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13 protocols using p β catenin

1

Western Blot Analysis of Cell Signaling

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Cell lysates were obtained in lysis buffer (20 mM Tris-HCl, pH 7.5, 1% NP-40, 5 mM sodium pyrophosphate, 5 mM EDTA, pH 8.0, 1 mM sodium vanadate, 150 mM NaCl, 10 µg/ml aprotinin, 10 µg/ml leupeptin and 1 µM PMSF). After quantification and denaturation, equal proteins of each sample were subjected to 10% SDS-PAGE and transferred to a polyvinylidene fluoride (PVDF) membrane (Bio-Rad). The membrane was first blocked with 5% non-fat dry milk for 1 h at room temperature, and then incubated with specific primary antibodies overnight at 4°C, such as antibodies against SFRP2, Cyclin D1, Cyclin E1, CDK4, CDK6, p27, Vimentin, E-cadherin, β-catenin, P-β-catenin and β-actin (Abcam, Cambridge, MA, USA, 1:1,000). Next, the membrane was washed and incubated with the secondary antibodies against rabbit or mouse for 1 h at room temperature. Lastly, the membrane was exposed to enhanced electrochemiluminescence (ECL) following the detection kit (KeyGen Biotechnology, Nanjing, Jiangsu, China) and photographed by the ChemiDoc XRS gel documentation system (Bio-Rad). All the experiments were repeated at least three times.
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2

Western Blot Analysis of Cardiac Proteins

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Heart tissues or cardiomyocytes were homogenized with radioimmunoprecipitation assay buffer containing phenylmethylsulfonyl fluoride and a phosphatase inhibitor for 30 min. After the samples were centrifuged at 12,000×g for 30 min, the supernatants were collected for analysis of the protein concentrations [66 ]. The protein samples were then subjected to 10% or 12% sodium dodecyl sulfate polyacrylamide gel electrophoresis and transferred onto a polyvinylidene difluoride membrane (IPVH00010; Millipore, Billerica, MA, USA). The proteins on the membrane were immunolabeled with primary antibodies at 4 °C overnight, and then were incubated with the corresponding secondary antibodies for two hours at room temperature. The signals were detected with a chemiluminescence imaging system (Bio-Rad, Hercules, CA, USA). The following primary antibodies from Abcam were used at a 1:1000 dilution: β-catenin (#ab184919), p-β-catenin (#ab75777), FUNDC1 (#ab224722), Atg5 (#ab108327), Beclin1 (#ab207612), p62 (#ab91526) and LC3II (#ab192890).
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3

Western Blot Analysis of Protein Expressions

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Total protein was extracted by using a radioimmunoprecipitation assay (RIPA) kit (Beyotime, Nanjing, China) with protease inhibitors. Protein samples were loaded in 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE), followed by transferring onto polyvinylidene difluoride (PVDF) membranes. Then the samples were blocked with 5% bovine serum albumin (BSA) for 3 h, and incubated in the primary antibody overnight at 4 °C. Following washing with Tris-buffered Saline with Tween (TBST) and incubating in the corresponding secondary antibody, the membranes were detected by the enhanced chemiluminescence (ECL) kit (Millipore, USA). Antibodies involved in the study were diluted as follows: GAPDH, β-catenin, GSK-3β, and Cyclin D1 (1:1000; Cell Signaling, USA); sCLU (1:500; Santa Cruz, USA); AKT, p-AKT, p-β-catenin, p-GSK-3β, MMP-2, MMP-9, CD133, CD44, CD90, CD24, and EpCAM (1:1000; Abcam, USA); IgG horseradish peroxidase conjugate (1:1000; Univ-bio, Nanjing, China).
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4

Protein Expression Analysis in SH-SY5Y Cells

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SH-SY5Y cells were lysed using RIPA lysis buffer (cat. no. P0013B, Beyotime Institute of Biotechnology) supplemented with containing protease inhibitors (cat. no. ST507-10mL, Beyotime Institute of Biotechnology) and phosphatase inhibitors (cat. no. ST019-10mM, Beyotime Institute of Biotechnology). The protein samples were prepared, resolved using 12.5% SDS gels by SDS-PAGE, and transferred to PVDF membranes (cat. no. IPVH00010; MilliporeSigma). The membranes were blocked using 5% skimmed milk for 2 h at room temperature and incubated with antibodies against β-catenin, p-β-catenin (1:800; Abcam), TREM1 (1:2,000; Abcam), TREM2 (1:1,000; Abcam), CyclinD1 (1:1,000; Abcam), nesfatin-1 (1:5,000; Technology), GSK3β, p-GSK3β (Ser9) (1:1,000; Cell Signaling Technology, Inc.), Copine-6 (1:1,000; Santa Cruz Biotechnology, Inc.), BDNF (1:1,000; Abcam), or β-actin (1:1,000; OriGene Technologies, Inc.) overnight at 4˚C and then incubated with a horseradish peroxidase-conjugated secondary antibody (1:5,000; OriGene Technologies, Inc.) at 37˚C for 2 h. Densitometry analysis was performed using ImageJ 1.53 (National Institute of Health).
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5

Western Blot Analysis of Protein Expression

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Cells were harvested and lysed in RIPA lysis buffer (Thermo Fisher Scientific, USA) for extracting total proteins. The protein concentrations were measured by a BCA protein assay kit (Transgen Biotech, China), separated by 12% sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) and transferred to nitrocellulose (NC) membranes. The membranes were then blocked by 10% nonfat milk and incubated with the corresponding antibody (CKIP-1, Akt, p-Akt, Gsk3β, β-catenin, p-β-catenin, Smurf1, and GAPDH; Abcam, Cambridge, MA, USA) diluted according to the instructions for 12 h at 4°C. After washing 3 times with PBS/0.1% Tween-20, membranes were incubated at room temperature for 2 h with horseradish peroxidase-conjugated secondary antibody (anti-mouse IgG and anti-rabbit IgG at 1:10000 dilution; Abcam). Protein expression levels were detected with ECL detection solution (Millipore, USA) and visualized with chemiluminescence detection system. The bands signal were analyzed using a gel imaging system (Bio-Rad).
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6

Immunofluorescence Analysis of Cellular Signaling

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Cells were grown on glass coverslips until adhesion, fixed with 4 % formaldehyde in PBS for 10 min, and permeabilized with 0.2% Triton X-100/PBS at room temperature. As for paraffin-embedded specimens (4μm), the sections were rehydrated by xylene, subjected to antigen retrieval by irradiating in target retrieval solution (TRS, DAKO, USA) with microwave oven. The sections were blocked by 5% bovine serum albumin (Sigma, USA) and then incubated overnight at 4°C with LC-3B, p38, p-p38, β-catenin and p-β-catenin (Abcam, Cambridge, UK). They were then washed with PBS and incubated with Alexa Fluor 488 IgG (Invitrogen, USA). Nuclei were stained with 1 μg/mL DAPI (Sigma, USA) in the dark. Finally, coverslips were mounted with SlowFade® Gold antifade reagent (invitrogen, USA) and visualized in a laser confocal scanning microscope (Leica, Germany).
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7

Molecular Mechanisms of VEGFR-2 Regulation

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The following chemicals were used: ADAM10 inhibitor (GI254023X; #SML0789, Sigma-Aldrich, Taufkirchen, Germany); ADAM10/17 inhibitor (GW280264X; #AOB3632, Aobious Inc., Hopkinton, MA, USA); human VEGF-A (#V4512, Sigma-Aldrich); TNFα (#H8916, Sigma-Aldrich); protease activator APMA (P-aminophenylmercuric acetate; #A9563, Sigma-Aldrich); γ-secretase inhibitor (flurbiprofen [(R)-251,543.40–9]; #BG0610, BioTrend, Cologne, Germany).
For Western blotting, primary antibodies reactive with the following antigens were used: P-β-catenin (Tyr142; diluted 1:500; #ab27798, abcam, Cambridge, UK); P-VEGF-R2 (Tyr1214; 1:1000, #AF1766, R&D Systems, Wiesbaden, Germany); VE-cadherin (BV9; 1:500; #sc-52,751, Santa Cruz Biotechnology, Heidelberg, Germany); VE-cadherin (1:1000; #2158S); ADAM10 (1:500–1:1000; #14194S); ADAM17 (1:1000; #3976S), β-catenin (1:1000; #9587S); VEGF-R2 (1:1000; #9698S); P-VEGF-R2 (Tyr1175; 1:1000; #2478S, all from Cell Signaling Technology, Frankfurt, Germany); and β-actin-POD (1:25,000; #A3854, Sigma-Aldrich). HRP-conjugated secondary antibodies were from Cell Signaling Technology.
For immunofluorescence microscopy, the following antibodies were used: anti-VE-cadherin (1:50; #2158S); anti-mouse IgG (H + L), Alexa Fluor 555 conjugate (1:1500; #4409); and anti-rabbit IgG (H + L), Alexa Fluor 488 conjugate (1:1500; #4412) (all from Cell Signaling Technology).
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8

Protein Expression in Prostate Cancer Cells

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The total protein was extracted from human PCa cells following the instructions of the total protein extraction kit (bl521a; Biosharp, Shandong, China); subsequently, the protein concentration was detected using the diquinoline formic acid method. The denatured protein samples were separated by electrophoresis according to which membrane was transferred using the semi-dry method. After sealing the membrane with skimmed milk powder for 2 h, we added β-actin (gb12001; Servicebio, Wuhan, China), Wnt3a (2721; Cell Signaling Technology, Danvers, MA, USA), GSK3 β (ab2602; Abcam, UK), phosphorylated (p)-GSK3 β Ser9 (ab131097; Abcam, UK), β-catenin (ab32572; Abcam, UK), p- β-catenin (ab27798; Abcam, UK), C-myc (ab32072; Abcam, UK), Cyclin D1 (2978; Cell Signaling Technology, USA), vimentin (3195; Cell Signaling Technology, USA), E-cadherin (60330-I-Ig, Proteintech, USA), and GPX2 (ab140130; Abcam, UK) antibodies. Subsequently, the membrane was incubated overnight at 4 °C, then incubated with primary and secondary antibodies at room temperature for 2 h, exposed, and developed using the ECL film. The protein expression was analyzed, and the experiment was repeated three times.
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9

Western Blot Analysis of Protein Markers

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Equal samples of 30 μg of extracted protein were separated by sodium dodecyl sulfonate-polyacrylamide gel electrophoresis (SDS-PAGE), and then transferred onto a polyvinylidene fluoride (PVDF) membrane. The membrane was firstly blocked into skim milk for 4 h, then incubated with primary antibody at 4 °C overnight. Following 2 h of incubation with secondary antibody, the chemiluminescence intensity of the membrane was evaluated using a Clarity™ Western ECL Substrate Kit (Bio-Rad, Shanghai, China). The cyclin D1 (1 : 1000), c-Myc (1 : 1000), B-cell lymphoma 2 (Bcl-2, 1 : 1000), Bcl2-associated X (Bax, 1 : 1000), GAPDH (1 : 10 000), MTDH (1 : 1000), AKT (1 : 500), p-AKT (1 : 500), β-catenin (1 : 5000), and p-β-catenin (1 : 500) rabbit primary antibodies and goat anti-rabbit secondary antibodies (1 : 10 000) were purchased from Abcam (Cambridge, MA, USA).
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10

Western Blot Analysis of Signaling Proteins

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Total cell lysates were prepared with a detergent lysis buffer. Western blots were performed as instructions. In short, cellular proteins were separated by 10% SDS-PAGE, transferred to polyvinylidene difluoride membranes, and were probed with antibodies against GSK3β (1:2000, Abcam), β-Catenin, p-β-Catenin (1:2000, Abcam), C-Myc (1:2000, Sigma) and Vimentin (1:1000, CST). Horseradish peroxidase (HRP)-conjugated anti-rabbit or anti-mouse antibody (1:1000, Abcam) were used as a secondary antibody. GAPDH protein levels were determined by using the specific antibody (1:5000, Abcam) as a loading control for cells, ECL reagent (Tanon, China) was used to visualize the protein bands.
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