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Horseradish peroxidase conjugated streptavidin

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Horseradish peroxidase-conjugated streptavidin is a protein complex consisting of streptavidin, a protein derived from the bacterium Streptomyces avidinii, which is conjugated to the enzyme horseradish peroxidase. This complex facilitates the detection and visualization of biotinylated molecules in various biochemical and immunological applications.

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20 protocols using horseradish peroxidase conjugated streptavidin

1

Immunohistochemical Detection of TFE3 in ASPS

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We used the P-16 polyclonal antibody to TFE3 (Santa Cruz# sc-5958; Santa Cruz Biotechnology, Santa Cruz, CA, USA) which binds to the C-terminal portion of the TFE3 protein downstream of the region encoded by exon 6 to help confirm the diagnosis of ASPS (6 (link)). Representative 5-μm FFPE sections from each case were mounted onto positively charged slides, and subsequently processed for immunohistochemical staining using a standard protocol. Briefly, the sections were deparaffinized in xylene, rehydrated using graded ethanol concentrations, and then subjected to antigen retrieval by boiling in citrate buffer at pH 6.0 for 10 minutes. Following quenching with peroxidase and blocking with avidin, sections were incubated overnight with a 1:500 dilution of the polyclonal antibody to TFE3 in phosphate buffered saline (PBS). Detection of antibody binding was achieved using a biotinylated secondary antibody and horseradish peroxidase-conjugated streptavidin (Dako, Carpinteria, CA, USA) and 3,3,5,5′-diaminobenzidine as chromogen.
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2

Immunohistochemical Analysis of TGF-β Signaling

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Immunohistochemistry involved a microwave-based antigen-retrieval technique. After the removal of paraffin, endogenous peroxidase was neutralized with H2O2 (0.3% vol/vol) for 10 min. Sections were placed in phosphate-buffered saline (PBS) for 15 min and protein-blocking solution (Immunotech, Cedex, France) for another 30 min, incubated with primary antibodies overnight at 4°C, then with secondary antibodies for 1 hour at room temperature, and finally horseradish peroxidase–conjugated streptavidin (Dako; diluted 1:500) for visualization. The expression of TSP1, L-TGFβ1, A-TGFβ1, TβRII and p-Smad2/3 was evaluated by use of the JD801 imaging analysis system. The percentage positive staining in the vascular wall was semi-quantified under a microscope.
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3

SIRT1 Expression in Decidualized HESC

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Confluent HESC cultures in 4-well chamber slides were decidualized as described above in the presence or absence of 100 µM resveratrol for 4 or 8 days. Following treatment, cells were fixed with 4% buffered paraformaldehyde, endogenous peroxidase activity blocked with 1% H2O2 and probed with anti-SIRT1 antibody at a 1:100 dilution overnight (Abcam, Cambridge, UK). Excess primary antibody was washed with TBS-T and probed with a secondary anti-rabbit antibody at a 1:300 dilution (DAKO, Glostrup, Denmark). The expression of SIRT1 was detected using horseradish peroxidase-conjugated streptavidin, 1:300 (DAKO) and visualized with SIGMAFAST™ DAB with Metal Enhancer (Sigma-Aldrich), in which Cobalt chloride was added to enhance 3,3′-diaminobenzidine reaction. Eosin was used as a cytoplasmic counterstain. Images were taken using Keyence BZ-X700 microscope with 40×, 100×, or 200× magnifications (Keyence, Osaka, Japan).
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4

OPN-Transglutaminase-2 Binding Assay

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MaxiSorp plates were coated with full-length OPN, the N-terminal part of OPN (Ile1-Arg152) or the C-terminal part of OPN (Ser153-Asn298) (3 µg/ml) in phosphate buffered saline (PBS) overnight at 4°C. Subsequently, the wells were blocked with 2% Tris-Tween buffer (2% Tween 20, 10 mM of Tris-HCl, 1 M of NaCl, 10 mM of CaCl2, pH 7.4) for 1 h at room temperature. A reaction mixture (0.1 ml) containing 10 µM biotinyl-TVQQEL-OH or 5-(Biotinamido)pentylamine, and 0, 0.25, 0.5, 1, 2, 3, 5 µg/ml TG2 in 40 mM of Tris-HCl (pH 8.3), 140 mM NaCl, 10 mM CaCl2, 5 mM dithioerythritol was added to the plates and incubated for 3 h at 37°C. Biotinyl-TVQQEL-OH and 5-(Biotinamido)pentylamine cross-linked to OPN were detected by incubation with horseradish peroxidase-conjugated streptavidin (Dako) (diluted 1∶8000) for 1 h at 37°C. Color development was obtained with TMB-one substrate (Kem-En-Tec) and the reaction was stopped by addition of 0.2 M H2SO4. Color intensity was measured at 450 nm using an ELISA reader.
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5

Quantitative Immunohistochemistry of Nitrotyrosine

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TA muscles were carefully dissected and cut cross sectionally through the widest part of the muscle tissue. One half of the TA was embedded cut side down in OCT before being frozen in a bath of isopentane submerged in liquid nitrogen vapour. After freezing, blocks were brought to −20 °C and 5 μm sections were cut using a Leica Cryostat and then subjected to immunohistochemical staining for nitrotyrosine as described previously [34 (link)]. Briefly, mounted sections of TA muscle were fixed with cold acetone, and endogenous peroxidases were inactivated with 3% H2O2 in Tris-buffered saline. Sections were pre-blocked with a biotin-avidin blocking kit (Vector Laboratories) and then incubated with the nitrotyrosine antibody (Merck Milipore; 1:200) overnight at 4 °C. Subsequent secondary antibody, biotinylated anti-rabbit immunoglobulin 1:100 (Dako) was added for 30 min, followed by horseradish peroxidase–conjugated streptavidin, diluted 1:500 (Dako), and incubated for 30 min in 3,3′-diaminobenzidine tetrahydrochloride (DAB) (Sigma-Aldrich). Images were captured on an Olympus Slide scanner VS120 (Olympus) and viewed in OlyVIA (Olympus, build 13771) and quantitated using a singular threshold setting in Fiji across all samples [35 (link)].
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6

Aortic Inflammation and Atherosclerosis Quantification

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WT and SIRT1 TG mice (8-week-old) were treated with 1 mg/kg Pam3CSK4 for 24 h and then killed. Tissues were fixed through a systemic perfusion, and aortas were dissected carefully and immersed in 10% buffered formalin. Aortic segments were incubated with the anti-rat Mac-1 monoclonal antibody and biotinylated goat anti-mouse IgG, and then reacted with horseradish peroxidase-conjugated streptavidin (Dako). Six to 10 images of each field were captured at various focal lengths using an automatically regulated Z-stepper and Image-Pro4.5J software (Planetron Co., Tokyo, Japan).
Hearts were fixed with 4% paraformaldehyde, dissected, and the proximal half was mounted in OCT compound (Sakura Finetek Inc., Torrance, CA) to prepare the aortic sinus tissue sections. Five-micrometer-thick cross-sections were cut until the aortic sinus appeared. Afterwards, every other section was collected on a slide until the valve cusps were no longer visible. Sections of the aortic sinus were stained with oil red O (Sigma Chemical Co.) to visualize the atherosclerotic lesions. The lesion area was quantified using Carl Zeiss Imaging Systems (AxioVision LE version 4.5, Carl Zeiss Inc., Jena, Germany).
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7

Insulin Signaling Pathway Protein Analysis

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Primary antibodies against Akt2 (#3063), pAkt-Ser473 (#9271), pAkt-Thr308 (#9275), pAMPKα-Thr172 (#2531), pACC-Ser79/212 (#3661), pTBC1D4-Ser588 (mouse: Ser595) (#8730), and pTBC1D4-Thr642 (mouse: Thr649) (#8881) were from Cell Signaling Technology (Danvers, MA, USA) Antibody against pTBC1D1-Ser231 (#NRG-1848963) was from Millipore (Burlington, MA, USA), AMPKα2 antibody (#SC-19131) and Hexokinase II were from Santa Cruz (Dallas, TX, USA)(#SC-6521) while GLUT4 antibody (#PA1-1065) was from Thermo Fisher Scientific (Waltham, MA, USA). ACC protein was detected using horseradish peroxidase-conjugated streptavidin from Dako (Glostrup, Denmark), (#P0397). TBC1D1 and TBC1D4 protein as well as phosphorylation of TBC1D4-Ser711 were detected using antibodies as previously described [31 (link),30 (link)].
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8

Quantifying FAS-Specific IVIG Antibodies

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The binding of native and Fe(II)-IVIG to FAS was determined by a dot blot assay on nitrocellulose membrane (Millipore, Bedford, UK). Recombinant FAS (Enzo Life Sciences AG) in PBS was dotted at 10 μg/mL on nitrocellulose filter membranes. Dots were blocked with PBS containing 0.05% Tween 20 (Sigma-Aldrich) and 5% bovine serum albumin (BSA; Sigma-Aldrich) and incubated with IVIG preparations (20 mg/mL) overnight at 4°C. The membranes were washed with PBS containing 0.05% Tween 20. Quantification of FAS-specific IVIG antibodies was done by incubation with anti-human IgG1 (Biotin-SP-conjugated AffiniPure goat anti-human IgG + IgM, Jackson ImmunoResearch, West Grove PA, USA, 1:20'000 in PBS/T) and subsequent detection with horseradish peroxidase-conjugated streptavidin (DAKO, Glostrup, Denmark, 1:3'000 in PBS/T). Membranes were soaked in enhanced chemiluminescence detection reagent (Millipore; Burlington MA, USA) and visualized using the luminescent image analyzer LI-COR® Odyssey (Lincoln NE, USA).
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9

Immunohistochemical Analysis of Mouse Lung

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Mouse lungs were perfused with 10 mL of saline (through the right ventricle), harvested, and fixed overnight with 4% paraformaldehyde. Fixed samples were embedded in Tissue-Tek® O.C.T. compound (SAKURA Finetek) and serially sectioned (3 μm thickness). The tissues were incubated in 0.3% H2O2/methanol for 30 min to block endogenous peroxidase activity. The sections used for CD31 staining were heat-treated in 0.01 M citrate buffer (pH 6.0) for antigen retrieval before peroxidase blocking. Tissues were blocked with 5% goat serum and incubated with appropriate primary antibodies overnight at 4 °C, followed by secondary antibodies for 60 min at room temperature. The following primary antibodies were used: rabbit anti-mouse BLT2 (5 μg/mL; generated in our laboratory by immunizing a rabbit with a BLT2 C-terminal peptide); rabbit anti-proSP-C (1:1000; Millipore); hamster anti-T1α (1:2000; BioLegend); rabbit anti-CD31 (1:50; abcam), rabbit IgG (5 μg/mL; DAKO); and hamster IgG (1:2000; BioLegend). The secondary antibodies were biotinylated anti-rabbit goat IgG (1:300; DAKO) and biotinylated anti-hamster goat IgG (1:200; Vector Laboratories). Tissues were labeled with horseradish peroxidase-conjugated streptavidin (DAKO), and the signals were detected by incubating with diaminobenzidine. Images were captured under a microscope (Keyence BZ9000).
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10

Caspase-3 Immunohistochemistry in Tumor Sections

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Tumor sections were rehydrated, and endogenous peroxidase activity in the tissue was blocked by treatment with 3% hydrogen peroxide. For epitope retrieval, sections were digested with a mixture of 2.5% hyaluronidase (Sigma, St Louis, MO) and 1 mg/mL pronase in phosphate-buffered saline (pH 7.4; Sigma, St Louis, MO) as previously described.27 (link),28 (link) Sections were subsequently incubated with the primary antibody against caspase-3 (R&D System, Inc, Minneapolis, MN). The samples were incubated with secondary, biotin-labeled antibody (Santa Cruz Biotechnology, Santa Cruz, CA) and then incubated with horseradish peroxidase–conjugated streptavidin (Dako, Carpinteria, CA). The specific immunoreactivity was confirmed with a secondary antibody-only control. The enzyme substrate (3,3′-diaminobenzidine solution containing 0.01% hydrogen peroxide) was then added, resulting in a brown color, and sections were counterstained with hematoxylin (Santa Cruz Biotechnology) and examined by light microscopy.
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