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3 protocols using lysogeny broth broth

1

Synthesis of Mucin-Based Biosensors

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Mucin (from porcine stomach, Type III), 11-mercapto-1-undecanol, epichlorohydrin, diethylene glycol dimethyl ether, potassium chloride, potassium hexacyanoferrate (II) trihydrate, potassium ferricyanide (III), sodium phosphate, and d-mannose were purchased from Sigma-Aldrich (St. Louis, MO, USA). Absolute ethyl alcohol, sodium hydroxide, acetone, sulfuric acid, sodium acetate, acetic acid, and hydrogen peroxide were from DaeJung Chemicals & Metals Co., Ltd. (Gyeonggi-do, Korea). Carboxyfluorescein diacetate (CFDA) was obtained from Dojindo Molecular Technologies, Inc. (Rockville, MD, USA), and potassium phosphate from Pure Chemicals Co., Ltd. (Kyoto, Japan). Lysogeny broth (LB) broth and agar powder were purchased from BD (BD Difco, Lawrence, KS, USA).
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2

Bacterial Strain Cultivation and Preparation

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The bacterial strains used in this study are listed in Table 1. Each of these strains was grown in Lysogeny Broth (LB) broth (Difco BD, USA) overnight at 30 °C and 250 rpm. To examine the impact of the treatment by predatory bacteria or violacein, the bacterial culture were prepared by centrifuging with 2,200 × g for 10 min (5430 R, Eppendorf, USA) and resuspended in HEPES buffer (pH 7.2) to an optical density (OD) of 1.0 at 600 nm wavelength. B. bacteriovorus HD100 was cultured as described previously33 (link),34 .

Bacterial strains used in this study.

Bacterial StrainsCharacteristicsRef
S. aureus ATCC 25923
B. cereus ATCC 14579
S. epidermidis ATCC  14990
A. baumanniiClinical isolatePNUHa
E. coli MG1655Common lab strain; multidrug resistant
K. pneumoniaeClinical isolate; multidrug resistantPNUHa
S. aureus CCARM 3090Clinical isolate; multidrug resistant(18)b

aClinical strains isolated at the Pusan National University Hospital, Yangsan Campus. bObtained from the Culture Collection of Antimicrobial Resistant Microbes (http://knrrb.knrrc.or.kr/index.jsp?rrb=ccarm).

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3

Synthesis of Functionalized Metallic Nanoparticles

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Ready-made phosphate-buffered saline (PBS) solution, Lysogeny Broth (LB) broth (BD Biosciences, San Jose, CA, USA), and 3,3′,5,5′-tetramethylbenzidine (TMB) were purchased from Sigma-Aldrich (St Louis, MO, USA). Cetyltrimethylammonium bromide (CTAB), 3-mercaptopropyl trimethoxysilane (MPTMS), 3-aminopropyldimethyl-ethoxy silane (APDES), ammonium hydroxide (NH4OH; 28 wt% in water), silver nitrate (AgNO3), sodium borohydride (NaBH4), ascorbic acid, ethanol, hydrogen tetrachloroaurate(III) trihydrate (HAuCl4·3H2O), methanol, and sulfuric acid (H2SO4) were purchased from Sigma-Aldrich.
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