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23 protocols using bmn673

1

Investigating PARP1 Regulation and Function

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Olaparib was purchased from LC laboratory. BMN-673, Veliparib, Niraparib, Rucaparib, MG-132 and Pomalidomide were obtained from Selleck. PDD 00017273 was purchased from Tocris. Peroxynitrite was purchased from Cayman Chemical. Antibodies against GAPDH and Poly-(ADP-Ribose) were purchased from Thermo and Trevigen, respectively. Antibodies against PARP1, SP1, H3, γH2A.X, CRBN, HA-Tag and VHL were purchased from Cell Signaling Technology. The PARP1-GFP plasmid was a gift from Dr. Xiaochun Yu (City of Hope). HA-Ub, lentiCRISPR-CRBN and control plasmids were constructed by standard molecular methods. All other chemicals and reagents were obtained from Sigma, unless stated otherwise.
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2

BMN673 Blocks Cigarette Smoke-Induced Response

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100 μM BMN673 (S7048, Selleckchem, Houston, TX) was added to HBE cultures one hour before exposure to smoke of eight cigarettes. Control cells were given an identical concentration of the diluent DMSO, as found in the experimental samples. Cells were fractionated and processed for western blot analysis three hours after smoke exposure.
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3

Evaluating Potent ATR Inhibitors

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The ATRi VE-821 and VX-970 were provided by Vertex Pharmaceuticals. Olaparib and BMN673 were purchased from Selleck Chemicals; cisplatin was purchased from Sigma.
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4

Evaluating PARP Inhibitors on Cellular Responses

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The following compounds were used at the indicated final concentrations: PJ-34 (10 μM, ALX-270-289-M001, Enzo Life Science), Olaparib (1-10 μM, AZD-2281, Selleckchem), Rucaparib (1-8 μM, AG-014699, Selleckchem), Talazoparib (6.25-50 nM, BMN673, Selleckchem), β-Nicotinamide adenine dinucleotide hydrate (20-200 μM, N7004, Sigma-Aldrich), hydrogen peroxide (0.02-0.5 mM, H3420, Sigma-Aldrich), Methyl methanesulfunate, MMS (0.01%, 129925, Sigma-Aldrich), PARG inhibitor (10 μM, PDD00017273, Tocris), FK866 (1 μM, F8557, Sigma-Aldrich), MG132 (10 μM, M7449, Sigma-Aldrich), cycloheximide (50 μM, C7698, Sigma-Aldrich).
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5

Multiparametric Analysis of Immune Responses

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GAPDH (AC033), STING (A3575), phosphorylated MEK1/2 (pMEK1/2) (AP0209), TBK1 (A14641), IRF3 (A11373) antibodies were from ABclonal. CD4 (ab183685), CD8 (ab209775), pERK1/2 (ab 214362), pSTAT1 (ab109461) and phosphorylated TBK1 (pTBK1) (ab 109272) antibodies were from Abcam. phosphorylated ERK1/2 (pERK1/2) (4370), pIRF3 (29047), STAT1 (14994) and phosphorylation of histone H2AX at Ser139 (γH2AX) (2577) antibodies were from Cell Signaling Technology.
Olaparib, BMN673, and trametinib were from Selleck. Cobimetinib, H151 and C176 were from MCE. Compounds were dissolved in DMSO and stored as 10 mM aliquots at instructions temperature. anti-PD-L1 antibody (BE0101, clone B7-H1) and IgG isotype control (BE0090) was from BioXcell. CD45 (BV605 30-F11), CD3e (APC-Cy7 145–2C11), mouse CD4 (FITC RM4–5), CD25 (PE-Cy7 PC61), Foxp3 (BV421 MF23), CD8a (PerCP-Cy5.5 53–6.7), Granzyme B (D2H2F), IFN-γ (PE XMG1.2), CD11c (PE-Cy HL3), I-A/I-E (BV421 M5/114.15.2), F4/80 (PE T45–2342), CD11b (FITC M1/70), CD49b (APC DX5), CD3e (APC-Cy7 145-2C11), ly-6G (PE 1A8), ly-6C (APC AL-21), Gr-1 (PerCP-Cy5.5), Fixable Viability Stain (BV510), Transcription Factor Buffer Set were from BD Biosciences.
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6

Investigating PARP1 Regulation and Function

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Olaparib was purchased from LC laboratory. BMN-673, Veliparib, Niraparib, Rucaparib, MG-132 and Pomalidomide were obtained from Selleck. PDD 00017273 was purchased from Tocris. Peroxynitrite was purchased from Cayman Chemical. Antibodies against GAPDH and Poly-(ADP-Ribose) were purchased from Thermo and Trevigen, respectively. Antibodies against PARP1, SP1, H3, γH2A.X, CRBN, HA-Tag and VHL were purchased from Cell Signaling Technology. The PARP1-GFP plasmid was a gift from Dr. Xiaochun Yu (City of Hope). HA-Ub, lentiCRISPR-CRBN and control plasmids were constructed by standard molecular methods. All other chemicals and reagents were obtained from Sigma, unless stated otherwise.
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7

Assessing PARP1 Inhibitor Efficacy in LCLs

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NHC1 lymphoblastoid cell lines (LCLs) harboring EBV B95.8 strain used in this study were cultured in 15% fetal bovine serum (FBS), 1% Penicillin/Streptomycin (Gibco) RPMI 1640 (Corning) at 37 °C and 5% CO2. To assess the half maximal inhibitory concentration (IC50), LCL were treated with PARP1 inhibitor BMN-673 (Talazoparib, LT-673; Selleck Chemicals, Cat. No. S7048) for 72 hours (h), 5 days or 7 days at several doses (serial dilution from 10µM to 0.01 nM), or DMSO (MilliporeSigma, Cat. No. D8418). For the successive experiment, BMN-673 was used at 200nM, 100nM, 50nM and 20nM. PARP1 activity was validated by DB, as detailed below. For SCGE, cell was treated with 20 µM Etoposide (MilliporeSigma, Cat. No. E1383) for 4 h.
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8

Cisplatin-Resistant Lung Cancer Cells

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A549 (a human lung adenocarcinoma cell line), A549/DR (a cisplatin-resistant A549 cell line), and SK-MES-1 (a human lung squamous cell carcinoma cell line) were purchased from the Shanghai Institute for Biological Science (China). The cells were cultured in RPMT-1640 supplemented with 5% fetal bovine serum, 1% glutamine, 100μl/ml penicillin, 100μl/ml streptomycin. A549/DR cells were routinely maintained in culture media containing 0.5μg/ml cisplatin and growth in drug free media for 3 days before the experiment. Antibodies to the following antigen used in this study include: FANCD2, FAAP20, RAD51c, RAD51, Pol θ, Pol η, REV3, REV1, 53BP1, and gapdh were from Santa Cruz, BRCA2, p-ATM, p-CHK1 (S317), p-CHK2 (T68), p-KAP1(S824) were from Calibiochem, and γH2AX and H2AX were from Cell Signaling. Cisplatin was from Yangtze River Pharmaceutica, Carboplatin were from Qilu Pharmaceutical CO., Ltd, BMN673 was from Selleck Chemicals.
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9

Olaparib and BMN-673 Cytotoxicity Assay

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Olaparib (Sigma) in DMSO at 50 mM and BMN-673 (Selleck Chemicals) in DMSO at 10 mM were diluted in DMSO to make 1000X solutions and added directly to cell culture media, with 0.1% DMSO used as a control. 5-Bromo-2′-deoxyuridine (BrdU) (Sigma) at 1 mM in DMSO was diluted directly in cell culture media for a final concentration of 10 μM.
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10

Combination Therapy Protocol for Cancer

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SAHA, olaparib, BMN-673, AGI-5198 and temozolomide were all obtained from SelleckChem, and dissolved in DMSO for cell culture experiments. For animal tumor studies, BMN-673 was diluted in a vehicle containing 10% dimethylacetamide, 6% Kolliphor HS 15 and 84% PBS. SAHA was diluted in PBS. Both were administered to mice via oral gavage five days a week, for three weeks. Octyl-2-HG ((2R)-octyl-alpha-hydroxyglutarate) (Cayman Chemical) and Octyl-α-KG (Sigma-Aldrich) were dissolved in DMSO. Horizon Dharmacon ON-TARGETplus Human BRCA1 and RAD51 siRNA were used at 20 nM for 72 hours.
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