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79 protocols using mannan

1

Mannan Stimulation of SBD-1 Expression

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After reaching 80–90% confluence, the OREC were passaged into 6-well flat-bottom culture plates containing DMEM/F12 medium, without FBS or antibiotics, and were incubated at 37 °C with 5% CO2 for a 24-h starvation treatment. Following this treatment, the OREC were then randomly divided into six groups: five mannan-stimulated groups and one control group. The stimulated groups were exposed to dose titration (10, 50, 100, 200, and 400 μg/mL) of mannan (Sigma, Munich, Germany), while the control group was cultured with DMEM/F12 medium instead of mannan at 37 °C, 5% CO2 for 8 h. Then, the total RNA of each sample was extracted, the cell culture supernatant was collected, and the expression levels of SBD-1 mRNA and protein were detected by qPCR and ELISA, respectively, to determine the optimal concentration of mannan-induced SBD-1 expression.
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2

Monoclonal Antibody Cocktail Arthritis Induction

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Cocktails of the monoclonal antibodies including Cab3, anti-CII antibody cocktail (positive control), and isotype antibody cocktail (negative control) were prepared by mixing equal amounts of each sterile filtered antibody solution to achieve a final concentration of 2 or 4 mg. Mice were injected intravenously (i.v.) with the antibody cocktail (Cab3) composed of M2139, L10D9, and 15A11. For the induction of lpsCAIA (Cab-induced and LPS-enhanced arthritis), the mice received (50 μg/mouse) lipopolysaccharide from Escherichia coli O55: B5 (Sigma-Aldrich) intraperitoneally (i.p.) on day 5. For the induction of mCAIA (Cab-induced mannan-enhanced arthritis), the mice received (5 mg/mouse) mannan (Sigma-Aldrich) from Saccharomyces cerevisiae i.p. on days 5 and 60. Signs of arthritis in the paws were followed up macroscopically with blind scoring of each red and swollen joint following a previously described protocol [35 ]. Briefly, macroscopic (clinical) arthritis was defined based on the two following criteria, swelling and redness, and was scored as follows: 1 point was for each inflamed toe or knuckle, whereas 1–5 points were given to an inflamed wrist or ankle according to the severity of disease, resulting in a score of 0 to 15 for each paw and 0 to 60 points for each mouse. Importantly, paws which were still swollen but without erythema were not scored or defined as arthritis.
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3

Epithelial Cell Culture and Inhibitor Treatments

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The strains used in the experiments (listed in Supplementary Table 2) were grown
as described previously 9 (link). The
OKF6/TERT-2 oral epithelial cell line (provided by Jim Rheinwald,
Dana-Farber/Harvard Cancer Center, Boston, MA) 29 (link) was grown as described 9 (link),29 (link). OKF6/TERT-2 cells have been authenticated by
RNA-Seq3 (link), and have been
tested for mycoplasma contamination. To determine the effects of the various
inhibitors, the host cells were treated for 1 h prior to stimulation or
infection with 2.5 μM dasatinib 30 (link), 400 μM EphA2 antagonist, a
2,5-dimethylpyrrolyl benzoic acid derivative 15 (link),31 (link), 50 μM Stat3 inhibitor S31-201 32 (link), 1μM gefitinib 16 , 3 μg/ml dectin-1 mAb
(R&D Systems) 33 . In other
experiments, the cells were stimulated with 50 μg/ml depleted zymosan
(InvivoGen), 50 μg/ml mannan (Sigma), or 50 μg/ml laminarin
(InvivoGen). To deplete the OKF6/TERT-2 cells of EphA2, they were transfected
with random control siRNA (Santa Cruz Biotechnology; sc-37007), EphA2 siRNA
(Santa Cruz Biotechnology; sc-29304), or EphB2 siRNA (Santa Cruz Biotechnology;
sc-39949) with Lipofectamine 2000 (Invitrogen) following the
manufacturer’s instructions as described previously16 .
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4

Lectin Pathway Activation Prothrombin Cleavage

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Cleavage of prothrombin by C activated through the lectin pathway was assessed by coating the plates with 200 μg/ml mannan (Sigma-Aldrich) in 0.1 M bicarbonate buffer pH 8.8 overnight at +4°C. The free binding sites were blocked with PBS containing 2% BSA and the bound mannan was then incubated with 1/50 C1q-deficient serum in VBS for 2 hr at 37°C. After washing with VBS, a mixture of 694 nM prothrombin (Haematologic Technologies, VT, USA) and the substrate S-2238 (Chromogenix) in 0,5 mM Tris buffered saline pH 8,5 containing 20 mM CaCl2 was added and incubated at 37°C. The reaction was read at 405nm. A similar approach was used to evaluate thrombin generation by C activated through the lectin pathway by the MBL/β2-GPI complex assembled on HUVEC and incubated with 1/10 C1q-deficient serum, with or without MBL (1μg/ml). Thrombin formation was evaluated by adding prothrombin and the S-2238 substrate in Human Endothelial serum-free medium (GE Healthcare) at pH 7.4.
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5

Epithelial Cell Culture and Inhibitor Treatments

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The strains used in the experiments (listed in Supplementary Table 2) were grown
as described previously 9 (link). The
OKF6/TERT-2 oral epithelial cell line (provided by Jim Rheinwald,
Dana-Farber/Harvard Cancer Center, Boston, MA) 29 (link) was grown as described 9 (link),29 (link). OKF6/TERT-2 cells have been authenticated by
RNA-Seq3 (link), and have been
tested for mycoplasma contamination. To determine the effects of the various
inhibitors, the host cells were treated for 1 h prior to stimulation or
infection with 2.5 μM dasatinib 30 (link), 400 μM EphA2 antagonist, a
2,5-dimethylpyrrolyl benzoic acid derivative 15 (link),31 (link), 50 μM Stat3 inhibitor S31-201 32 (link), 1μM gefitinib 16 , 3 μg/ml dectin-1 mAb
(R&D Systems) 33 . In other
experiments, the cells were stimulated with 50 μg/ml depleted zymosan
(InvivoGen), 50 μg/ml mannan (Sigma), or 50 μg/ml laminarin
(InvivoGen). To deplete the OKF6/TERT-2 cells of EphA2, they were transfected
with random control siRNA (Santa Cruz Biotechnology; sc-37007), EphA2 siRNA
(Santa Cruz Biotechnology; sc-29304), or EphB2 siRNA (Santa Cruz Biotechnology;
sc-39949) with Lipofectamine 2000 (Invitrogen) following the
manufacturer’s instructions as described previously16 .
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6

DC-SIGN-Fc Binding ELISA Assay

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High-binding flat-bottom 96-well ELISA plates were coated overnight with 50 mL of 50 mg/mL ligand, i.e. pili sample B, dissolved in 0.2 M coating buffer at room temperature. Mannan (1 mg/mL, Sigma-Aldrich®) was coated as a positive control, whilst plain coating buffer served as negative control. After two washes with TSM (20 mM TrisHCl, 150 mM NaCl, 1 mM CaCl2, 2 mM MgCl2) the wells were blocked with 1% BSA (Sigma-Aldrich®) for 30 minutes at 37°C. DC-SIGN-Fc fragments were 15 minutes preincubated with blocking agents in TSM: the D1 DC-SIGN specific antibody (20 mg/mL) and calcium chelator EGTA (10 mM). After washing, the plate was incubated with 50 μL of DC-SIGN-Fc (with block) for 2 hours at room temperature on a shaking platform. The wells were washed with TSM with 0.1% Tween 20 (TSMT), prior to the addition of goat anti-human Fc-PO (Sigma-Aldrich®) dissolved in TSMT (30 minutes). After extensive washing with TSMT, the ELISA could be developed using a 10 mL substrate solution of 0.1 M NaAc, TMB and H2O2. 15 minutes later this reaction was stopped by the addition of 0.8 M H2SO4. Experimental read-out was performed at OD450.
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7

Candida Phagocytosis Assay with Dectin-1

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To block CR3, adherent RAW-Dectin1 cells were incubated with 10 μg blocking antibody to CD11b (monoclonal M1/70) or rat IgG2B isotype control (MAB0061; R and D systems) for 30 min at room temperature. After warming to 37°C, cells were incubated with Candida-BFP hyphae as described above. Following phagocytosis, monolayers were rinsed and fixed in 3% PFA as mentioned above. After permeabilization and blocking, described above, blocking antibody was detected using a Alexa488-conjugated secondary antibody against rat IgG (1:10,000; Jackson ImmunoResearch Labs), and viewed by confocal microscopy.
For sugar blocking experiments, adherent RAW-Dectin1 cells were pretreated 30 min with 100 μg mL−1 mannan (Sigma Aldrich) or laminarin (Sigma Aldrich), followed by infection with C.albicans in the continued presence of each sugar. In the case of laminarin, Candida-BFP hyphae were allowed to adhere to RAW-Dectin1 cells 10 min, followed by the addition of 100 μg mL−1 laminarin for the remainder of the 1 hr infection.
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8

Evaluating GAGs Inhibition of Mannan-MBL Interaction

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To evaluate whether GAGs could inhibit the mannan—MBL interaction, Maxisorp immunoassay plates were incubated overnight with 100 μg/ml mannan (Sigma, Zwijndrecht, The Netherlands) diluted in 0,1 M NaCO3, pH 9,6. After washing three times, plates were blocked with 1% BSA in PBS for 1 h. Thereafter, pooled serum diluted 1:50 in GVB++ buffer, described by Roos et al. (39 (link)), were pre-incubated with a concentration range of GAGs, for 15 min at room temperature. GVB++ buffer is Veronal-buffered saline (1,8 mM Na-5,5-diethylbarbital, 0,2 mM 5,5-diethylbarbituric acid, 145 mM NaCl) containing 0,5 mM MgCl2, 2 mM CaCl2, 0,05% Tween-20 and 0,1% gelatin, pH 7.5. The pre-incubated mixture was then incubated for 60 min on the mannan coated plates at 37°C. In the dose dependent binding of MBL to mannan, no GAGs were added. Bound MBL was detected with a DIG-labeled mouse anti-human MBL antibody 1:1,000 (mAb 3e7 from Hycult Biotech, Uden, the Netherlands) and a Sheep anti-DIG HRP labeled conjugate 1:8,000 (Roche Diagnostics, Mannheim, Germany). The assay was developed using tetramethylbenzidine (TMB) (Sigma, Zwijndrecht, The Netherlands) and the reaction was stopped with 1 M H2SO4. Absorbance was measured at 450 nm in a microplate reader. Data was expressed as % inhibition compared to non-inhibited control. Data was presented as representative experiment.
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9

Whole Blood Cytokine Assay with Immune Stimuli

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Heparinized venous blood was processed for culture within 6 hours after venipuncture. Whole blood was diluted 2 times in RPMI 1640 medium (Invitrogen, Carlsbad, CA, USA) supplemented with 100 U/mL penicillin (Astellas Pharma BV, Leiden, the Netherlands), 10 µg/mL streptomycin (Sigma-Aldrich, Saint Louis, MO, USA), 1 mM pyruvate (Sigma-Aldrich) and 2 mM L-glutamine (Sigma-Aldrich) and stimulated with 50 µg/mL polyinosinic-polycytidylic acid high molecular weight (poly(I:C); InvivoGen, San Diego, CA, USA), 50 ng/mL Pam2CGDPKHPKSF (FSL-1; InvivoGen), 100 ng/mL Pam3CSK4 (Pam3; EMC Microcollections GmbH, Tübingen, Germany), 100 ng/mL ultrapure lipopolysaccharide (LPS; InvivoGen), 10 µg/mL γ-D-Glu-mDAP (iE-DAP; InvivoGen), 100 µg/mL mannan (Sigma-Aldrich), 100 µg/mL curdlan (Wako Chemicals GmbH, Neuss, Germany) or 5 ng/mL 1-(palmitoyl)-2-(5-keto-6-octene-dioyl)phosphatidylcholine (KOdiA-PC; Cayman Chemicals, Ann Arbor, MI, USA), alone or in combination (Table 1). Medium was used as a negative control and 2 µg/mL phytohemagglutinin (PHA; Remel, Dartford, UK), a mitogen, as a positive control. 100 µL of ligand(s) in medium was added to wells containing 100 µL of diluted blood in 96-well round-bottom plates (Nunc; Roskilde, Denmark) and incubated in the presence of 5% CO2 at 37°C for 24 hours. Supernatants were harvested and stored at −80°C.
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10

Combination Adenovirus Vaccine for Cancer Immunotherapy

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The recombinant adenovirus was coupled with mannan (Sigma) as previously reported56 (link). In brief, adenoviruses were mixed with oxidizing mannan (OM) at a proportion of 1 × 108 PFU:14 mg/ml and incubated overnight at room temperature (RT) for AdTERT-m (AdTERT-mannan) or AdVEGFR2-m (AdVEGFR2-mannan) generation without any further purification. We observed that co-immunization of mice with dendritic cells (DCs) transfected with mRNAs that encode TERT and VEGFR-2 (mixed at a 1:1 ratio) exhibited a synergistic antitumour effect, as reported previously20 (link). We thus used recombinant adenovirus AdTERT-m and AdVEGFR2-m mixed at the ratio of 1:1 (1 × 108 PFU: 1 × 108 PFU) as our combination vaccine Ad(VEGFR2:TERT)-m (Ad(VEGFR2:TERT)-mannan). Additionally, we used phosphate-buffered saline (PBS), Ad-null virus (without the genes of interest) modified with or without OM (Adv-m and Adv, respectively), AdTERT-m alone and AdVEGFR2-m alone as controls.
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