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7 protocols using ultrospec 2100 spectrophotometer

1

Spectrophotometric Absorption Assay Protocol

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Absorption spectra and data from activity assays were recorded with an Ultrospec 2100 spectrophotometer (Biochrom Ltd., Cambridge, England) using cells with a 1 cm path length.
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2

Enzyme Inhibition Activity Assay

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Results from all the inhibition tests described below were reported as a percentage of the blank control. Since the compounds were dissolved in DMSO, in the assays carried out without compounds, DMSO was added to the reaction mixture as blank control. The IC50 values, concentrations of compounds resulting in 50% inhibition of enzymatic activity, were determined by interpolating the dose–response curves. Data from activity experiments were recorded using an Ultrospec 2100 spectrophotometer (Biochrom Ltd., Cambridge, UK).
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3

Phytochemical Analysis of Plant Extracts

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Formic acid (>98% purity), acetonitrile (LC-MS grade), methanol, rutin, quercetin, apigenin and kaempferol were purchased from Merck (Darmstadt, Germany). apigenin 7-O-glucoside, quercetin 3-O-glucoside, kaempferol 3-O-rutinoside and luteolin were purchased from Extrasynthese (Genay Cedex, France). Cynarin, chlorogenic acid, 1,5-dicaffeoylquinic acid, 3,5-dicaffeoylquinic acid, 4,5-dicaffeoylquinic acid, luteolin 7-O-glucuronide, apigenin, 7-O-glucoside, luteolin 7-O-glucoside and diosmetin were purchased from Phytolab (Vestenbergsgreuth, Germany). Bond Elut Jr 500 mg SPE-C18 cartridge was from Agilent (Santa Clara, California, USA). A Milli-Q purification system (Millipore, Bedford, MA, USA) was used to obtain the deionised water (18.2 MΩ cm). All chemicals used for biological assays were obtained as pure commercial products from Sigma Chemical Co (St. Louis, USA) and used without further purification. Spectrophotometric determinations were obtained with an Ultrospec 2100 spectrophotometer (Biochrom Ltd, Cambridge, England) using a 1 cm length path cell.
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4

Enzyme Inhibition Assay Protocol

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The results of all the assays described below were expressed as a percentage of the blank control. Concentrations of extracts resulting in 50% inhibition of enzyme activity (IC50) were determined by interpolation of dose-response curves. The inhibition model was determined by performing assays at different concentrations of substrate and the absence and presence of the extracts at different concentrations. Kinetics data were analyzed using the Lineweaver–Burk plot. Data from the activity assays were recorded with an Ultrospec 2100 spectrophotometer (Biochrom Ltd., Cambridge, UK).
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5

Competence Induction and DNA Transformation

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Transformations were performed as described (Fenton et al., 2016 (link); Fenton et al., 2018 (link); Flores-Kim et al., 2019 (link)). Briefly, cells in early exponential phase were back-diluted to an optical density at 600 nm (OD600) of 0.03 using an Ultrospec 2100 spectrophotometer (Biochrom) and competence was induced with 500 pg/ml competence-stimulating peptide 1 (CSP-1), 0.2% BSA, and 1 mM CaCl2. Cells were transformed with 100 ng chromosomal or plasmid DNA and selected on TSAII overlay plates containing the appropriate additives.
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6

Inhibition of Xanthine Oxidase by W. filifera

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The inhibitory effect of W. filifera extracts on xanthine oxidase activity was determined spectrophotometrically by monitoring the formation of uric acid at 295 nm. XO activity was measured according to the method previously reported.5 (link) The reaction mixture contained 879 μL of 100 mM phosphate buffer pH 7.5, 50 μL of an aqueous solution of XO (0.5 U mL−1) and 10 μL of the extract sample solution or the control sample solution. After mixing, 61 μL of 0.82 mM xanthine solution was added, and the enzyme activity was determined at 295 nm for 3 min at 25 °C. Allopurinol was used as the standard XO inhibitor. The inhibition potency for ChEs and XO was expressed as the IC50 values, which represent the inhibitor concentration need to cause 50% inhibition of enzyme activity. The IC50 values were calculated by interpolation in dose–response curves. The IC50 values displayed represented the mean ± standard deviation for the three independent assays.
Spectrophotometric determinations were made in an Ultrospec 2100 spectrophotometer (Biochrom Ltd, Cambridge, England) using 1 cm path cells and with a FLUOstar OPTIMA microplate reader (BMG Labtech, Offenburg, Germany).
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7

Phytochemical Screening and Bioactivity Assays

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All chemicals were obtained as pure commercial products and used without further purification. Acetylcholinesterase (AChE) from Electrophorus electricus, acetylthiocholine iodide, 2,2′-azinobis-(3-ethylbenzothiazoline-6-sulfonic acid) (ABTS), aluminum nitrate, butyrylcholinesterase (BChE) from equine serum, S-butyrylthiocholine chloride, 3-O-caffeoylquinic acid (chlorogenic acid), catechin, 2,2-diphenyl-1-picrylhydrazyl radical (DPPH), 5,5′-dithiobis(2-nitrobenzoic acid) (DTNB), ellagic acid, Folin-Ciocalteu phenol reagent, ferric chloride, galantamine hydrobromide, gallic acid, 4-hydroxybenzyl alcohol, 6-hydroxy-2,5,7,8-tetramethylchroman-2-carboxylic acid (Trolox), myricetin, 2,4,6-tris(2-pyridyl)-1,3,5-triazine (TPTZ), and quercetin were purchased from Sigma Aldrich (Milan, Italy). LC-MS grade acetonitrile and formic acid were purchased from Merck (Darmstadt, Germany). Standards of myricetin-3-O-glucoside, quercetin-3-O-glucoside, and acacetin were purchased from Extrasynthese (Genay, France). HPLC grade water (18 MΩ·cm) was prepared by using a Millipore (Bedford, MA, USA) Milli-Q purification system.
Spectrophotometric determinations were obtained with an Ultrospec 2100 spectrophotometer (Biochrom Ltd., Cambridge, England) using cells with a 1 cm path length.
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