The largest database of trusted experimental protocols

Avanti mini extruder

Manufactured by Avanti Polar Lipids
Sourced in United States, United Kingdom

The Avanti Mini-Extruder is a device used for the extrusion of lipid vesicles or liposomes. It consists of two gas-tight syringes and a polycarbonate membrane holder. The device allows for the extrusion of lipid samples through the membrane to produce unilamellar vesicles of a desired size.

Automatically generated - may contain errors

151 protocols using avanti mini extruder

1

Hybrid Extracellular Vesicle Preparation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Erythrocytes were trypsinized and centrifuged at 2000 r/min for 5 min. Then, an IKA T18 basic homogenizer was used to remove the nuclei of erythrocytes. Next, the enucleated erythrocytes were collected by differential centrifugation and suspended in 5 mL of deionized water. Subsequently, the collected products were sonicated for 15 min and extruded through 100 nm polycarbonate membranes by an Avanti Mini-Extruder (Avanti Polar Lipids). Then, the obtained EM-vesicles were stored at 4 °C for further use. The CM-vesicles was extracted from MCF-7 cells and prepared using the same protocol. To prepare hybrid CM-EM-vesicles, the EM-vesicles were mixed with CM-vesicles under stirring for 10 min. Next, the mixture was sonicated and extruded through 100 nm polycarbonate membranes using an Avanti Mini-Extruder (Avanti Polar Lipids).
+ Open protocol
+ Expand
2

Oxidation of Cardiolipin Liposomes

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cardiolipin (Avanti Polar Lipids, Inc.) from bovine heart, stored in chloroform, was dried under nitrogen. Then CL was mixed in vortex in phosphate-buffered saline (PBS). After completion of hydration, the milky suspension was transferred to an Avanti® Mini-Extruder (Avanti Polar Lipids, Inc.) and extruded through a series of polycarbonate membranes down to a pore size of 0.1 µm. Liposomes were used immediately after preparation.
Oxidized CL preparation followed procedures described previously [67 (link)] with modification. The milky suspension made above was further sonicated with a bath-type sonicator (Branson 1510, Ultrasonics Corporation, Danbury, CT) for 5 min to make opalescent stable vesicles. The resultant vesicular preparation was flushed for 2 min with 100% oxygen gas, tightly sealed, and kept at 37 °C for 24 h. CL oxidation was measured with Peroxide Assay Kits (cat:23285, Thermo Scientific Pierce, Rockford, IL) according to the manufacturer’s instructions. The oxidized CL vesicles were transferred to an Avanti® Mini-Extruder (Avanti Polar Lipids, Inc.) and extruded through a series of polycarbonate membranes down to a pore size of 0.1 µm. Liposomes were used immediately after preparation.
+ Open protocol
+ Expand
3

Preparation of Liposomes with Varying Lipid Compositions

Check if the same lab product or an alternative is used in the 5 most similar protocols
Liposomes composed of DPPC, Chol, and PEG-DSPE at a molar ratio of 55:40:5 for NTLs and 75:20:5 for TSLs were prepared by the lipid film hydration method, as described previously [25 (link)]. Chol and phospholipids were dissolved in chloroform in a round bottom flask, followed by the evaporation using a rotary evaporator, and the lipid film was dried under a vacuum for 1 h. The lipid film was hydrated with 300 mM citrate buffer (pH 4) with vortex before extrusion. Then, the resulting multilamellar preparation was sized by repeated extrusion through polycarbonate membrane filters (Whatman Inc. Nucleopore, Newton, MA) with a pore size of 100 nm using an Avanti Mini-extruder (Avanti Polar Lipids Inc., Alabaster, AL, USA). The resulting liposomes were passed through a Sephadex G-25 column (PD-10 desalting column, GE Healthcare, Little Chalfont, UK) equilibrated with PBS (pH 7.4) to change the pH of the external phase. The lipid concentration was determined using the phospholipid determination kit.
+ Open protocol
+ Expand
4

Formulation of Liposomal Nanoparticles

Check if the same lab product or an alternative is used in the 5 most similar protocols
Liposomes were formulated according to the Bangham method56 (link) with certain adjustments. A lipid mixture containing DPPC (10 mM), cholesterol (10 mM), GM3 (2 mM), C-Laurdan (1 mM) (M1) or DPPC (10 mM), DOPC (10 mM), GM3 (2 mM), C-Laurdan (1 mM) (M2) in chloroform with mol% as-specified in the text was added to a 25 mL round-bottom flask. The total lipid amount was maintained at 1 μmole. Then, the solvent was removed by rotary evaporation (34 °C, 10 min) to obtain a homogeneous and thin lipid film and the samples were dried overnight under vacuum. Multilamellar vesicles (MLVs) were obtained by adding 1 mL of Milli-Q water to this lipid dry film and then sonicating for 5 min using a probe sonicator (120 Sonic Dismembrator, Fisher Scientific, Waltham, MA). Finally, a dispersion of small unilamellar vesicles (SUVs) was obtained by extruding the obtained MLV dispersion 6 times through a calibrated polycarbonate membrane with a pore diameter of 100 nm using the Avanti® mini extruder (Avanti Polar Lipids Inc).
+ Open protocol
+ Expand
5

Production and Isolation of Cancer Cell-Derived Apoptotic Bodies

Check if the same lab product or an alternative is used in the 5 most similar protocols
The different cancer cell-derived ApoBds were produced by serum starvation, as described previously.43 (link) Briefly, the different cancer cells (human breast cancer cells (SKBR3, MCF-7, and MDA-MB-231), human glioblastoma cells (U87-MG and LN229), human hepatocellular carcinoma cells (HepG2), and mouse 4T1 breast cancer cells were plated to 80% confluence (4 × 106 cells/10 cm plate) for 24 h. They were then washed three times with PBS. We added 8 mL of serum-free DMEM with Pen/Strep for 72 h, and the cell apoptosis process was assessed by fluorescence microscopy and flow cytometry using Hoechst 33342 and FITC-annexin V staining. The cell free culture medium was collected for the isolation of tumor cell-derived ApoBds (ApoBds), as shown in Figure S1 and as mentioned earlier.19 (link) Briefly, the cell-free medium was collected and centrifuged at 300g for 5 min to remove cells and large debris. The supernatant was further centrifuged again at 2000g for 30 min to collect the apoptotic bodies, and the pellet was carefully resuspended in 300 μL of PBS. The isolated ApoBds from different cancer cells were mildly sonicated to break them into small proteolipid vesicles and then reconstructed with or without vancomycin (freeze and thaw) by a physical extrusion process using an Avanti mini extruder (Avanti Polar Lipids Inc.), as mentioned earlier.19 (link)
+ Open protocol
+ Expand
6

Preparation and Characterization of Lipid Vesicles

Check if the same lab product or an alternative is used in the 5 most similar protocols
Multi-layered vesicles (MLVs) were prepared from films of asolectin (Sigma-Aldrich Co., USA) deposited on the bottom of round flasks after solvent (chloroform) evaporation under N2 flow, followed by vacuum drying for at least 3 h. Films were hydrated with buffer (citrate/phosphate pH 5.5 containing 150 mM NaF), at 40°C, to reach a final lipid concentration of 10 mg/mL and vortex mixed. MLVs were submitted to an extrusion process through polycarbonate membranes (Whatman® Nuclepore Track-etch Membrane, Sigma-Aldrich Co., USA) in two steps: first, through 400 nm membranes (6 times), then through two stacked 100 nm membranes, using an Avanti mini-extruder (Avanti Polar Lipids Inc., USA), at 40°C, rendering LUVs. For ATR-FTIR experiments vesicles were prepared in deuterated buffer and left incubating for 2h prior to spectra acquisition.
Peptide samples were prepared by diluting the stock solution (in D2O for IR experiments) with buffer/deuterated buffer, or with buffer containing either 40% 2,2,2-trifluoroethanol (or 2,2,2-trifluoroethanol-d3, TFE), or 8 mM sodium dodecyl sulfate (SDS) or asolectin (AZO) LUVs, at 100 and 250 μg/mL.
+ Open protocol
+ Expand
7

Liposomal Formulations for ICG Delivery

Check if the same lab product or an alternative is used in the 5 most similar protocols
Liposomes composed of DOPC/Chol/DSPE- PEG2000 (95/50/5 molar ratio), DPPC/Chol/DSPE- PEG2000 (95/50/5 molar ratio), and DSPC/Chol/ DSPE-PEG2000 (95/50/5 molar ratio) were prepared by lipid film hydration followed by extrusion. Organic solvents were removed by rotary evaporation (BUCHI Labortechnik AG, Flawil, Switzerland) at 60 °C, then dried lipid film was hydrated with a hydrating medium at 60 °C for 30 min, to achieve a final lipid and ICG concentration of 7.5 mM (5 mM phospholipid and 2.5 mM cholesterol) and 180 µM, respectively. For some initial experiments, ICG concentration ranged between 30 - 180 µM. The different hydrating media used in this work were HEPES-buffered saline (HBS; 20 mM HEPES, 137 mM NaCl, pH 7.4), DW, (NH4)2SO4 (240 mM, pH 5.4) and dextrose solution (DEX; 5% w/v). Hydrated liposome suspension was extruded through polycarbonate membranes (0.8 µm, 7 times; 0.2 µm, 11 times; 0.1 µm, 15 times) at 60 °C using the Avanti® mini-extruder (Avanti Polar Lipids Inc., AL, USA). Extruded liposomes were left to anneal at 65 °C for 30 min, then purified by size-exclusion chromatography with PD-10 desalting columns prepacked with Sephadex™ G-25 resins (GE Healthcare Life Sciences, Buckinghamshire, UK) using HBS buffer.
+ Open protocol
+ Expand
8

Lipid Vesicle Preparation and Characterization

Check if the same lab product or an alternative is used in the 5 most similar protocols
Lipid stock solutions in hexane:2-propanol (3:2, v/v) were mixed in the desired amounts, dried under nitrogen, and redissolved in 140 mM NaCl, 20 mM NaH2PO4, 1 mM DTT, and 1 mM EDTA (pH 7.4). For the lipid transfer assay, the suspension was vortexed and sonicated for 5 min using a Branson 250 titanium probe sonicator (micro tip with a diameter of 3 mm) and then centrifuged for 15 min at 15000 g to remove multilamellar aggregates and titanium probe particles. The POPC acceptor vesicles used in the transfer assay were prepared by sonication. Vesicles for the SPR measurements were made from the dried lipid stock solutions, which were redissolved in 140 mM NaCl, 20 mM NaH2PO4, 1 mM DTT, and 1 mM EDTA pH 7.4 and kept at 60°C to hydrate for at least 30 min prior to filtration. The lipid solution was extruded 15 times through a 100 nm filter using the Avanti mini extruder (Avanti Polar Lipids).
+ Open protocol
+ Expand
9

Preparation and Characterization of LUV

Check if the same lab product or an alternative is used in the 5 most similar protocols
Large unilamellar vesicles (LUV) were prepared by extrusion through 0.1 µm membranes (Avanti mini-extruder, Avanti Polar Lipids, Birmingham, AL). Briefly, liposomes were prepared by mixing PS with phosphatidylcholine (PC) (0.5 mg each) in CHCl3. The lipids were dried under N2, resuspended in 1 mL of HEPES-saline and extruded though the membrane 15 times. For standard curves, we assumed that half the PS localized in the outer leaflet of the LUV. Thus, 1 mg of LUV containing 50% PS would present with 250 µg of PS/mL accessible for binding.
+ Open protocol
+ Expand
10

Preparation of Fluorescent Lipid Bilayer Vesicles

Check if the same lab product or an alternative is used in the 5 most similar protocols
A lipid film composed of 1,2‐dioleoyl‐sn‐glycero‐3‐phosphocholine (DOPC) (Avanti Polar Lipids), 1,2‐dioleoyl‐sn‐glycero‐3‐phosphoethanolamine (DOPE) (Avanti Polar Lipids) and cholesterol (Sigma Aldrich) with a mass ratio of 50:25:25 (total mass 1.25 mg) and 2 mol% additional 1,1′‐Dioctadecyl‐3,3,3′,3′‐Tetramethylindodicarbocyanine Perchlorate (DiD’) (Invitrogen, Thermo Fisher Scientific) was prepared via evaporation from a chloroform solution in a glass vial. After being thoroughly dried by lyophilisation (Labconco), it was rehydrated (1.25 mg/ml) in TE buffer (pH 8.0) containing 10 mM Tris‐HCl (Sigma‐Aldrich), 1 mM EDTA (Sigma‐Aldrich) and 150 mM NaCl (Sigma‐Aldrich) at 37 ˚C for 1 h. After being fully resuspended by vortex, the emulsion was extruded 31 times through a 100 nm polycarbonate membrane (Whatman) at 37 ˚C using an Avanti MiniExtruder (Avanti Polar Lipids). The liposome suspension was stored in a low adsorption glass vial (Supelco, Sigma‐Aldrich) at 4 ˚C protected from light, until use.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!