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Genetica cell line testing

Manufactured by Labcorp
Sourced in United States

Genetica Cell Line Testing is a laboratory product used to verify the identity and integrity of cell lines. It provides a comprehensive analysis of cell line authentication and mycoplasma detection.

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4 protocols using genetica cell line testing

1

Cell Line Validation and Synergy Assay

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All cell lines were incubated at 37°C in a humidified incubator supplied with 5% CO2, maintained in subconfluent culture, and used for ≤ 20 passages. Thirty-two of thirty-four cell lines assayed for synergy in this study were authenticated by short tandem repeat genotyping (Genetica Cell Line Testing, LabCorp). HUVECs are pooled primary cells and have no reference STR profile. One of the cell lines used, KYSE150, was extinguished and not available for authentication. Re-analysis of the cell line screen data using VISAGE without data on KYSE150 cells did not significantly alter any of the results or conclusions of this study. All media was supplemented with 10% fetal bovine serum (FBS) and 2 mM glutamine, and lacked antibiotics unless otherwise specified for the selection of transduced cells. CCD-18co, MDA-MB-231, U-2 OS, A549, BT-20, MDA-MB-415, MDA-MB-157, U-87 MG, CFPAC1, HCT116, MDA-MB-468, T98G, MCF7, SW48, MDA-MB-453, MDA-MB-436, HT55, HT-29, HeLa, HEK293t and CCD-1112sk cells were grown in DMEM medium. C4–2, NCI-H1299, ZR-75–1, KYSE150, HCC38, HCT-15, 22RV1, LNCaP, AU565, CAL33, PC-3, LOVO and COLO205 cells were grown in RPMI-1640 medium. HUVEC cells were grown in EBM medium with EGM™−2 Bulletkit™.
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2

GBM Cell Culture and Treatment

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Human GBM cell lines U87 and U251 (American Type Culture Collection, Manassas, VA, USA) were maintained in MEMα medium (Gibco, Invitrogen, Grand Island, NY, USA) with 10% fetal bovine serum, 100 IU/ml penicillin, and 100 μg/ml streptomycin (Gibco). U87 cells with EGFP-mRFP-LC3 were obtained from Professor Vincent Kam-Wai Wong from Macau University of Science and Technology. Cells were treated with 5 μM lovastatin and/or 500 μM TMZ for 72 hrs in the experiments besides the MTT assay. All cells were cultured in a 5% CO2 humidity incubator at 37°C.
The real-time PCR-based mycoplasma screening test was performed monthly by the Faculty Core Facility of our institution to ensure that the cultured cells were mycoplasma free. Both cell lines were authenticated by short tandem repeat (STR) analysis (performed by Genetica cell line testing, LabCorp, NC, USA).
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3

Characterization of BRAF-mutant Melanoma Cell Lines

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BRAF-mutant melanoma cell lines, WM1341D, WM983B, 1205Lu, WM852, WM793, WM35, WM167 (gifted from Dr. Meenhard Herlyn, The Wistar Institute), A375 (purchased from ATCC), and 1205Lu derivatives, 1205Lu-M1 and 1205Lu-M2 (generated in this study), were maintained in DMEM with 1% penicillin-streptomycin, 1% L-glutamine, and 10% (v/v) FBS. BRAF-wildtype MeWo and NRAS-mutant SKMEL2 cell lines (both purchased from ATCC) were also maintained in the same culture medium as the BRAF-mutant cells. Cells were grown at 37°C under a humidified atmosphere of 5% CO2. Cell lines (WM793, 1205Lu, 1205Lu-M1, and 1205Lu-M2) was authenticated by STR profiling (Genetica Cell Line Testing, LabCorp) and confirmed human origin.
In vivo mouse experiments were performed in compliance with an animal protocol approved by the Institutional Animal Care and Use Committee at the Center for Discovery and Innovation, Hackensack Meridian Health. Animal experiments were carried out with 10-12 weeks old NOD/SCID (NOD.Cg-Prkdcscid/J) mice purchased from The Jackson Laboratory (Bar Harbor, ME) and maintained under standard pathogen free conditions.
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4

STR DNA Analysis of BP50 Cells

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PowerPlex 16 HS short tandem repeat (STR) DNA analysis (Promega Corporation, Madison, WI, USA) for 15 independent genetic sites and amelogenin (the sex identity locus) was carried out on BP50 cells (passage 5 and passage 24) by Genetica Cell Line Testing (LabCorp, Burlington, NC, USA). Screening for mycoplasma, Hepatitis B/C, HIV, and HPV 16/18 was carried out by polymerase chain reaction using the h-IMPACT oncogenic profile (IDEXX Bioanalytics, Columbia, MO, USA).
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