Cultures

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HK-2 and CCD-1092Sk cells in monoculture were seeded in 24-well-plates or respectively in coculture as described in 2.2. The cells were incubated with media enriched with 50 mg/l ascorbic acid to support collagen synthesis and 50 mg/l ß-aminoproprionitrile to avoid collagen polymerization, which improves collagen determination. Collagen and fibronectin concentration was measured in the media according to and normalized to cellular protein content [25 (link)]. Antibodies against collagen III (1:1000) and fibronectin 1 (1:2000) were obtained from Biomol. HRP-coupled secondary antibodies (1:5000) were obtained from Cell Signaling (see Table 1).
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3

Quantitative Western Blot Analysis of Complement Proteins

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Proteins were separated by SDS-PAGE and transferred to nitrocellulose membranes (GE Healthcare, #10600003). Membranes were blocked in TBST + 5% BSA, incubated in primary antibody in TBST + 5% BSA o/n at 4 °C. After incubation with HRP-coupled secondary antibodies (Cell Signaling Technology, #7074, #7076 S), blots were subjected to ECL reaction. Images were acquired using ChemoStar (INTAS Science Imaging Instruments GmbH) and contrast was adjusted using ImageJ (version 1.52d). The band with the strongest signal was set to maximum (black). Quantification of Western blot signals was performed with ImageJ (version 1.52.d). Primary antibodies and dilutions were: C1qA (#11602-1-AP; 1:2000), C1qB (#16919-1-AP; 1:2000), C1qC (#66268-1-Ig; 1:4000), C1R (#17346-1-AP; 1:2000), C1S (#14554-1-AP; 1:4000), C3/C3b/C3 (#21337-1-AP; 1:1000), CFP (#17192-1-AP; 1:1000), CRP (#66250-1-Ig; 1:10000), F2 (#24295-1-AP; 1:5000), F7 (#23058-1-AP; 1:1000), FGG (#15841-1-AP; 1:2000), MBL2 (#24207-1-AP; 1:2000), SAP (#20773-1-AP; 1:2000) (all from Proteintech).
APOB (#sc-393636; 1:200) and MASP-1/3 (#sc-166815; 1:200) were from Santa Cruz Biotechnology.
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4

Investigating TGFβ1 Signaling Pathways

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TGFβ1 was a kind gift from Dr F.W. Ruscetti (Biological Response Modifiers Program, FRCF, NCI, Maryland, USA). All fluorophore-coupled reagents (Alexa546-phalloïdin, Alexa488 anti-mouse IgG) were purchased from Invitrogen (Carlsbad, CA, USA). HDAC6 inhibitors (tubacin and CAY10603), SMAD3 inhibitor SIS3 and TGFBR inhibitor Galunisertib (LY2157299) were from Selleckchem (Houston, TX, USA). Cell nucleus stain 4′,6′-diamidino-2-phenylindole (DAPI) was from Invitrogen (Carlsbad, CA, USA). Anti-SMAD2, -SMAD3 and phosphoSMAD2(Ser465/467) and all HRP-coupled secondary antibodies were from Cell Signaling Technology (Boston, MA, USA). Anti-phosphoSMAD3(Ser423/425) was from Abcam (Cambridge, MA, USA). Anti-tubulin and anti-acetylated tubulin were from Sigma Aldrich (Oakville, ON, CA). Anti-SARA and anti-EEA1 antibodies were from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Rabbit TrueBlot was purchased from Rockland Immunochemicals (Limerick, PA, USA). Pimonidazole hydrochloride and anti-pimonidazole mouse antibody were purchased from Hypoxyprobe (Burlington, MA). ITGB2 blocking antibody was from Novus Biologicals (Centennial, CO, USA). Anti-DDK antibody was from Origene.
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5

Investigating AMPK-Mediated Signaling Pathways

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Antibodies directed against AMPKα (1/1000, Rabbit), ACC (1/1000, Rabbit), phospho-Ser79ACC (1/1000, Rabbit), phospho-PKA substrate (RRXS*/T*) (1/2000, Rabbit), phospho-AMPK substrate (1/1000, Rabbit), and phospho-Ser133CREB (1/1000, Rabbit) were obtained from Cell Signaling technology (Danvers, MA, USA). Anti phospho-Thr172AMPKα (1/1000, Rabbit), CREB (1/500, Rabbit), Arc (1/500, Mouse), c-Fos (1/500, Mouse), and EgrI (1/500, Rabbit) antibodies were from Santa-Cruz (Dallas, TX, USA). Anti-actin (1/15 000, Mouse) antibody was from BD Bioscience (Franklin Lakes, NJ, USA). HRP-coupled secondary antibodies directed against the primary antibodies’ hosts were obtained from Cell Signaling technology. Bicuculline (Bic), H 89, PKI 14-22 amide, NKY 80, SQ 22536, and KH 7 were purchased from Tocris (Bristol, UK), 4-aminopyridine (4-AP) was purchased from Sigma (St Louis, MO, USA), and Compound C (Cc) was from Santa Cruz (Dallas, TX, USA).
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6

Cardiac Protein Extraction and Analysis

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Isolated cardiomyocytes or tissue homogenates were lysed in 150 mM NaCl, 50 mM Tris pH = 7.4, EDTA 1 mM, EGTA 1 mM, Na4P2O7 5 mM, 10% glycerol, 1% triton, and protease and phosphatase inhibitors cocktail (Sigma, St-Quentin-Fallavier, France). Samples were then centrifuged at 3000 × g for 5 min to get rid of cell debris. Protein concentration was measured by the BCA Protein assay (Thermo-Scientific, Montigny-Le-Bretonneux, France).
Proteins were separated on NuPAGE Novex 10% or 4–12% Bis–Tris gels (Life Technologies) and transferred on nitrocellulose membrane (Biorad, Marnes-La-Coquette, France). Membranes were cut and each part was incubated with indicated antibodies. Incubations were performed with appropriate primary antibodies (see antibodies listing above) followed by HRP-coupled secondary antibodies (Cell Signal, St-Cyr, France). Proteins were revealed with ECL Prime (GE Healthcare, Velizy, France) and images were acquired using a LAS4000 Camera (GE Healthcare, Velizy, France).
We displayed cropped gels and blots in the main paper to improve the clarity and conciseness of the presentation. However, full-length unedited material was provided in the supplementary information, as mentioned in the figure legends.
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7

Antibody Inventory for Cell Signaling

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Antibodies used in this study are the following: anti‐GAPDH (sc‐32233), anti‐HSP90 (sc‐13119), anti‐Drp1 (H‐300), and anti‐caspase 3 (sc‐7148) from SantaCruz Biotechnology; anti‐phospho‐serine (4A4) from Millipore; anti‐OXPHOS/COX (MS604/G2594) from Mitosciences; and anti‐acetylated‐lysine (9441S), anti‐SIRT3 (D22A3), anti‐SIRT1 (1F3), anti‐COX IV (4844), and anti‐cleaved caspase 3 (9661) from Cell Signaling Technology. All antibodies were used at 1:1,000 for immunoblot and 1:100 for immunofluorescence. Fluorescent Alexa‐coupled secondary antibodies (used at 1:300) and DAPI were from Life Technologies. HRP‐coupled secondary antibodies (used at 1:3,000) were from Cell Signaling Technology. STA‐5326 was purchased from Axon MedChem and was referred to as STA throughout this study. All other chemicals were from Sigma‐Aldrich unless otherwise stated.
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8

Protein Extraction and Immunoblotting

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Cells were scraped, centrifuged, and pellets were re-suspended in lysis buffer (PBS and 1% Triton ×100) containing Halt Protease Inhibitor Cocktail and Halt Phosphatase Inhibitor Cocktail (Pierce Biotechnology, Inc., Rockford, IL) on ice. Protein concentration was measured using the Bradford Protein Assay (Bio-Rad Laboratories, Hercules, CA). Proteins (25 µg) from each sample were subjected to SDS/PAGE and transferred onto nitrocellulose membranes. Membranes were probed with specific primary antibodies and HRP-coupled secondary antibodies (Cell Signaling). Protein bands were visualized using a commercial Immobilon Western Chemiluminescent HRP Substrate kit (Millipore, Billerica, MA).
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9

Immunoblot Analysis of Cellular Proteins

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Protein lysates from total HeLa, HEK293 or 2D12 cells extracts were separated on 4–20% Bio-Rad Mini-PROTEAN® Precast Gels, electrophoretically transferred to nitrocellulose membranes (Bio-Rad Trans-Blot Turbo Transfer System) and subjected to immunoblot analysis with rabbit anti-NOA36 (1:1000), anti-α − tubulin (1:3000 of DM1A from SIGMA) anti-FLAG, (1:1000 of Asp175 from SIGMA), or anti-HA (1:3000 HA; ab9110 rabbit polyclonal antibody from AbCam). Following incubation of the membranes with 1:2000 HRP-coupled secondary antibodies (Cell Signaling), proteins were visualized by WesternBright Quantum (Advansta) in a UVP-biospectrum imaging system.
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10

Immunoblotting of Cellular Proteins

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p62 (clone D-3) mouse monoclonal antibody was from Santa Cruz. Mouse TXNRD1 (clone 1B10C4) and rabbit SRX1 (polyclonal) antibodies were purchased from Proteintech. HRP-coupled secondary antibodies were from Cell Signaling Technologies.
Cell lysates were lysed with NP40 lysis buffer (150 mM NaCl, 1% NP-40, 50 mM Tris-pH 8.0, plus protease inhibitors), followed by immunoblotting (IB) with indicated antibodies, and signals were detected with the enhanced chemiluminescence (ECL) kit following the manufacturer’s protocol (Amersham Pharmacia Biotech).
The broad-spectrum inhibitor of histone demethylases IOX1 was purchased from MedChemExpress.
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