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3 protocols using impdh2

1

Immunoprecipitation and Immunoblotting Assays

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Immunoprecipitation was performed using the following antibodies: IMPDH2 (Abcam, ab129165), RAC1 (Santa Cruz Biotechnology, sc-514583), Pierce™ Anti-c-Myc Magnetic Beads (Thermo Fisher Scientific, 88842). Immunoblotting was performed with the following antibodies: RAC1 (Proteintech, 24072-1-AP 1:500), GMPS (Abcam, ab228716 1:1000), IMPDH2 (Proteintech, 67663-1 1:500), Tubulin (Proteintech, HRP-66031 1:1000), GMPR (Proteintech, 15683-1-AP 1:1000), NME1 (Proteintech, 11086-2-AP 1:1000), ITGB1 (Proteintech, 26918-1-AP 1:1000), KLF9 ((Santa Cruz Biotechnology, sc-376422 1:250), RHOA (Cell Signaling, #2117, 1:500), CDC42 (Cell Signaling, #8747, 1:200), and RAS (Cell Signaling, #8832, 1:500).
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2

Bladder Cancer Protein Expression Analysis

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RIPA (Beyotime#P0013B) supplemented with phosphatase inhibitor II (ZHHC#PL026) and PMSF (ZHHC#PL012) were used to lyse bladder cancer cells. Protein concentration was determined by BCA (Yamei#ZJ101L) and then separated into 10% SDS-PAGE gels with antibodies for bound protein and ECL blotting system (GLPbio#GK10008) to detect the bands. Primary antibodies were used in the experiments included: β-actin (1:2000; Proteintech#81115-1-RR); GAPDH (1:2000; Proteintech#10494-1-AP); IMPDH1 (1:3000; Proteintech#22092-1-AP); IMPDH2 (1:4000; Abcam#ab131158); TWIST1 (1:70; Santa cruz#sc-81417/ 1:1000; Proteintech#25465-1-AP); NFIL3 (1:150; Santa cruz#sc-74415); IKZF1 (1:150; Santa cruz#sc-398265); TEAD2 (1:150; Santa cruz#sc-81397); GLI2 (1:150; Santa cruz#sc-271786); PRRX1 (1:150; Santa cruz#sc-293386); FLI1 (1:150; Santa cruz#sc-365294); MMP9 (1:150; Santa cruz#sc-13520); PCNA (1:200; Santa cruz#sc-56); MMP2 (1:150; Santa cruz#sc-13595); EMMPRIN (1:150; Santa cruz#sc-21746).
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3

Comprehensive Protein Analysis Protocol

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Cells were lysed in buffer containing 20 mM Tris pH 7.5, 140 mM NaCl, 1 mM EDTA, 10% glycerol, 1% Triton X-100, 1 mM DTT, 50 mM NaF, protease inhibitor cocktail (Sigma #P8340) and phosphatase inhibitor cocktail #2 (Sigma #P5726) and #3 (Sigma #P0044) used at 1:100. Western blots were performed using the following antibodies at 1:1000 dilution unless otherwise indicated: phospho-p70 S6 Kinase T389 (CST #9234), p70 S6 Kinase (CST #2708), 4E-BP1 (CST #9644), TSC2 (CST #4308 and #3612), GAPDH (CST #5174), IMPDH1 (Abcam #ab137120), IMPDH2 (Abcam #ab131158), Cleaved Caspase-3 D175 (CST #9664), PARP (CST #9542), phospho-AMPKα T172 (CST #2535), AMPKα (CST #2532), phospho-Raptor S792 (CST #2083), Raptor (CST #2280), ADK (Santa Cruz #sc-514588, 1:500), phospho-Chk1 S345 (CST #2348), Chk1 (CST #2360), RPA32/RPA2 (Abcam #ab76420, 1:10000), phospho-Histone H2A.X S139 (CST #9718), Histone H2A.X (CST #7631), and UBF (Santa Cruz #sc9131).
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