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7 protocols using af0227

1

Penile Tissue Immunohistochemistry

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After three washes with 0.01 mol/L PBS, the penis slices were cultured with 3% H2O2 (10 min). The primary antibodies against collagen 3 (1:200, AF5457, Affinity, China), Smad7 (1:200, AF5147, Affinity, China), elastase-2B (1:200, orb471854, Biorbyt, China), and osteopontin (1:200, AF0227, Affinity, China) were cultured with slices overnight at 4 °C, respectively. After PBS washes, the goat anti-rabbit IgG (H + L) secondary antibody (1:5000, #S0001, Affinity, China) was cultured with slices at 37 °C for 60 min. After staining with diaminobenzidine (DAB), the slices were dehydrated, purified and sealed with neutral gum. The results were observed and photographed with a light microscope.
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2

Proteomic Analysis of Urethral Tissue

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Based on a previously reported protocol [1 (link)], the dorsal neurovascular bundle and buck fascia were removed from the TA and urethra. The tissues and fibroblasts in each group were lysed in RIPA buffer (R0010, Solarbio, China). Twelve per cent SDS-PAGE was used to separate proteins (30 μg), and the separated proteins were transferred to PVDF membranes (EMD Millipore). Appropriate primary antibodies diluted with 5% BSA were incubated with the membranes overnight at 4 °C. The primary antibodies consisted of collagen 3 (1:800, AF5457, Affinity, China), Smad7 (1: 800, AF5147, Affinity, China), elastase-2B (1: 800, orb471854, Biorbyt, China), osteopontin (1: 800, AF0227, Affinity, China) and GAPDH (1:1000, BA2913, Boster, China). After 3 washes with TBS-0.01% Tween 20, the HRP-Affinipure goat anti-rabbit IgG (H + L) (1:500, BM3894, Boster, China) was incultured with the membranes for 2 h at 25 °C. After washing, the signals were visualized using enhanced chemiluminescence reagent (D085075, Bio-Rad, China).
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3

Osteogenic Differentiation of hBMSCs

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This experiment was grouped into control, US, HN-Ti3C2, and HN-Ti3C2+US groups. hBMSCs seeded on glass coverslips in 24-well plates were incubated for 14 or 21 days under the corresponding conditions according to the groups. The US and HN-Ti3C2+US groups were treated with US (1.0 MHz, 0.2 W/cm2, 50% duty cycle) every two days for 10 min each time, for a total of 4 times. Cells were washed and fixed with 4% paraformaldehyde for 30 min before permeabilized with 0.5%Triton x-100 for 15 min. After sealing with blocking solution for 30 min, alkaline phosphatase (ALP; rabbit source, DF6225) and OPN (Affinity, rabbit source, AF0227) antibodies diluted in the antibody diluent were added to the corresponding wells and incubated for 12 h at 4 °C. After discarding the antibody, the wells were washed three times with 0.1% PBST and then anti-rabbit antibody (red fluorescence) (Proteintech, SA00013-4) was added to each well and incubated in the dark for 1 h at room temperature. Anti-rabbit antibody was discarded, and the wells were washed again with 0.1% PBST before staining the cytoskeleton and nucleus. The cytoskeleton was stained with green fluorescence-labeled phalloidin solution (Yeasen, 40735ES75), and the nuclei were stained with DAPI solution (Beyotime, P0131). Fluorescence staining images were captured using a fluorescence microscope.
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4

Osteogenic Protein Expression Analysis

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The expression of osteogenesis-related protein OPN and Col-I was detected by immunofluorescence staining.(Yao et al., 2019b (link)). The BMSCs were cultured on the various microcarriers for 14 days, fixed with 4% PFA for 20 min at room temperature and then washed with PBS. The fixed cells were permeabilized with 0.25% Triton X-100 in PBS for 10 min and blocked with 5% bovine serum albumin (BSA) in PBST (0.25% Tween-20 in PBS). Next, primary anti-Col-I (1:200, AF7001, Affinity, United States) or anti-OPN (1:200, AF0227, Affinity, United States) was incubated overnight at 4°C on a shaking table. After being washed three times with PBS, the cells were exposed to the secondary antibody, goat anti-rabbit IgG (1:1,000, ab150077 Alexa Fluor®488, Abcam, United Kingdom) for 2 h at room temperature in dark. Finally, 4′,6-diamidino-2-phenylindole (DAPI; Sigma, United States) was used to stain the cell nuclei. Photos were taken on a laser confocal microscope (FV1000, Olympus, Tokyo, Japan).
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5

Protein Expression Analysis via Western Blot

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The BCA kit (pc0020, Solarbio, China) was utilized to quantify the protein isolated from cells, followed by being separated with the 12% SDS-PAGE. The separated protein was transferred from the gel to the PVDF membrane, which was further introduced with 5% skim milk. Then, the membrane was introduced with the primary antibody against PI3K (1:1000, AF6241, Affinity, USA), p-AKT (1:1000, AF0016, Affinity, USA), AKT (1:1000, AF6261, Affinity, USA), OPN (1:2000, AF0227, Affinity, USA), Twist (1:1000, AF4009, Affinity, USA), E-cadherin (1:2000, AF0131, Affinity, USA), N-cadherin (1:1000, AF4039, Affinity, USA), and GAPDH (1:10000, AF7021, Affinity, USA). The second antibody (1:6000, 7074, CST, USA) was subsequently added to be incubated for 90 min. Finally, ECL reagent was added to expose the bands, which were further quantified with the Image J software.
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6

Protein Expression Analysis of ADSCs

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After 14 days of osteogenesis or adipogenesis, the ADSCs were lysed with the RIPA cell lysate and protease inhibitor to extract the total protein. SDS-PAGE (Solarbio, China) was used to separate proteins with various molecular weights, and then, the separated proteins were blotted onto a PVDF membrane (Millipore, USA) using a transBlot turbo transfer system. After being sealed in 5% skimmed milk for 2 h, the membrane was incubated in the primary antibody overnight at 4 °C. The primary antibodies used are as follows: anti-COL1A1 AF7001, Affinity, USA, 1:1000), anti-ALP (DF6225, Affinity, USA, 1:1000), anti-OPN (AF0227, Affinity, USA, 1:2000), anti-BMP2 (AF5163, Affinity, USA, 1:1000), anti-RUNX2 (AF5185, Affinity, USA, 1:2000), anti-β-actin (AF7018, Affinity, USA, 1:10,000), anti-p-SMAD1/5/8 (AF8313, Affinity, USA, 1:2000), and anti-PPARγ (AF6284, Affinity, USA, 1:2000). Then, the membrane was incubated with the HRP-conjugated second antibody for 2 h and detected by ECL and super signal detection agents (Thermo Fisher Scientific, USA).
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7

Fibroblast Immunostaining Protocol

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Fibroblasts were fixed with 4% paraformaldehyde and washed as a standard protocol. After the cells were blocked with TBS-T containing 5% BSA for 60 min, they were incubated with antibodies against Smad7 (1:200, AF5147, Affinity, China), collagen3 (1:200, AF5457, Affinity, China), elastase-2B (1:200, orb471854, Biorbyt, China), and osteopontin (1:200, AF0227, Affinity, China) overnight at 4 ℃. Washing three washes with TBS-T, the fluorescein isothiocyanate-conjugated solution was added and incubated for 60 min. The nuclei of the cells were stained with 4′,6-diamidino-2-phenylindole (DAPI). A confocal microscope was used to observe the results.
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