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6 protocols using sc 13132

1

Protein Extraction and Western Blotting

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Cell and tissue lysis was performed with RIPA buffer (P0013E, Beyotime) to for protein extraction. Protein concentrations were measured utilizing a BCA protein assay kit (Solarbio, Beijing, China). The Western blot procedure was executed based on a previously described method [41 (link)]. Primary antibodies, such as HSPB1 (1:1000, sc-13132), COX2 (1:500, sc-376861), and β-actin (1:1000, sc-47778), were acquired from Santa Cruz Biotechnology (Santa Cruz, CA). TSG101 (1:2000, ab125011), CD63 (1:2000, ab217345), CD9 (1:2000, ab307085), calnexin (1:2000, ab10286), and TFRC (1:2000, ab214039) were obtained from Abcam (Abcam, Cambridge, MA, USA).
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2

PPP1CC2 Antibody Validation Protocol

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The anti-PPP1CC2 antibody was raised in rabbit against the specific PPP1CC2 C-terminal peptide (VGSGLNPSIQKASNYRNNTVLY) and has been described previously [60 (link)]. Antibody against normal rabbit IgG (sc-2027), used as negative control for immunoprecipitation and against HSF1 (sc-177757), GADD34 (sc-373815), p-HSP27 (Ser 82) (sc-166693), and HSP27 (sc-13132), used for Western blot analysis, was obtained from Santa Cruz Biotechnology (Dallas, Texas, USA). Antibodies against eIF2α (9722S) and p-eIF2α (Ser 51) (119A11) were obtained from Cell Signaling Technology Europe Inc (Leiden, The Netherlands). The anti-HSP90 (13171-1-AP) and anti-HSP60 (15282-1-AP) were obtained from Proteintech (Manchester, United Kingdom). The infrared IRDye®680RD anti-rabbit (926-68071) and IRDye®800CW anti-mouse (926-32210) secondary antibodies were obtained from LI-COR Biosciences (Lincoln, Nebraska, USA).
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3

Immunoblotting for Stress Response

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Primary antibodies against beta-actin (SC-47778), HSP70 (SC-660488), and HSP27 (SC-13132), as well as secondary antibodies (m-IgGk BP-HRP; SC-516102), were purchased from Santa Cruz Biotechnology. The chemicals and necessary kits used were obtained from the sites of their appropriate representatives and included SDS–PAGE sample buffer (Bio-Rad, Berkeley, CA, USA), 4–12% Bis-Tris protein gels (Bio-RAD), Coomassie protein stain (Expedeon, Swavesey, UK), a ProPac SCX-10 analytical column (Thermo Fisher Scientific, US), a TSKgel G3000SWxL size exclusion column (Tosoh Bioscience GmbH, Germany), an RNeasy Mini Kit (Qiagen, Germany), and a Protease Inhibitor Cocktail-P2714 (Sigma–Aldrich).
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4

Western Blot Analysis of Muscle Proteins

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Muscle proteins were extracted from homogenizing LT muscles (about 0.12 g) in radio immunoprecipitation assay buffer (1.2 mL) at 45 min and 24 h post-mortem. Proteins were quantified and normalized using Coomassie staining. Muscle proteins (5 μL) were separated through 12% SDS-PAGE gel using a Mini-PROTEAN system (Bio-Rad Laboratories Inc., Richmond, CA, USA) and then transferred to polyvinylidene difluoride membranes (GE Healthcare Ltd., Freiburg, Germany). Transferred membranes were blocked with 5% non-fat dry milk powder in Tris-buffered saline/Tween. For Western blot analysis, the following primary antibodies were used: αβ-crystallin (1:10,000 dilution; ab13496, Abcam Ltd., Cambridge, UK), HSP20 (1:1000 dilution; ab13491, Abcam Ltd.), and HSP27 (1:3000 dilution; sc-13132, Santa Cruz Biotechnology Inc., Santa Cruz, CA, USA). HSP27 antibody detects 27 kDa (intact form) and 22 kDa (degraded form) proteins. The secondary antibody used was anti-mouse immunoglobulin G (IgG) horseradish-peroxidase-linked antibody (1:3000 dilution; Cell Signaling Technology Inc., Danvers, MA, USA). A WesternBright ECL Kit (Advansta Inc., Menlo Park, CA, USA) was used to detect proteins and images were taken using the ImageQuant LAS 500 (GE Healthcare Ltd., Freiburg, Germany). Each protein band was analyzed using one-dimensional image analysis software (Eastman Kodak Co., Rochester, NY, USA).
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5

Immunoblotting Protein Expression Analysis

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Protein concentration was determined using a BCA kit (Thermo Scientific). The SPEs sample proteins were separated by 10% SDS-PAGE and transferred onto PVDF membranes. Proteins were then subjected to immunoblot. All primary and secondary antibodies were diluted in PBS. Primary antibody incubation was performed at 4°C overnight, and secondary antibody incubation was performed at room temperature for 2 h. The immunoreactive blots were visualized using an enhanced chemiluminescence reagent. Antibodies against CAPNS1 (rabbit monoclonal, 1/2000, ab92333), TLN1 (rabbit polyclonal, 1/400, ab71333) was purchased from Abcam (Cambridge, Cambs, UK). Antibodies against SRC (rabbit polyclonal, 1/1000, CST2108), ALDOA (rabbit polyclonal, 1/1000, 3188S) and ITGB2 (rabbit polyclonal, 1/1000, CST4702) were purchased from Cell Signaling Technology. Cd63 (rabbit polyclonal, 1/200, sc-15363), Annexin1 (mouse monoclonal, 1/200, sc-7964), HSP27 (mouse monoclonal, 1/5000, sc-13132) were purchased from Santa Cruz Biotechnology. We used Coomassie Brilliant Blue staining as a loading control. Densitometric analysis was performed on the Western blot images using ImageJ software (nih.gov).
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6

Protein Expression and Quantification

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Sodium dodecylsulphate (SDS), bovine serum albumin (BSA), IOX2, 17-AAG, cobalt chloride and (3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) (all Sigma-Aldrich), 3-[(3-cholamidopropyl) dimethylammonio]-1-propanesulfonate hydrate (CHAPS) (ApliChem), bortezomib (Santa Cruz Biotechnology), HALT TM protease inhibitor cocktail (ThermoFisher Scientific), prestained protein standards (BioRad, cat. no. 1610373) . Mouse monoclonal antibodies against Hsp27 (SC-13132), Hsp70 (SC-66048), Hsp90 (SC-13119), caspase 3 (SC-271028), HIF1α (SC-71247) and β-actin (SC-47778) (all Santa Cruz Biotechnology). Goat anti-mouse (A0168) (all Sigma-Aldrich) secondary antibodies conjugated with horse radish peroxidase.
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