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7 protocols using mcp 1

1

Inflammatory Biomarkers in Serum and Synovial Fluid

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Serum (from whole blood) and joint fluid (from the right knee) were collected at the time of euthanasia and stored at −80°C until analysis. Quantification in serum was conducted using MCP-1 (ABclonal Science, Woburn, MA), TNF (R&D systems, Minneapolis, MN), and PGE2 analysis kits (ABclonal Science, Woburn, MA) in accordance with the manufacturer’s instructions. Adequate synovial fluid samples were available for TNF and PGE2, only. Technical triplicates were performed for each sample with each kit.
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2

Quantitative Western Blot Analysis

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Cells were lysed and total protein was estimated by using DC™ Protein Assay Kit (Bio‐Rad). Mice plasma was diluted with PBS in a ratio of 1:10 before gel separation. Proteins were resolved in 10% sodium dodecyl sulphate–polyacrylamide gel electrophoresis and transferred onto polyvinylidene fluoride membrane (Millipore). Membranes were incubated in 5% nonfat dry milk, followed by incubation with a primary and secondary antibody with three alternate wash. Blots were finally incubated with NBT and BCIP in alkaline phosphatase buffer until the bands were visible. The primary antibodies used for the study were anti‐vitronectin (1:1,000) (cat no. 45139; Abcam), anti‐transferrin (1:10,000) (cat no. Ab82411; Abcam), anti‐β‐actin (1:10,000) (cat. no. A5441; Sigma), anti‐ApoA2 (1:1000) (cat. no. A14690; Ab clonal), anti‐ApoA1 (1:1000) (cat no. sc‐376818; Santa Cruz), IL‐1β (1:1000) (cat no. sc‐52012; Santa Cruz), MCP‐1 (1:2000) (cat no. A7277; Ab clonal). Quantitative analysis was done by Image J software. The ratio of levels of experimental protein/loading control was used for the evaluation of relative levels of the protein.
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3

Histochemical and Immunohistochemical Analysis of Kidney and Lung Tissues

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The kidney and lung tissues that were preserved in aqueous formaldehyde solution for 24 h were dehydrated and embedded in paraffin blocks. The paraffin blocks were sliced at 4-μm thickness with a sliding microtome (SM2125, Leica Biosystems, Nussloch, Germany). For histochemical examinations, the specimens were deparaffinized in xylene and sequentially rehydrated using 100% ethanol, 90% ethanol, 70% ethanol, and water. To investigate pathological features of the kidneys, periodic acid Schiff (PAS) (Sigma/Merck, Darmstadt, Germany) staining was carried out to colorize brush borders and glomerular capillaries. To examine fibrosis, the specimens were subjected to Pico Sirius-red (Merck, Darmstadt, Germany) staining. The kidney specimens were immunohistochemically stained with TGF-β1 (Arigo Laboratories, Hsinchu, Taiwan), MCP-1 (ABclonal, Woburn, MA, USA), and IL-6 (ABclonal, Woburn, MA, USA) antibodies. The distributions of TGF-β1, IL-6, and MCP-1 in the kidneys were detected using commercially available peroxidase IHC kits, and developed with diaminobenzidine (DAB) (ThermoFisher, Waltham, MA, USA). The histochemical and immunohistochemical specimens were microscopically scanned and digitalized with a Pannoramic MIDI digital scanner (3DHISTECH Ltd., Budapest, Hungary). Microscopic photos were acquired using Pannoramic Viewer 1.14 (3DHISTECH Ltd., Budapest, Hungary).
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4

Kidney Protein Quantification and Analysis

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Kidney tissues were collected and homogenized in 1× RIPA buffer (ThermoFisher, Waltham, MA, USA) containing protease inhibitors and phosphatase inhibitors (Biotools, New Taipei City, Taiwan) with Dounce homogenizer. The protein concentration was determined using a Pierce BCA protein assay kit (ThermoFisher, Waltham, MA, USA). Total kidney proteins (30 μg) were migrated in SDS-PAGE and transferred to a PVDF membrane (Merck, Darmstadt, Germany). The membranes were blocked in 5% skim milk for 2 h in TBST buffer (20 mM Tris-Cl, 150 mM NaCl, 0.1% Tween 20, pH 7.4). After blocking, the membranes were probed with primary antibodies, including IL-6 (ABclonal, Woburn), MCP-1 (ABclonal, Woburn), TGF-β (Arigo Laboratories, Hsinchu, Taiwan), and β-actin (Abcam, London, UK) overnight. The desired protein bands were identified using horseradish peroxidase-conjugated secondary antibodies and developed with an enhanced chemiluminescence solution (ThermoFisher, Waltham, MA, USA). Immunoblot imaging was performed using a BioSpectrum AC Imaging System (Ultra-Violet Product Ltd., Cambridge, UK) to capture the protein band signals of immunoreactivity. The protein bands were quantified using ImageQuant software (GE-Healthcare, Marlborough, MA, USA) and digitally converted for statistical analysis.
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5

Antibody Sources for Western Blot and ChIP

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The sources of antibodies against the following proteins were: β-actin (A1978, 1:10,000 for WB) from Sigma; BMI1 (A0147, 1:1,000 for WB), Lamin B1 (A11495, 1:1000 for WB), MCP-1 (A7277, 1:1,000 for WB), p-p52-s392 (AP1137, 1:1,000 for WB) and p21 (A1483, 1:1,000 for WB) from ABclonal. RNA polymerase II (ab264350, 1:200 for ChIP), H3K4me3 (ab8580, 1:200 for ChIP) and H2AK119Ub (ab195467, 1:200 for ChIP) from abcam.
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6

Protein Quantification in Brain Tissues

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Brain tissues were ground to collect proteins. The cerebral levels of brain-derived neurotrophic factor (BDNF) (RK00433), TGF-β (RK00057), IL-1β (RK00006), IL-6 (RK00008), and monocyte chemoattractant protein-1 (MCP-1) (RK00381) were detected with commercial kits (ABclonal, Wuhan, China), following the instructions of the manufacturer.
Cultured BV2 cells were subjected to the 3 h incubation of VB (50 μM and 100 μM) and then 24 h stimulation of 1 μg/mL LPS. IL-1β (EK0394) as well as IL-6 (EK0411) levels in the cultured medium were detected with commercial kits (Boster, Wuhan, China) accordingly.
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7

Cytokine Profiling in BALF

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Bronchoalveolar lavage fluid (BALF) was centrifuged to obtain the supernatant. The expression of TNF-α, IL-1β, IL-6 and monocyte chemoattractant protein-1 (MCP-1) in the supernatant was measured by enzyme-linked immunosorbent assay (ELISA) kits [TNF-α (RK00029), IL-6 (RK00020), and IL-1β (RK00009) purchased from ABclonal Technology Co., Ltd. (Wuhan, China) and MCP-1 (SEKR0024) purchased from Beijing Solarbio Science & Technology Co., Ltd., (Beijing, China)] according to the manufacturers’ instructions.
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