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Nis elements advanced research microscope imaging software

Manufactured by Nikon
Sourced in Japan

NIS Elements Advanced Research Microscope Imaging Software is a comprehensive software suite designed to support advanced microscopy applications. It provides a range of tools and functions to capture, analyze, and manage high-quality microscopic images.

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4 protocols using nis elements advanced research microscope imaging software

1

2-AG-Induced CB2R Membrane Trafficking

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SEP-CB2R HEK293 cells were exposed to 10 µM 2-AG for 5, 15, and 30 min. At the end of treatment, ice-cold phosphate-buffered saline (PBS; Thermo Fisher Scientific) was added to cells and quickly replaced with 4% paraformaldehyde (PFA; Electron Microscopy Sciences, Hatfield, PA) in PBS. Cells were incubated in PFA for 15 min at room temperature and then washed twice with PBS before confocal fluorescence microscopy analysis using a Nikon A1R Eclipse Ti-E inverted microscope with a N Apo 60× oil immersion objective (Nikon, Melville, NY). The NIS Elements Advanced Research Microscope Imaging Software (Nikon) was used for image acquisition. Fluorescence intensity analysis from the equatorial plane was carried out using the Fiji imaging processing software (ImageJ, University of Wisconsin–Madison, Madison, WI).
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2

Visualizing EGFR Trafficking Dynamics

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For microscopical evaluation of EGFR trafficking, we used A549 EGFR biosensor cells with an SH2 domain of the adaptor protein Grb2 fused to GFP. Upon stimulation with EGF, EGFR is internalized by endocytosis forming fluorescent granules. A549 biosensor cells were seeded in ibidi 8-well µ-slides (10,000 cells/well) and exposed to AcoA or control compounds. After 1 h, EGF (100 ng/ml) was added. Cell nuclei were counterstained with DAPI-containing mounting medium (Vectashield, Vector Laboratories, La Jolla, CA) and cells were viewed under a Nikon TS Ti-E fluorescence microscope using NIS Elements Advanced Research Microscope Imaging Software (Nikon Corporation, Tokyo, Japan) for imaging and image processing. The number of granules was normalized to the number of DAPI-stained nuclei in the respective area.
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3

Brightfield and Confocal Microscopy of Dunaliella

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The Eclipse Ti-U inverted research microscope (Nikon, Tokyo, Japan) with a Nikon Digital Sight DS-Fi1 camera system was used to take brightfield microscopy photographs of cells of each Dunaliella strain. The objective lens used was Nikon Splan Fluor ELWD 60×/0.7 and the ocular lens was Nikon CFI 10×/22. The NIS-Elements Advanced Research Microscope Imaging Software (Nikon, Tokyo, Japan) was used to acquire the photos. Differential interference contrast (DIC) microscopy photographs were also obtained using a confocal microscope system ZEISS LSM 880 (Carl Zeiss Microscopy GmbH, Jena, Germany). The ZEISS Plan Apochromat 63×/1.4 oil DIC objective lens and the Carl Zeiss PI 10×/23 ocular lens were used. Images were acquired and analyzed through the ZEN 2.1 LSM software (Carl Zeiss Microscopy GmbH).
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4

PMMA Particle Wettability Analysis

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An oxygen plasma cleaner (Harrick plasma cleaner PDC-32G) was used to oxidize the surface and change the wettability of 1.5 mm PMMA particles. Cleaned particles were treated with oxygen plasma for 5 minutes to increase the surface hydrophilicity. The changed wettability of the particles was manifested as a change in the fraction of the particle immersed when placed on the subphase.
To measure the immersed depth of a PMMA particle, it was gently placed at the water/vapor interface in a square glass cuvette (2 cm × 2 cm). A solid state camera (Cohu, model #4115-5000-0000) with a zoom objective (Bausch and Lomb Monozoom 7) was focused at the three-phase contact line around the particle periphery, with illumination from behind the cuvette. Captured images were analyzed (Nikon NIS-Elements Advanced Research microscope imaging software) to determine the immersed depth of particle, the distance from the interface where liquid meets the particle to the bottom of the particle. The immersed depths, of untreated 0.5 mm, 1.5 mm and 3.2 mm particles in water were 0.32 ± 0.02 mm, 0.86 ± 0.04 mm and 1.8 ± 0.1 mm, respectively. The immersed depth of the plasma treated 1.5 mm particle in water was 1.4 ± 0.1 mm.
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