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4 protocols using rabbit anti histone h4

1

Western Blot Analysis of Protein Expression

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25 or 50 μL of protein extracts was mixed with sample buffer (125 mM Tris–HCl, pH 6.8; 2 % SDS, w/v; 20 % glycerol, w/v; 20 µg/µL bromophenol blue and 5 % β-mercaptoethanol), boiled for 5 min, separated by electrophoresis on a 8 % SDS-PAGE gel and blotted onto a BioTrace™ pure nitrocellulose membrane (Pall Corporation, Pensacola, FL, USA). Membranes were blocked with Tris-buffered saline (TBS) containing 0.1 % Tween-20 and 5 % (w/v) non-fat dry milk at room temperature for 1 h, and incubated with (i) mouse anti-pADPr (170–70 kDa) (3H2844) (sc-71848, Santa Cruz Biotechnology); (ii) goat anti-PARP-1 (113 kDa) (sc-F0908, Santa Cruz Biotechnology); (iii) Rabbit anti-p65 (65 kDa) (sc-372, Santa Cruz Biotechnology); (iv) Mouse anti-iKB-α (35–41 kDa) (sc-1643, Santa Cruz Biotechnology); (v) Mouse anti-β-actin (42 kDa) (Sigma A5316); (vi) Rabbit anti-histone H4 (13–15 kDa) (Abcam 1261) and (vii) mouse anti-α-tubulin (45 kDa) (Sigma T8203). Membranes were washed and incubated with HRP-conjugated secondary antibody in TBS at room temperature. The immune complexes were visualized with an enhanced chemiluminescent substrate, according to the instructions of the manufacturer (Perkin Elmer Life Sciences, Boston, MA), captured by a ChemiScope 3400 (Clinx Sciences Instruments Co, Ltd). Reactive bands were quantified by densitometric analysis with Photoshop software.
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2

Histone H4 Acetylation Analysis in Ovarian Tumors

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Ten μg protein from the BRCA WT (n = 3) and mutant (n = 4) ovarian tumor tissue homogenized in urea buffer (8 M urea, 0.8 M NH4HCO3, pH 8.0) was separated on 4–12% Bis-Tris gels (Thermo Fisher Scientific), followed by electrophoretic transfer to nitrocellulose membranes. Nonspecific binding sites on the blot were blocked with 5% milk/TBS-T, followed by overnight incubation at 4 °C in primary antibody (rabbit anti-Histone H4 acetyl K16, 1:1500, Abcam; rabbit anti-Histone H4 acetyl K12, 1:10 000, Abcam; rabbit anti-Histone H4, 1:1000, Abcam; rabbit anti-actin-HRP, 1:10:000, Sigma). Goat anti-rabbit secondary antibody was used at a 1:10 000 dilution. Immunoreactive bands were visualized using chemiluminescence (SuperSignal West Pico Chemiluminescent Substrate, Thermo Fisher Scientific). Densitometric analysis was conducted using ImageJ (NIH).
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3

Histone Modification Detection by Western Blot

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For SDS-PAGE and western blotting 18% SDS were run at 200 V, constant current. SDS polyacrylamide gels were stained with Coomassie Instant Blue (Expedeon). For western blotting, proteins were transferred onto nitrocellulose membrane (GE Healthcare) by wet transfer at 200 mA for 2 h. Membranes were blocked in 5% milk. Primary antibodies were rabbit anti-phospho-histone H3 threonine 3 (H3T3ph) (Millipore) and rabbit anti-phospho-histone H3 serine 10 (H3S10ph) (Cell Signalling Technologies), which were used at 1 : 1000 dilution, and rabbit anti-histone H4 (Abcam), which was used at 1 : 5000 dilution. The secondary antibody was IRDye 800CW goat anti-rabbit (Licor) which was used at 1 : 10 000 dilution. The membranes were imaged using a Licor Odyssey infrared imaging scanner.
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4

Western Blot Analysis of Cellular Proteins

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For western blot analysis, cells were fixed with 20% trichloroacetic acid (TCA) and disrupted by bead beating. Lysate and precipitate/debris were mixed with 600 µL 10% TCA and pelleted. The pellet was resuspended in 1× Laemmli buffer with 5% β-mercaptoethanol and 160 mM Tris-HCl (pH 7.4), boiled for 10 min and sonicated briefly. The extract was directly subjected to sodium dodecyl sulfate (SDS) gel analysis without clearance. The following antibodies were used: mouse monoclonal anti-Rad53 (clone EL7, in house58 (link), 1:5), mouse monoclonal anti c-MYC (clone 9E10, Santa Cruz Biotechnology Cat# sc-40, RRID:AB_627268, 1:2000), rabbit anti-histone H3 (EpiCypher, Cat# 13-0001, 1:5000), rabbit anti-histone H4 (Abcam Cat# 7311, 1:4000), rabbit anti-histone H3 (acetyl K27) (Abcam, Cat# ab4729, 1:2000), mouse monoclonal anti-acetyl-lysine (T52, in-house59 (link), 1:10), mouse monoclonal anti-Pgk1 (novex, Cat# 459250, 1:10,000), mouse monoclonal anti-Porin (abcam, Cat# 110326, 1:1000), rabbit anti-GFP (Amsbio, Cat# TP401, 1:5000), goat anti-mouse IgG (H + L)-horseradish peroxidase (HRP) Conjugate (Bio-Rad, Cat# 1706516, 1:20,000), goat anti-rabbit IgG (H + L)-HRP Conjugate (Bio-Rad, Cat# 1706515, 1:20,000). Detection was performed by electrochemiluminescence (GE Healthcare). Uncropped western blots are shown in Supplementary Figs. 10 and 11.
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