The largest database of trusted experimental protocols

6520 qtof lcms system

Manufactured by Agilent Technologies

The 6520 QTOF LCMS system is a high-performance liquid chromatography-mass spectrometry (LC-MS) instrument designed for accurate mass and high-resolution analysis. It features a quadrupole time-of-flight (QTOF) mass analyzer, which provides precise mass measurements and comprehensive data acquisition capabilities.

Automatically generated - may contain errors

2 protocols using 6520 qtof lcms system

1

Analytical Characterization of Hit Compounds

Check if the same lab product or an alternative is used in the 5 most similar protocols
Non deuterated DMSO solutions of validated hits were analyzed by HPLC(UV)-MS and NMR in order to determine the purity of the compounds.
High-performance liquid chromatography coupled to mass spectrometry (HPLC−MS) was performed with an Agilent 6520 QTOF LCMS system connected to an Agilent 1290 LC, equipped with a Zorbax Eclipse Plus C18 column (50 mm ×2.1 mm, particle size 1.8 μm). At a flow rate of 0.8 ml/min a stepwise gradient of Water (+ 0.01% HCOOH) (Eluent A) to Acetonitrile (+ 0.01% HCOOH) (Eluent B) was employed as follows: 0 min 5% B; 0.3 min 5% B; 4.5 min 99% B; 5 min 99% B; 5.1 min 5% B. Mass spectra were acquired in both ESI+ and ESI− mode, scanning from m/z 100 to 3200 Da and UV detection was done at 215 (or 220) and 265 (or 255) nm.
NMR Spectra were recorded on a Bruker Avance III 600 MHz spectrometer, equipped with a 5mm TCI Probe, at 25°C. Samples were diluted with DMSO-d6 to an end volume of 160 μl to be measured in 3mm NMR tubes. Double pre-saturation on the water and DMSO resonance frequency as well as 13C decoupling were employed in a gradient 1H-NMR experiment.
The purity level of the compounds was >95% as determined by both methods.
The syntheses of fragments 1 and 4 were described.[49 , 50 (link)] The syntheses of fragments 2 and 3 have not been disclosed to the public.
+ Open protocol
+ Expand
2

Peptide Purity and Mass Determination

Check if the same lab product or an alternative is used in the 5 most similar protocols
To determine the purity and the mass of the peptides, LC–MS
data were acquired on an Agilent 6520 Q-TOF LC–MS system. Lyophilized
peptides were suspended in 0.1% formic acid in water to obtain a final
concentration of 1 mg/mL. Five microliter of the sample was loaded
on an Agilent Technologies 43 mm C18 Chip column. Agilent Technologies
1200 Series Quaternary high-performance liquid chromatograph was used.
LC gradient: initial conditions 3% B (A: 0.1% formic acid in water;
B: 99.9% acetonitrile, 0.1% formic acid), gradient to 80% B over 9
min, hold at 80% B for 3 min, ramp back to (0.5 min) and hold at (2.5
min) initial conditions. An Agilent Technologies 6520A Accurate Mass
Q-TOF MS with integrated Chip Cube source was used to collect data.
Data across a total of 15 min of elution were collected. MS data were
collected between 295 and 2500 m/z, and MS/MS data were collected between 70 and 2500 m/z at 2 spectra/s. Peptides with counts >2000
were picked for MS/MS.
LC–MS for the fibrils was obtained
using an LTQ Orbitrap XL mass spectrometer. Samples were precipitated
using ice-cold acetone. The pellet was recovered by centrifugation
(16 000g) and washed twice with 80% acetone
(in water). The pellet was dried and resuspended in 100 μL of
urea buffer (6 M urea, 2 M thiourea, 0.1 M ammonium bicarbonate).
No particulates were observed, suggesting fibrils were completely
dissolved in the buffer.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!