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27 protocols using pdgf aa

1

Stepwise Differentiation of iPSCs to Leydig-like Cells

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The point at which iPSCs were expanded to ~70% confluency in the E8 medium was defined as day −2, and at this point when iPSCs were changed into E7 medium (no FGF2) for 2 days to prepare differentiation. From day −5 to 0, the medium was refreshed daily. Prior to the beginning of differentiation, iPSCs were cultured in a differentiation-inducing medium composed of DMEM/F12, 1% bovine serum albumin (BSA) (Sigma), 5 mm ITS, 5 ng/mL LH. From 0–7 days, 0.2 μm SAG (DHH agonist, Sigma), 5 μm 22R-OHC (Steraloids, RI, USA), and 5 mm Li were added into iPSC-DIM. From 7–10 days, 5 ng/mL PDGF-AA (Sigma) and 5 ng/mL FGF2 (Sigma) were added into iPSC-DIM. From 10–17 days, 5 ng/mL PDGF-AA, 5 nM IGF1 (Sigma), and 10 μm Androgen (Sigma) were added into iPSC-DIM. From 17–20 days, 10 ng/mL PDGF-AA and 10 ng/mL FGF2 were added into iPSC-DIM. From 20–25 days, 5 ng/mL LH, 0.5 mm retinoic acid (RA, Sigma) and 1 mm 8-Br-cAMP (Sigma) were added into iPSC-DIM. From day 0 to 25, the medium was changed every 2 days by fresh iPSC-DIM. From 25–30 days, the cells were mechanically enriched by scraping away clonal iPSC-like cells. The remaining Leydig-like cells were kept in Enrichment Medium contained DMEM/F12, 5% FBS, 2.5% HS, 1 × sodiumpyruvate (Invitrogen), 1 × GlutaMAX (Invitrogen), and 1% P/S for the subsequent assays. The medium was changed every 2 days by fresh Enrichment Medium.
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2

Luminex-based Neurodegenerative Disease Panel

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Luminex kits for human neurodegenerative disease panel three (PDGF-AA and PDGF-AB/BB) were acquired from Millipore (cat. no. HNDG3MAG-36K) (Millipore Inc Billerica, MA, USA) and performed according to manufacturer instructions. Pre-treatment of serum samples and parameters in a FLEXMAP3D (Luminex, TX, USA) were similar to previous reports.18 (link) Median fluorescence intensity (MFI) was determined and used to estimate serum concentration of PDGF-AA and PDGF-AB/BB. Protein concentrations were calculated according to the standard curve using a known concentration.
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3

Multiplex Cytokine Profiling of Secretome

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Serum-free medium (0.5 ml) was incubated with the miRNA mimics transfected cells for 24-hours, and the supernatants were collected for measurement of cytokine secretion. Based on our previous observation of the effects of co-culture upon cytokine secretion [22 (link)], a 16-plex immuno-multiplex assay was custom designed and purchased from Millipore (Billerica, MA), including FGF-2, Eotaxin (CCL11), G-CSF, GM-CSF, IP10 (CXCL10), MIP1α (CCL3), RANTES (CCL5), VEGF, IFNα2, IL-10, MDC (CCL22), PDGF-AA, PDGF-AB/BB, sCD40L, IL-1RA, and IL-7. Cyotokine concentrations (pg/ml) were determined using BeadView™ software (Millipore).
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4

Oligodendrocyte Progenitor Cell Culture

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Dulbecco’s modified Eagle Medium (DMEM) (10-017-CV), DMEM/F12 50:50 (10-090-CV), N2-supplement (17502-048), and penicillin/streptomycin (15140) were from Invitrogen (Carlsbad, CA, USA); Hank’s balanced salt solution (HBSS) (21-022-CV), 0.25% trypsin (25-050-CV) and sodium pyruvate (25-000-Cl) were from Mediatech (Manassas, VA, USA); fetal bovine serum (FBS) (SH30070.03) was from Hyclone (Waltham, MA, USA); FGF-2 (01–106) and PDGF-AA (01–309) was from Millipore (Temecula, CA, USA). Laminin was from R&D (Minneapolis, MN, USA). All other chemicals not specifically mentioned were purchased from Sigma (St. Louis, MO, USA).
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5

Culturing Mouse Cerebellar Slices

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Primary cerebellar cultures were prepared from C57BL/6J mice at postnatal day 10 as previously described [55 (link), 56 (link)]. Briefly, cerebella were embedded in 1% agarose and sagittally sectioned in ice-cold DPBS (Sigma‒Aldrich, G8769) supplemented with 5% glucose (Sigma‒Aldrich, G8769) at 300 μm using a Leica VT1000S vibrating microtome. Slices were immediately placed in 24-well plates on individual 0.4 μm 12 mm diameter Millicell-CM cell culture inserts (Millipore, PICM01250) and grown in 350 μL of cell culture medium containing 50% BME (Thermo Fisher, 21010046), 15% heat-inactivated horse serum (Thermo Fisher, 16050114), 25% Hank's solution (Sigma‒Aldrich, H4641), 0.5% glucose, 1% GlutaMAX™ Supplement (Thermo Fisher, 35050061), 1% penicillin‒streptomycin (Corning, 30-002-CI), N2, and 10 ng/mL PDGF-AA (Sigma‒Aldrich, P3076). The slices were incubated at 37 °C in 5% CO2. Half-volume media changes were made two days after plating. After 4 days, mouse cerebellar slices were treated with 10 µL of Nef or Ctrl EVs once daily for 2 or 4 days. The slices were fixed with 4% PFA for 15 min, delipidated in ice-cold 2.5% acid methanol for 15 min at − 20 °C, and subsequently processed for immunohistochemistry as described below.
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6

In Vitro NPC Proliferation and Differentiation

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Based on the minimal requirements for NPC proliferation and differentiation, we created four distinct experimental groups with different growth factor concentrations/combinations for our in vitro experiment (Table 1): no growth factors (group 1; control group), 10 ng/ml EGF + 10 ng/ml bFGF (group 2; minimum concentration/normal combination group), 20 ng/ml EGF + 20 ng/ml bFGF (group 3; normal concentration/combination group), and 20 ng/ml EGF + 20 ng/ml bFGF + 6 ng/ml PDGF-AA (Sigma-Aldrich, USA; group 4; normal concentration/enhanced combination group). NPCs at the third passage (p3) with a density of 2 − 3 × 105 cells/ml were incubated with the corresponding growth factor combination/concentration groups in DMEM/F12 with sodium bicarbonate and L-glutamine, 1% penicillin/streptomycin and 1x N2 supplement in a humidified incubator at 37°C with 5% CO2 for seven days. Medium change (50%) was performed daily. After 7 days, the cells were fixed with 4% paraformaldehyde (PFA) (Santa Cruz, USA) for 20 minutes and washed with PBS before they were subjected to immunofluorescence staining. All experiments were performed in triplicate on 24-well plates.
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7

Purification of Oligodendrocyte Precursor Cells

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Mixed glial cultures were generated from 1 to 2-day-old mice pups as described previously [17 (link)]. Briefly, the cerebra of mice pups were dissected, minced, and digested at 37 °C using a neural tissue dissociation kit (Miltenyi Biotec, catalog #130-092-628) to generate a single-cell suspension. Cells were plated into 75-cm2 flasks and grown in DMEM with 10% fetal bovine serum (FBS) at 37 °C and 5% CO2 for the next 10 days. After 6–8 days, oligodendrocyte precursor cells (OPCs) can be visualized growing upon a mesh of astrocytes. On the 10th day, OPCs were purified from mixed glial cells by shaking. Cells were shaken initially for 1 h at 200 rpm to remove microglia, refed, and shaken again for 18–20 h at 37 °C at 200 rpm. OPCs were collected by centrifugation at 10 min at 100 × g. OPCs were then cultured in oligodendrocyte medium (Sciencell, catalog #1621). PDGF-AA (Sigma) was added at 10 ng/ml to Sato medium for allow for oligodendrocyte growth.
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8

Isolation and Differentiation of Primary Cortical OPCs

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Primary cortical OPCs were prepared and maintained as described previously.
35 Briefly, cells were dissociated from the cortex of neonatal mice after 1–3 days. Dissociated cells were plated in 75‐cm2 flasks coated with 0.01% Poly‐D‐lysine (A3890401; Gibco) and maintained in DMEM containing 20% heat‐inactivated fetal bovine serum and 1% penicillin/streptomycin. After 10–12 days of inoculation, cells were placed on an orbital shaker at 37°C and shaken at 200 rpm for 1 h to remove microglia. The medium was then replaced with fresh medium and allowed to stand for 4 h before being shaken horizontally at 220 rpm for 16–18 h. The suspension was collected and left in the incubator for 30 min to remove astrocytes and microglia. The non‐adherent cells were collected and replanted in neurobasal medium containing glutamine, 1% penicillin/streptomycin, 10 ng/mL PDGF‐AA (100‐13A; Peprotech), 10 ng/mL FGF (AF‐100‐18B; Peprotech), 2% B27 (17504044; Gibco), and 1% N2 (17502048; Gibco) supplement on poly‐DL‐ornithine‐coated plates. Four to five days after plating, the OPCs were used for experiments. For cell differentiation, PDGF‐AA and FGF growth factor were excluded from the OPCs medium, and 3,3′,5‐triiodo‐L‐thyronine (T3; 40 ng/mL; Sigma‐Aldrich) and ciliary neurotrophic factor (CNTF; 10 ng/mL; MCE) were added to allow their differentiation.
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9

Angiogenic Factors Stimulate EC Responses

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Selective growth factors and cytokines, including TNF-α (20 ng/mL), FGF2 (25 ng/mL, Chiron, Emeryville, CA, USA), VEGF (25 ng/mL, Genetech, Plano, TX, USA), IGF-1 (50 ng/mL, Sigma), PDGF-AA (20 ng/mL, Sigma), PDGF-BB (20 ng/mL, Sigma), PDGF-AB (20 ng/mL, Sigma), HGF (20 ng/mL, Sigma) and IL1-β (5 ng/mL, Sigma), were added in BAECs or HAECs. The concentration of the growth factors was in accordance with doses used in a previous study [60 (link)]. After 4 h treatment, Northern blot analysis or Quantitative-PCR analysis was performed.
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10

Expansion and Differentiation of Testis-Derived LSCs

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LSCs from all 13 testis biopsies were cultured in an expansion medium (EM) adapted for embryonic stem cell culture with little modification [44 (link)]. LSCs were maintained in this medium for at least 14 days. To induce differentiation, these cells were replated in a new medium containing differentiation-inducing factors. Differentiation-inducing medium (DIM) included DMEM containing 2 mM l-glutamine and 15 mM HEPES (Thermo Fisher Scientific), 10% fetal bovine serum (FBS) (Thermo Fisher Scientific), 1% penicillin/streptomycin (Thermo Fisher Scientific), 2 ng/ml EGF (Sigma-Aldrich), 1 ng/ml LIF (Sigma-Aldrich), 10 ng/ml PDGF-AA (Sigma-Aldrich), 1 μM dexamethasone (Sigma-Aldrich), and the insulin transferrin selenium (ITS) supplement (Thermo Fisher Scientific).
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