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2 protocols using mhcii 1 a 1 e pacific blue

1

Immune Cell Isolation and Analysis

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Prior to perfusion, spleens were harvested from experimental mice. Single cell suspensions from spleens were treated with ACK erythrocyte lysis buffer. Mice were perfused with 25 mL of ice-cold PBS and brains and spinal cords were collected from perfused mice and dounce homogenized to obtain single cell suspensions. CNS cells were purified by centrifugation for 30 min in a 30% Percoll (GE Healthcare) solution as previously reported (25 (link)). Cells were incubated with the anti-Fc receptor antibody 2.4G2 prior to the addition of antibodies. The following antibodies were purchased from BD Biosciences: CD45-FITC, CD8α-APC-H7, CD19-APC-H7, CD19-BV510, B220-PE-TxRed, B220–PE-CF594, CD11b-AlexaFluor-700, MHC-v450. The following antibodies were purchased from eBioscience: MHCII-Pacific Blue, CD11c-PECy7. The following antibodies were purchased from BioLegend (San Diego, CA): CD138-PE, MHCII (I-A/I-E)-Pacific Blue, Thy1.1-PerCP, CD4-APC. Cells were acquired on a Gallios flow cytometer (Beckman Coulter) and analyzed with FloJo software (TreeStar) with doublets being excluded.
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2

Immunophenotyping of Lymph Node and Lung Cells

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To determine the composition and activation of immune cells in the lymph nodes from vaccinated mice and lungs from infected mice, single-cell suspension were prepared and stained with fluorochrome-conjugated antibodies before fixing in 4% paraformaldehyde for flow cytometry assay. Single cells from lymph nodes were stained with CD45-PerCP/Cy5.5, B220-Brilliant Violet 421, CD11c-PE/Cy7, CCR7-APC, CD86-PE, and MHC-II (I-A/I-E)-Pacific blue antibodies (all from Biolegend) for the identification the activation of dendritic and B cells. Single cells from lung tissues were stained with CD45-APC/Cy7, B220-PerCP/Cy5.5, CD3-PerCP/Cy5.5, CD4-PE/Cy7, CD8-PE, CD44-APC/Cy7, and CD62L-Brilliant Violet 421 antibodies. Effector memory T cells were identified as CD3+, CD4+/CD8+, CD44+, and CD62L cells, whereas central memory T cells were identified as CD3+, CD4+/CD8+, CD44+, and CD62L+ cells. Stained cells were analyzed on LSRFortessa Cell Analyzer (BD Bioscience), data were analyzed using FlowJo software (TreeStar, Inc.).
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