The largest database of trusted experimental protocols

8 protocols using anti cd31 clone mec13

1

Isolation and Characterization of Adult Mouse Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells from adult mice were isolated as previously described [13 (link)]. Briefly, mice were euthanized, and organs were excised, minced, and digested with dispase II (Thermo Fisher Scientific), collagenase (Wako, Osaka, Japan), and type II collagenase (Worthington Biochemical Corp., NJ, USA) with continuous shaking at 37 °C. The digested tissue was filtered (40 μm filters) to obtain single-cell suspensions. Erythrocytes were lysed with ammonium-chloride-potassium buffer (0.15 M NH4Cl, 10 mM KHCO3, and 0.1 mM Na2-EDTA). Bone marrow cells were collected from the tibiae and femurs. Cell surface antigen staining was performed with anti-CD31 (clone MEC13.3, BD Biosciences, CA, USA) and anti-CD45 (Clone 30-F11, BD Biosciences) antibodies. Hoechst staining was performed as described previously [17 (link)]. Briefly, cell suspensions were incubated with Hoechst 33342 (5 mg/ml) (Sigma-Aldrich Japan) at 37 °C for 90 min in DMEM (Sigma-Aldrich Japan) supplemented with 2% FCS and 1 mM HEPES at a concentration of 1 × 106 nucleated cells/ml in the presence or absence of verapamil (50 mM, Sigma-Aldrich Japan). Propidium iodide (PI, 2 mg/ml; Sigma-Aldrich Japan) was added before FACS analysis to exclude dead cells. Stained cells were analyzed and sorted by a SOAP FACSAria (BD Bioscience), and data were analyzed using FlowJo Software (Treestar Software, San Carlos, CA, USA).
+ Open protocol
+ Expand
2

Immunohistochemical Analysis of Tumor Microenvironment

Check if the same lab product or an alternative is used in the 5 most similar protocols
Formalin-fixed paraffin embedded tissue sections were stained with antibodies against CD3 (rabbit polyclonal, catalogue #ab5690; Abcam), mouse α-smooth muscle actin (clone 1A4; Sigma-Aldrich), anti-Fibronectin (FN) (clone AB-10; Neomarkers), anti-CD31 (clone MEC 13.3) and anti-CD45 (clone 30 F11), both from BD Biosciences according to the manufacturer’s protocols.
Corresponding secondary horse-radish peroxidase-conjugated antibodies (DAKO, Glostrup, Denmark) were used, followed by incubation with chromogenic substrate 3,3′-diaminobenzidine (DAKO).
For double staining, secondary antibodies coupled to Alexa Fluor 488 or 568 (1:1500) were purchased from Molecular Probes. Sections were examined by means of confocal microscopy on a LSM 510 (Carl Zeiss Inc).
The blood vessel density was determined by quantifying CD31+ capillaries in 3-4 fields from two different sections of the tumor (magnification, ×200).
Quantification of CD3+ T-cells in tumors from 12-week-old PyMT mice and in pre-metastatic lungs was performed as described [13 (link)].
+ Open protocol
+ Expand
3

Multiparametric Flow Cytometry for Stem Cell Subsets

Check if the same lab product or an alternative is used in the 5 most similar protocols
For staining of SKL cells (Sca-1+ c-Kit+ Lin–), VSELs (Sca-1+ Lin– CD45–), MSCs (Lin– CD45– CD31– CD90+), and EPCs (Lin– CD45– CD31+) the following monoclonal antibodies were used: FITC–anti-CD117 (also known as c-Kit, clone 2B8; BioLegend, San Diego, CA, USA) and PE–Cy5–antimouse Ly-6 A/E (also known as Sca-1, clone D7; eBioscience, San Diego, CA, USA). All anti-mouse lineage marker antibodies, including anti-CD45R (also known as B220, clone RA3-6B2), anti-Ter-119 (clone TER-119), anti-CD11b (clone M1/70), anti-T cell receptor β (clone H57–597), anti-Gr-1 (clone RB6-8C5), anti-TCRγδ (clone GL3), and anti-CD45 (clone 30-F11), conjugated with PE; anti-CD31 (clone MEC 13.3), conjugated with APC; and anti-CD90.2 (clone 30-H12), conjugated with BV510, were purchased from BD Biosciences. Staining was performed in RPMI-1640 medium containing 2% FBS. All monoclonal antibodies were added at saturating concentrations, and the cells were incubated for 30 min on ice, washed twice, and analyzed with an LSR II flow cytometer (BD Biosciences) [15 (link), 17 (link)].
+ Open protocol
+ Expand
4

Single-cell Isolation and Staining

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells from C57BL/6 and C57BL/6-Tg (CAG-EGFP) mice were isolated and cell-surface antigen staining was performed as previously described in ref. 13 (link). Briefly, mice were euthanized, and organs were excised, minced, and digested with dispase II (Thermo Fisher Scientific), collagenase (Wako, Osaka, Japan), and type II collagenase (Worthington Biochemical Corp., Lakewood, NJ, USA) with continuous shaking at 37 °C. The digested tissue was filtered (40-μm filters) to obtain single-cell suspensions. Cell surface antigen staining was performed with anti-CD31 (clone MEC13.3, BD Biosciences, San Diego, CA, USA), anti-CD45 (clone 30-F11, BD Biosciences), and anti-CD157 (clone BP3, Biolegend) antibodies. The stained cells were analyzed and sorted by a SOAP FACSAria (BD Bioscience) and data were analyzed by FlowJo Software (Treestar Software, San Carlos, CA, USA).
+ Open protocol
+ Expand
5

Multilineage Stem Cell Characterization

Check if the same lab product or an alternative is used in the 5 most similar protocols
For staining of Lin/Sca-1+/c-Kit+ (SKL cells), Lin/Sca-1+/CD45+ (HSCs), Sca-1+/Lin/CD45 (VSELs), Lin/CD45/CD31+ (EPCs), and Lin/CD45/CD31/CD90+ (MSCs), the following monoclonal antibodies were used: FITC–anti-CD117 (also known as c-Kit, clone 2B8; BioLegend, San Diego, CA, USA) and PE–Cy5–anti-mouse Ly-6 A/E (also known as Sca-1, clone D7; eBioscience, San Diego, CA, USA). All anti-mouse lineage marker antibodies, including anti-CD45R (also known as B220, clone RA3-6B2), anti-Ter-119 (clone TER-119), anti-CD11b (clone M1/70), anti-T cell receptor β (clone H57–597), anti-Gr-1 (clone RB6-8C5), anti-TCRγδ (clone GL3), and anti-CD45 (clone 30-F11), conjugated with PE; anti-CD31 (clone MEC 13.3), conjugated with APC; and anti-CD90.2 (clone 30-H12), conjugated with BV510, were purchased from BD Biosciences. Staining was performed in RPMI-1640 medium containing 2% FBS. All monoclonal antibodies were added at saturating concentrations, and the cells were incubated for 30 min on ice, washed twice, and analyzed with a FACSVerse cytometer (BD Biosciences) [26 (link)].
+ Open protocol
+ Expand
6

Immunophenotyping of Rare Cell Populations

Check if the same lab product or an alternative is used in the 5 most similar protocols
For staining of Lin/Sca-1+/c-Kit+ (SKL cells), Sca-1+/Lin/CD45 (VSELs), Lin/CD45/CD31+ (EPCs), and Lin/CD45/CD31/CD90+ (MSCs), the following monoclonal antibodies were used: FITC–anti-CD117 (also known as c-Kit, clone 2B8; BioLegend, San Diego, CA, USA) and PE–Cy5–anti-mouse Ly-6 A/E (also known as Sca-1, clone D7; eBioscience, San Diego, CA, USA). All anti-mouse lineage marker antibodies, including anti-CD45R (also known as B220, clone RA3-6B2), anti-Ter-119 (clone TER-119), anti-CD11b (clone M1/70), anti-T cell receptor β (clone H57–597), anti-Gr-1 (clone RB6-8C5), anti-TCRγδ (clone GL3), and anti-CD45 (clone 30-F11), conjugated with PE; anti-CD31 (clone MEC 13.3), conjugated with APC; and anti-CD90.2 (clone 30-H12), conjugated with BV510, were purchased from BD Biosciences. Staining was performed in RPMI-1640 medium containing 2% FBS. All monoclonal antibodies were added at saturating concentrations, and the cells were incubated for 30 min on ice, washed twice, and analyzed with an LSR II flow cytometer (BD Biosciences) [21 (link)].
+ Open protocol
+ Expand
7

Isolation and Characterization of Cardiac Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Heart tissue was cut into small pieces and digested by placement into a RPMI 1640 solution containing Type 2 collagenase (1 mg/ml) (Worthington Biochemical Corporation) and 10 U/ml DNase (Sigma-Aldrich) at 37°C for 60 minutes. The digested tissue was then passed through a 70-μm cell strainer and treated with ACK lysing buffer. Cells were stained with fluorochrome-labeled anti-CD45.2 (clone 104, eBioscience), anti-CD45.1 (clone A20, BD Biosciences), anti-MHC class II (clone M5/114.15.2, BioLegend), anti CD11b (clone M1/70, BioLegend), anti-CCR2 (clone 575301, R&D Systems), anti-CD64 (clone X54-5/7.1, BioLegend), and anti-CD31 (clone MEC13.3, BD Biosciences).
+ Open protocol
+ Expand
8

Tumor Vascular Density Quantification

Check if the same lab product or an alternative is used in the 5 most similar protocols
Tumor tissues were resected 2 days after inoculation. Staining used the following primary and secondary antibodies: anti-CD31 (clone Mec13.3; BD Bioscience) and Alexa flour 488 goat anti-rat IgG antibody (Molecular Probes). Hoechst 33342 (Thermo Fisher Scientific) was used for nuclear staining. Stained sections were analyzed on a Fluoview FV1000 confocal microscope (Olympus). Image analysis was performed using MetaMorph software on maximum projections of Zplane sections. The details of experimental procedure are summarized in Supplementary Materials and Methods.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!