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5 protocols using dylight 549 anti mouse igg red

1

Co-expression of ANXA10 and CD24 in PDAC

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Double immunofluorescence staining was performed to examine the co-expression patterns of ANXA10 with CD24 (CSC marker for PDAC) in PanIN, IPMN, PDAC, and normal tissues, respectively. The slides were deparaffinized, rehydrated, and treated with citrate buffer for antigen retrieval and then 2% BSA to block non-specific binding as described above. To achieve double IF staining of ANXA10 and CD24, rabbit anti-human ANXA10 antibody (1:250, Abcam, Cambridge, MA) was mixed with mouse anti-human CD24 antibody (1:150, Abcam, Cambridge, MA). The antibody mixture was then incubated with the slides overnight at 4°C. Subsequently, DyLight 488 anti-rabbit IgG (green) and DyLight 549 anti-mouse IgG (red) (Vector laboratories, Burlingame, CA) were diluted (1:150) and incubated with the slides for 1 hr at room temperature. Nuclei visualization was explored by DAPI counterstaining (blue).
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2

Immunofluorescence Staining of CD90 and CD24

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Protein expression was determined by immunofluoresence (IF) staining [7 (link)]. Briefly, the tissue specimens were placed in xylene twice for 20 minutes and hydrated in 100% ethanol, 95% ethanol, 75% ethanol, 5 minutes each and water for 3 minutes. Antigen retrieval was completed by boiling the sections in solution (BioGenex HK080-9K) for 15 minutes. Subsequently, these were blocked with 2% BSA in PBS containing 0.05% Tween (PBST) for 1 hour at room temperature and incubated with rabbit anti-human CD90 antibody (1:100, Abcam, Cambridge, MA) or mouse anti-human CD24 antibody (1:150, Abcam, Cambridge, MA) at 4°C overnight. The secondary antibodies of DyLight 488 anti-rabbit IgG (green) or DyLight 549 anti-mouse IgG (red, Vector Laboratories, Burlingame, CA) were used at 1:150 dilution and incubated in a dark place for 1 hour at room temperature. CD90 staining was visualized in green and CD24 in red. Staining with DAPI (blue, 1:4000 dilution) presented nuclei visualization. The sections were dehydrated in alcohol and xylene, then cover-slipped with TM mounting medium (Sigma, USA).
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3

Immunofluorescence Staining of Colon Cancer TMAs

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The tissue microarrays (TMAs) of FFPE colon cancer tissues and normal tissues were purchased from US Biomax Inc. (Rockville, MD). The TMAs contained 155 cases of cancer tissues of different stages and 15 normal tissues, and the clinical pathologic characteristics are listed in Table 1. The FFPE tissue arrays were dewaxed as described previously [23 ,24 (link)]. The TMAs were treated with citrate buffer at pH6.0 (Invitrogen, Grand Island, NY) and then were blocked from non-specific binding by 2% BSA. To achieve double immunofluorescence staining of ALDH1 and other candidate markers, the mouse anti-ALDH1A1 antibody (BD, 1:75) was mixed with the rabbit anti-β-catenin (Abcam, 1:200) and rabbit anti-TGFβ1 (LifeSpan Biosciences, 1:100), respectively, and the mouse anti-NFκB(p65) antibody (Cell signaling, 1:400) was mixed with the rabbit anti-ALDH1A1 antibody (Abcam, 1:200). The antibody mixture was then incubated with the TMAs overnight at 4°C. Then DyLight 549 anti-mouse IgG (red) and DyLight 488 anti-rabbit IgG (green) (Vector laboratories, Burlingame, CA) were diluted (1:200) and incubated with the TMAs for 1 hr at room temperature. Nuclei visualization was performed by DAPI counterstaining (blue) (1:8,000). The TMAs were finally dehydrated in alcohol and cover-slipped.
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4

Immunofluorescence Staining of Colon Cancer TMAs

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The tissue microarrays (TMAs) of FFPE colon cancer tissues and normal tissues were purchased from US Biomax Inc. (Rockville, MD). The TMAs contained 155 cases of cancer tissues of different stages and 15 normal tissues, and the clinical pathologic characteristics are listed in Table 1. The FFPE tissue arrays were dewaxed as described previously [23 ,24 (link)]. The TMAs were treated with citrate buffer at pH6.0 (Invitrogen, Grand Island, NY) and then were blocked from non-specific binding by 2% BSA. To achieve double immunofluorescence staining of ALDH1 and other candidate markers, the mouse anti-ALDH1A1 antibody (BD, 1:75) was mixed with the rabbit anti-β-catenin (Abcam, 1:200) and rabbit anti-TGFβ1 (LifeSpan Biosciences, 1:100), respectively, and the mouse anti-NFκB(p65) antibody (Cell signaling, 1:400) was mixed with the rabbit anti-ALDH1A1 antibody (Abcam, 1:200). The antibody mixture was then incubated with the TMAs overnight at 4°C. Then DyLight 549 anti-mouse IgG (red) and DyLight 488 anti-rabbit IgG (green) (Vector laboratories, Burlingame, CA) were diluted (1:200) and incubated with the TMAs for 1 hr at room temperature. Nuclei visualization was performed by DAPI counterstaining (blue) (1:8,000). The TMAs were finally dehydrated in alcohol and cover-slipped.
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5

Phenotypic Characterization of CD90+ Cells

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Subclassification of the CD90+ population was investigated by the double immunostaining of CD90 with CD24 (CSC marker for PDAC), and cellular markers including α-smooth muscle actin (αSMA, a marker of activated pancreatic stellate cells), CD31 (endothelial vascular cell marker) and CD45 (leukocyte common antigen), respectively. The TMAs were dewaxed, rehydrated, and treated with citrate buffer for antigen retrieval and then 2% BSA to block non-specific binding as described above. To achieve double immunofluorescence (IF) staining of CD90 and the known markers, rabbit anti-CD90 (Abcam, Cambridge, MA) was mixed with mouse anti-CD24 (Abcam, Cambridge, MA), mouse anti-αSMA (Sigma), mouse anti-CD31 (Novocastra, Newcastle Upon Tyne, UK), and mouse anti-CD45 (Abcam, Cambridge, MA) antibodies, respectively, at the optimal dilutions according to the manufacturer's instructions. The antibody mixture was then incubated with the TMAs overnight at 4°C. Then DyLight 549 anti-mouse IgG (red) and DyLight 488 anti-rabbit IgG (green) (Vector laboratories, Burlingame, CA) were diluted (1∶200) and incubated with the TMAs for 1 hr at room temperature. Nuclei visualization was explored by DAPI counterstaining (blue). The TMAs were finally dehydrated in alcohol and coverslipped.
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