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P21cip1 waf1

Manufactured by Cell Signaling Technology
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P21Cip1/Waf1 is a primary antibody that recognizes the p21 protein, also known as cyclin-dependent kinase inhibitor 1 or CDK-interacting protein 1. The p21 protein plays a role in cell cycle regulation by inhibiting cyclin-dependent kinases.

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8 protocols using p21cip1 waf1

1

Western Blot Analysis of Cell Signaling

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Proteins were extracted using RIPA buffer with 1% Protease inhibitor cocktail (Nacalai Tesque). After determination of the protein concentration using Protein Quantification Assay (Takara Bio Inc.), all samples were denatured in Laemmli sample buffer for 5 min at 100 °C. The denatured samples were separated by SDS-polyacrylamide gel electrophoresis and transferred onto a polyvinylidene difluoride membrane (EMD Millipore). After blocking with 5% milk or 5% BSA, the membranes were incubated with the primary antibodies as follows: p16INK4a (1:1000, IBL, 11104), p21Cip1/Waf1 (1:1000, Cell Signaling Technology, 2947), Lamin B1 (1:5000, Abcam, ab16048), RB (1:500, Santa Cruz, sc-102), phospho-RB (Ser780) (1:1000, Cell Signaling Technology, 9307), p53 (1:1000, Santa Cruz, sc-6243), phospho-p53 (Ser15) (1:1000, Cell Signaling Technology, 9284) and α-Tubulin (1:2000, Sigma-Aldrich, T9026). The membranes were then incubated with the secondary antibodies as follows: anti-mouse IgG (1:2000, Cell Signaling Technology, 7076), anti-rabbit IgG (1:2000, Cell Signaling Technology, 7074) and visualized with Amersham ECL prime/select (GE Healthcare), followed by detection with chemiluminescence using LAS-3000mini imaging system (Fujifilm) and by analysis of data using Multi Guage V3.1 (Fujifilm). Uncropped and unprocessed scans of the blots are included in the Source data file.
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2

Immunoblotting and Immunocytochemistry Protocol

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Rat monoclonal anti-BrdU (#OBT0030; AbDSerotec, Raleigh, NC), rabbit polyclonal anti-cytoskeletal actin (β-actin) (#A300-491A; Bethyl Laboratories, Inc., Montgomery, TX) and mouse monoclonal anti-Ki67 (NCL-Ki67-MM1; Novocastra/Leica Microsystems, Inc., New Castle, UK), rabbit polyclonal to p85 fragment of PARP (#G734A, Promega, Madison, WI) and cyclin B (BD #61029; BD Biosciences, San Jose, CA) were procured from their respective manufacturers. Rabbit polyclonal to cleaved caspase-3 (#9661), p21Cip1/WAF1 (#CS2947), Cdc25C (#CS4648), p-Cdc25C (#CS9528), Cdc2 (#CS9112) and p-Cdc2 (#CS9111) were purchased from Cell Signaling Technology, Inc., Danvers, MA. Antibodies for p53 (#SC-6243), p27kip21 (#SC528), p19 (#SC-71810), cyclin E (#SC481), Cdk2 (#SC6248) and Cdk4 (#SC23896) were all from Santa Cruz Biotechnology Inc., CA. Peroxidase-conjugated secondary (H&L chain-specific) antibodies for Western blots, goat anti-mouse IgG (#401253) and goat anti-rabbit IgG (#401315) were purchased from Calbiochem-Novabiochem Corp., CA. Secondary antibodies for immunocytochemical analyses, Cy3-AffiniPure donkey anti-rat IgG (#712-165-153) and Cy3-AffiniPure goat anti-mouse IgG (#115-165-003) were procured from Jackson Immuno Research Laboratories, Inc., West Grove, PA.
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3

Protein Expression Analysis by Western Blot

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Cells were seeded at 3×105 cells per well in 6-well plates and duplicate wells were treated with siRNA at the indicated concentration for 48 hours. Cell lysates were prepared and total protein concentration determined by the BCA protein assay (ThermoFisher, Waltham MA). 20 µg aliquots of each sample were separated on 5–12% SDS-polyacrylamide gels, transferred to nitrocellulose blotting membrane (Bio-rad, Hercules CA) and immunoblotted with antibodies directed against ATM, ATIC (Abnova, Taiwan), NBN (Cell Signaling, Danvers MA), MTPAP (EMD Millipore, Billeria MA), p53 (Santa Cruz, Dallas TX), p21(Cip1 /WAF1), cyclin B, tubulin, AMPK or Phospho-T172 AMPK (Cell Signaling, Danvers MA), all at a dilution of 1:1000, and incubated at 4 °C overnight. Membranes were washed and incubated with horseradish peroxidase-conjugated secondary antibodies for 1 hour at room temperature, washed and developed using enhanced chemiluminescence protocols (ECL; GE Health Care Life Science, Piscataway Township NJ) and quantified using ImageQuant software (GE Health Care Life Science, Piscataway Township NJ).
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4

Western Blot Analysis of Cellular Proteins

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Equal amounts of protein lysates were separated by SDS-PAGE and were transferred onto PVDF membranes. The filters were probed with the following specific primary antibodies: Cx32 (Thermo), green fluorescent protein (GFP; Santa Cruz Biotechnology), histone deacetylase 1 (HDAC1; Proteintech), matrix metallopeptidase 2 (MMP2; Epitomics), vascular endothelial growth factor (VEGF; Thermo), proliferating cell nuclear antigen (PCNA; Abcam), beta-actin (Sigma), acetylated-p53 (Upstate Biotechnology), p53, Akt, phosphorylated-Akt, cyclin D1, and p21Cip1/Waf1 (Cell Signaling Technology). The blots were then incubated with horseradish peroxidase-conjugated secondary antibodies (Pierce) and visualized by chemiluminescence.
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5

Investigating Cellular Mechanisms via Multimodal Assays

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3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl-tetrazolium bromide (MTT), the Propidium Iodide (PI) Cell Cycle Assay Kit and the Annexin V-FITC/PI Apoptosis Detection Kit were purchased from Beyotime (Jiangsu, China). The All-in-One™ First-Strand cDNA Synthesis Kit, the All-in-One™ miRNA qRT-PCR Detection Kit and miRNA primers were purchased from Genecopoeia (Rockville, MD, United States). DMEM and fetal bovine serum were obtained from Thermo Fisher Scientific (Waltham, MA, United States). All primary antibodies including p21Cip1/Waf1, E-cadherin, β-catenin, vimentin and snail, mTOR, p-mTOR (Ser2448), p-4E-BP1 (Thr37/46), LC3 and β-actin were purchased from Cell Signaling Technologies (Danvers, MA, United States). All other common chemicals and buffers were from Boster (Wuhan, China).
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6

Quantitative Western Blot Analysis

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For western blot analysis, cell extracts (MDA-MB231, MB231_SC-4 d, MB231_SC-7 d) were prepared. Each protein's concentration was determined using the BCA protein assay kit (Thermo Fisher Scientific). The proteins (30 μg per sample) were separated on 4–12% gradient gels (Thermo Fisher Scientific) and transferred to nitrocellulose membrane (Thermo Fisher Scientific) by iBlot 2 Dry Blotting System (Thermo Fisher Scientific). Blots were blocked with blocking buffer (Bio-Rad Laboratories, Hercules, CA) for 30 min and incubated at 4 °C overnight with one of the following primary antibodies: p21Cip1/Waf1 (1 : 1000 dilution, Cell Signaling Technology, #2947), phospho-Rb (Ser807/811, 1 : 1000 dilution, Cell Signaling Technology, #9308) Lamin B1 (1 : 1000 dilution, Cell Signaling Technology, #13435) and beta-actin (1 : 1000 dilution, Cell Signaling Technology, #4967). The next day, blots were washed 3 times (5 min each) with PBS (0.1% Tween-20). The membranes were incubated with horseradish peroxidase (HRP)-conjugated goat anti-mouse IgG or anti-rabbit IgG secondary antibody (1 : 2000 dilution, Cell Signaling Technology) for 1 h at RT. The immunoreactive proteins on the membranes were visualized using Supersignal™ West Femto substrate (Thermo Fisher Scientific). Immunoblot signals were developed with a C400 image machine (Azure Biosystems, Dubin, CA) and quantified by ImageJ.
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7

TOFA Induces Cell Cycle Arrest and Apoptosis

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TOFA was obtained from SANTA CRUZ (California, USA), Fetal bovine serum (FBS), DMEM medium and penicillin/streptomycin were obtained from Hyclone (Logan, UT, USA). 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl-tetrazolium bromide (MTT) Annexin V-FITC/PI Apoptosis Detection Kit and Cell Cycle Assay Kit were purchased from Beyotime (Jiangsu, China). Bovine serum albumin (BSA), Dimethyl sulfoxide (DMSO), Ribonuclease (RNase A) and LY294002 were purchased from Sigma-Aldrich (St.Louis,MO,USA). RIPA Lysis Buffer, Pierce™ BCA protein assay kit, protease inhibitor cocktail, the polyvinylidene difluoride (PVDF) membrane and Super Signal West Pico Chemiluminescent Substrate detection kit was purchased from Thermo Fisher Scientific (Waltham, MA, United States). The antibodies such as p21Cip1/Waf1, CDK1, Cyclin B1, Bax, Bcl-2, Cleaved caspase 3, p-AKT (Ser473), p-mTOR (Ser2448), p-p70S6K (Ser371) and GAPDH were obtained from Cell Signaling Technology Inc. (Beverly, MA, USA).
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8

Immunoblot Analysis of Cell Signaling

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Whole-cell lysates were prepared as previously described22 (link), 25 (link). For immunoblot analysis, equal amount of proteins (50mg) were resolved over 12% SDS-polyacrylamide gel electrophoresis and transferred to nitrocellulose membrane. The membranes containing the transferred protein were blocked in blocking buffer (5% nonfat dry milk, 1% Tween-20 in 20 mM Tris-buffered saline, pH 7.6) for 2 h at room temperature, and then incubated with appropriate monoclonal primary antibody in blocking buffer overnight at 4°C. After incubation with appropriate secondary antibodies, the membranes were washed three times with Tris buffer with tween-20, and then visualized using enhanced chemiluminescence (Boston Bio Products, Ashland, MA, USA). Antibodies for CDK4, cleaved caspase 3 (Asp175), p53 and p21Cip1/Waf1 were purchased from Cell Signaling Technology (Beverly, MA, USA). Antibody for β-actin was from Sigma-Aldrich.
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