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10 protocols using calu 3

1

Cell Culture Protocol for LUAD and Normal

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Human LUAD cells (H1650, A549, and Calu-3) and a normal cell BEAS-2B were purchased from BeNa Culture Collection (Suzhou, Jiangsu, China). All the cells were cultured in Roswell Park Memorial Institute (RPMI)-1640 (Thermo Fisher Scientific Company, Waltham, Massachusetts, USA) supplemented with 10% fetal bovine serum (FBS; Hyclone, Logan, UT) at 37 °C.
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2

Cultivation of NSCLC and HBE1 Cell Lines

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NSCLC cell lines, including A549, H1299, Calu-3, Calu-6 and normal human bronchial epithelial cell line HBE1 were all obtained from BeNa Culture Collection (Beijing, China). All cells were cultivated in Roswell Park Memorial Institute-1640 (RPMI-1640) medium (Gibco, Carlsbad, CA, USA) supplemented with 10% fetal bovine serum (FBS; Gibco), 100 units/mL penicillin and 100 μg/mL streptomycin in a 5% CO2 incubator at 37°C.
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3

Cultivation of Human Lung Cell Lines

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Human LUAD cell lines A549 (BNCC341254), Calu-3 (BNCC338514), PC-9 (BNCC340767), and PAa (BNCC341415) and human bronchial epithelial cell line BEAS-2B (BNCC338205) were all purchased from BeNa Culture Collection (BNCC). A549 and PAa cells were prepared in Roswell Park Memorial Institute-1640 (RPMI-1640) medium. Calu-3 cells were cultured in Minimum Essential Medium-Earle's Balanced Salts Solution (MEM-EBSS). PC-9 and BEAS-2B cells were cultivated in Dulbecco's Modified Eagle Medium-high glucose (DMEM-H) medium. The mediums used in this study all contained 10% fetal bovine serum (FBS) and were supplemented with 100 U/ml streptomycin (Gibco; Thermo Fisher Scientific, Inc.) and 100 U/ml penicillin (Gibco; Thermo Fisher Scientific, Inc.). Cells were cultured in an incubator at 37°C, with 5% CO2.
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4

Regulation of Lung Cancer Cell Lines by circCDR1as and SOX5

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Human lung cancer cell lines (A549, Calu‐3, CAEP and SK‐MES‐1) and human bronchial epithelioid cells (HBE) were purchased from BeNa Culture Collection (Beijing, China) and cultured in Dulbecco's Modified Eagle Medium (DMEM) (Solarbio, Beijing, China) containing 10% fetal bovine serum (Zhejiang Tianhang Biotechnology, Huzhou, China) and 1% penicillin‐streptomycin solution (Procell, Wuhan, China).
The overexpression vectors of circCDR1as and SOX5 were generated with pcDNA3.1 vector (pcDNA) (YouBio, Changsha, China). The pcDNA vector was used as a negative control. The short interfering RNA (siRNA) for circCDR1as (si‐circCDR1as#1, 5′‐GCAAUAUCCAGGGUUUCCGAU‐3′; si‐circCDR1as#2, 5′‐UGUCUGCAAUAUCCAGGGUUU‐3′), siRNA negative control (si‐NC, 5′‐UUCUCCGAACGUGUCACGU‐3′), miR‐219a‐5p mimic (miR‐219a‐5p, 5′‐UGAUUGUCCAAACGCAAUUCU‐3′), mimic negative control (miR‐NC, 5′‐UUCUCCGAACGUGUCACGUTT‐3′), miR‐219a‐5p inhibitor (anti‐miR‐219a‐5p, 5′‐AGAAUUGCGUUUGGACAAUCA‐3′) and inhibitor negative control (anti‐NC, 5′‐CAGUACUUUUGUGUAGUACAA‐3′) were generated by Fulengen (Guangzhou, China). A549 and Calu‐3 cells were transfected with these conducted oligonucleotides or vectors using Lipofectamine 3000 (Thermo Fisher, Wilmington, DE, USA) for 24 hours.
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5

Bronchial and Lung Adenocarcinoma Cell Lines

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Human bronchial epithelial cell line BEAS-2B (BNCC338205), and human LUAD cell
lines including A549 (BNCC337696), Calu-3 (BNCC338514), and NCI-H1299
(BNCC100268) were all provided by BeNa Culture Collection (Beijing, China).
Cells were all incubated in DMEM (Invitrogen) with 10% fetal bovine serum (FBS)
under standard conditions. Cells at the fourth passage were used for follow-up
experiments.
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6

Overexpression of Circ_0072309 in NSCLC

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Normal human bronchial epithelial cell line (HBE, BNCC338600) and four human NSCLC cells lines including CALU3 (BNCC338499), H125 (BNCC100831), A549 (BNCC100258) and H1299 (BNCC100268) were purchased from BeNa Culture Collection (Beijing, China). Cells were maintained in Roswell Park Memorial Institute-1640 (RPMI-1640, Invitrogen, Thermo Fisher Scientific, Waltham, MA, U.S.A.) containing 10% fetal bovine serum (FBS, Gibco, Grand Island, NY, U.S.A.) under the atmosphere containing 5% CO2 at 37°C.
Circ_0072309 was inserted into the pcDNA3.1 vector (pcDNA3.1-circ_0072309) to construct circ_0072309-overexpressing vector. For circ_0072309 overexpression, cells were transfected with pcDNA3.1-circ_0072309 (circ_0072309) or empty pcDNA3.1 (Vector). The miR-580-3p mimic and miR-NC were purchased from GenePharma (Shanghai, China). The transfections were performed using Lipofectamine 3000 (Invitrogen, Carlsbad, CA, U.S.A.) according to the manufacturer’s instructions. After 48 h, cells were collected for follow-up experiments.
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7

Investigating miR-218-5p in Human Lung Cancer Cell Lines

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Human LUAD cell lines PC-9 (BNCC330767), A549 (BNCC337696), SPC-A-1 (BNCC100120), Calu-3 (BNCC359757), and human umbilical vein endothelial cells (HUVEC, BNCC337616) were supplied by BeNa Culture Collection (Beijing, China). Human lung cell line HLF-a was obtained from Procell (CL-0359, Wuhan, China). Dulbecco’s Modified Eagle Medium (DMEM, Gibco, USA) containing 10% fetal bovine serum (FBS) (Thermo Scientific HyClone, USA) was utilized for cell culture at 37°C with 5% CO2.
The miR-218-5p mimics and negative control (NC micmic) were designed by GenePharma Biotech (Shanghai, China). In the present study, all transfections were transient. JetPRIME reagent (Polyplus-transfection) was added to cells. After transfected with RNA oligonucleotides for 48 h, cells were gathered for subsequent detection.
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8

LUAD Cell Lines Transfection Protocol

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LUAD cell lines H1650 (BNCC100260), Calu-3 (BNCC338514), A549 (BNCC337696), H1975 (BNCC100301), and human bronchial epithelial cell line BEAS-2B (BNCC338205) were bought from BeNa Culture Collection. All cells were kept in Roswell Park Memorial Institute (RPMI)-1640 (Thermo Fisher Scientific Company, Waltham, Massachusetts, USA) medium containing 5% fetal bovine serum (FBS), and cultured in an incubator under general conditions.
NC mimic, miR-30a-5p mimic (mimic) were offered by GenePharma (Shanghai, China). oe-CTHRC1 vector, 3 si-CTHRC1 vectors and their negative control lentivirus packing vectors were acquired from Invitrogen (Carlsbad, CA, USA). Vectors were transiently transfected into Calu-3 cells with Lipofectamine 2000 (Thermo Fisher Scientific, Inc.). All cells were cultivated for at least 24 h in the complete medium before transfection, and collected after 36–48 h of transfection.
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9

Cultivating Lung Cancer Cell Lines

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The normal human bronchial epithelial cell line, Beas-2B (Cat#: BNCC338205), and five LAC cell lines, A549 (Cat#: BNCC100215), Calu-3 (Cat#: BNCC338514), H1975 (Cat#: BNCC340345), H460 (Cat#: BNCC339581), and PC9 (Cat#: BNCC340767), were purchased from BeNa Culture Collection (BNCC, China). Dulbecco’s modified Eagle’s minimal essential medium (Gibco, USA) containing 10% fetal bovine serum (FBS) (Gibco, USA) was used to cultivate Beas-2B, Calu-3, and PC9 cells, whereas the Roswell Park Memorial Institute-1640 medium containing 10% FBS (Gibco, USA) was used to cultivate the other cells. All cells were routinely cultured under the same conditions in an incubator containing 5% CO2 at 37°C.
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10

Culturing Human Lung Cancer Cell Lines

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Human LUAD cell lines A-427 (BNCC341432), A549 (BNCC100215), Calu-3 (BNCC338514), PC-9 (BNCC340767) and human bronchial epithelial cell line BEAS −2B (BNCC338205) were all purchased from BeNa Culture Collection (BNCC, Beijing, China). All cell lines were cultured in Dulbecco’s Modified Eagle Medium (DMEM; sigma, USA) containing 10% fetal bovine serum (FBS; Hyclone; GE Healthcare Life Sciences, Logan, UT, USA), 100 μ/mL streptomycin (Gibco; Thermo Fisher Scientific, Inc.) and 100 μ/mL penicillin (Gibco; Thermo Fisher Scientific, Inc.), then nurtured in 5% CO2 at 37 °C. The cells used in this study were all at 2–4 passages after recovery.
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