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8 protocols using dynabeads flowcomp mouse pan t cd90.2 kit

1

Isolation of Mouse Lung ILC2s

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LinCD90+CD127+Sca-1+Klrg1hi ILC2s were enriched from the lungs of Rag1−/− mice using Dynabeads FlowComp Mouse Pan T (CD90.2) kit (Invitrogen), followed by cell sorting on a FACSAria II (BD Biosciences).
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2

Isolation and Analysis of Murine Splenic T Cells

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Naive or DSS‐treated mice were euthanized, and spleens were collected. Splenic tissue was compressed through a 100 μm cell strainer with 15 ml isolation buffer (PBS supplemented with 0.1% BSA and 2 mM EDTA). Cells were centrifuged at 350 g for 5 min followed by RBCs lysis on ice for 5 min with 10 ml 1X RBC Lysis Buffer (Biolegend, CA). Lysis buffer was diluted with 30 ml isolation buffer and centrifuged at 350 g for 5 min. Cell pellet was washed with 15 ml isolation buffer, centrifuged at 350 g for 5 min and resuspended in 1 ml for cell counts using Countess II (Invitrogen, MA). T cells were purified with Dynabeads® FlowComp™ Mouse Pan T (CD90.2) kit according to manufacturer's protocol (Invitrogen). T cells were counted and used for Flow Cytometry. Cells were blocked with TruStain FCx Plus antibody (Biolegend), and True‐Nuclear™ Transcription Factor Buffer Set (Biolegend) was used for fixation according to manufacturers’ protocol. Cell markers CD4, IL‐17A and IFN‐γ were purchased from Biolegend and flow performed on the Cytek Aurora (Cytek Biosciences).
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3

ILC2 Enrichment, Transduction, and Analysis

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Lung mILC2s were enriched from TMX-Rag1−/−Bcl11bF/Fcre-ERT2 mice using Dynabeads FlowComp Mouse Pan T (CD90.2) kit (Invitrogen) and cultured for two days in 20% FBS DMEM with 1U/ml IL-2, 20ng/ml IL-7 and 20ng/ml IL-33. Retroviruses were generated by transfecting Plat E cells with Gfi1-NGFR or NGFR retroviral vectors (Del Real and Rothenberg, 2013 (link)). Retroviral supernatants were collected two days after transfection and supplemented with 4µg/ml polybrene and ILC2s were infected by spinoculation, as previously described (Cismasiu et al., 2006 (link)). ILC2s were evaluated for NGFR, ST2, Gata3, Rorα, IL-23R and Rorγt by FACS analysis 5 days after transduction.
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4

Splenic T Cell Isolation and Characterization

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MRL/Lpr mice splenic T cells were purified with Dynabeads FlowComp Mouse Pan T (CD90.2) Kit and dissociated from beads according to manufacturer's instructions (Thermo Fisher). After staining purified T cells with PE anti-CD138 antibody, TCRβ+CD138− and TCRβ+CD138+ cells were further separated with anti-PE magnetic microbeads (Miltenyi Biotec). Depending on the experimental objective, purified TCRβ+CD138+ and TCRβ+CD138− cells were stimulated with 1 μg/ml anti-CD3 and anti-CD28 antibodies (BD Pharmingen), 10 ng/ml PMA and 100 ng/ml Ion, 100 mg/ml collagenase I, 100 mg/ml collagenase D, 2.5 mg/ml trypsin, 10 μM leupeptin, 500 μM aminophenyl mercuric acetate (all from Sigma–Aldrich), 10 μM focal adhesion kinase inhibitor 14 (Cayman chemicals), 10 μg/ml MMP9, TrypLE, or defined trypsin inhibitor (all from Thermo Fisher) for indicated duration, and the expression levels of cell surface CD138 were quantified by fluorescence-activated cell sorting (FACS). trypsin gene expression levels were quantified by quantitative PCR, and trypsin protein was analyzed by Western blot using rabbit polyclonal trypsin antibody (Thermo Fisher).
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5

Generation of Mixed Bone Marrow Chimeras

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For generation of mixed BM chimeras, BM cells were isolated from WT and FL (Foxp3Cre–ERT2CXCR4WT/WT or Foxp3Cre–ERT2CXCR4FL/FL, respectively) mice, which were maintained on a tamoxifen diet for 4–5 wk, and from CD45.1 mice (as described above). BM cells from WT and FL mice were T cell–depleted using Dynabeads FlowComp Mouse Pan T (CD90.2) Kit (Thermo Fisher Scientific), mixed with similarly prepared competitor (CD45.1) BM cells at a 1:1 ratio, and transplanted (1 × 106 cells total) into lethally irradiated (950 rad) CD45.1 mice by i.v. injection.
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6

Hematopoietic Stem Cell Transplantation

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Recipient animals were irradiated with 2 doses of 500 rad from a Cesium-137 irradiator. Donor bone marrow was depleted of T cells and RBCs using the Dynabeads FlowComp Mouse Pan T CD90.2 kit (Thermo Fisher Scientific), with addition of biotinylated anti-Ter119 antibody (BioLegend). 5–10 × 106 cells were delivered retro-orbitally under isoflurane anesthesia. Mice were kept on neomycin for 3 wk following generation of chimeras.
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7

Purification and Characterization of Splenic T-cell Subsets

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Splenic T cells from MRL/Lpr mice were purified with Dynabeads™ FlowComp™ Mouse Pan T (CD90.2) Kit and dissocated from beads as per manufacture's instructions (Thermo Fisher). Purified T cells were staind with PE-conjugated anti-CD138 antibody, and TCRβ+CD138+ and TCRβ+CD138- cells were further separated with anti-PE magnetic MicroBeads (Miltenyi Biotec, Auburn, CA). After three washes with PBS, the purity of isolated TCRβ+CD138+ cells was >95% in all experiments as determined by flow cytometry. For in vivo transfer, purified TCRβ+CD138+ and TCRβ+CD138- cells were suspended in PBS and 1 × 107 cells in 100 μl were i.v. injected into recipient mice. For in vitro culture, CD4+TCRβ+CD138- cells were further isolated from purified TCRβ+CD138- cells using the CD4 (L3T4) MicroBeads (Miltenyi Biotec), and unbound cells were identified as CD8+TCRβ+CD138- cells (over 94% purity). To block mTOR, isolated CD4+TCRβ+CD138- cells were cultured in the presence of 100 nM rapamycin (Tocris Biosciences, Minneapolis, MN). After 3 days of incubation cell viability as well as CD138 and CD4 expression levels were assessed in flow cytometry.
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8

Purification and Fractionation of Splenic T Cells from MRL/Lpr Mice

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Splenic T cells from MRL/Lpr mice were purified with Dynabeads™ FlowComp™ Mouse Pan T (CD90.2) Kit and dissocated from beads as per manufacture's instructions (ThermoFisher). Purified T cells were staind with PE-conjugated anti-CD138 antibody, and TCRβ+CD138+ and TCRβ+CD138-cells were further separated with anti-PE magnetic MicroBeads (Miltenyi Biotec, Auburn, CA). After three washes with PBS, cells were suspended in PBS and 1 x 10 7 cells in 100 μl were i.v. injected into recipient mice. TCRβ+CD4+CD138cells were isolated from TCRβ+CD138-cells using the CD4 (L3T4) MicroBeads (Miltenyi Biotec), and unbound cells were identified as TCRβ+CD8+CD138-cells.
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