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31 protocols using brain heart infusion

1

Antibacterial Effects of Honey

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The antibacterial effect of honey samples was determined on Pseudomonas aeruginosa ATCC 27853 and Staphylococcus aureus ATCC 25923. Test bacteria were grown in 100 mL BHI (Brain Heart Infusion, Sigma Aldrich Ltd., Hungary). Each bacteria were incubated in a shaker incubator (C25 Incubator Shaker, New Brunswick Scientific, Edison, New Jersey, United States) at 37°C and at a speed of 60 rpm for 12 h (41 (link)). The bacterial suspensions were diluted with clear BHI to the appropriate concentrations for each assay.
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2

Phenolic Acids Analysis in Chicory

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Protocatechuic, gallic, caffeic, 5‐caffeoylquinic, and chicoric acid were purchased from Chengdu Must Bio‐Technology Co., Ltd. Caftaric acid was from Extrasynthese (Genay Cedex, France). Solutions of standard phenolic acids were prepared in 50% methanol–water (volume/volume). ‐glucuronidase (EC 3.2.1.31, type IX A from E. coli), sulfatase (type H‐1 from helix pomatia, containing ‐glucuronidase), d‐saccharic acid 1,4‐lactone (a glucuronidase inhibitor), mycophenolic acid, and brain–heart infusion were purchased from Sigma. Chicory was from Hebei Vilof Agritech Co., Ltd, which were transported in a light‐proof foam box with a cold supply chain and consumed by the subjects in 24–36 hr after harvest.
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3

Culturing Clostridium difficile 630 Strains

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The bacterial strains and plasmids used in this study are listed in Table S1 in the supplemental material. C. difficile 630 strains were routinely cultured in brain heart infusion (Sigma-Aldrich) medium supplemented with yeast extract (BHIS) containing appropriate antibiotics (2-10 μg/mL thiamphenicol, 250 μg/mL d-cycloserine, or 8 μg/mL cefoxitin) or in 70:30 sporulation medium that contained 70% SMC (90 g Bacto peptone, 5 g protease peptone, 1 g ammonium sulfate, 1.5 g Tris base, and 15 g agar per L) and 30% BHIS (59 (link)). Taurocholate (TA) was added to a final concentration of 0.1%, where indicated, as a germinant. To induce expression of cd1688 in the complement strains, 0.1% xylose was added to growth media where indicated. C. difficile was cultured in an anaerobic chamber (Coy Laboratory Products) at 37°C with an atmosphere of 3.5% H2 and 5 to 8% CO2 and balanced with N2 (60 (link)). Escherichia coli strains were grown at 37°C in Luria-Bertani media (LB) with antibiotics as necessary (20 μg/mL chloramphenicol or 50 μg/mL kanamycin).
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4

Streptococcal Adherence Experiment

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In terms of streptococcal species, S. sanguinis ATCC 10556 (ATCC, American Type Culture Collection), S. gordonii ATCC 10558, S. oralis ATCC 35037, and S. mutans ATCC 25175 were used. The bacteria were grown on plates containing Brain heart infusion (BHI; Sigma-Aldrich) and 1.5% agar (Wako) for plate cultures. Pre-culture was performed in an anaerobic chamber (N2: 80%; H2: 10%; CO2: 10%) at 37°C for 1 day. A single colony on the plate was cultured in BHI broth for further 24 h. A fresh culture, following liquid culture for another 4 hours, was used for the adherence experiment. The optical density of every bacterial suspension was regulated with BHI broth to 0.2 at 660 nm by a spectrophotometer (Ultrospec 2100pro; Amersham Biosciences). The bacteria for subsequent experiments were grown on disks in 24-well plates.
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5

Listeria monocytogenes Growth Potential Assessment

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A suspension of two different strains was used as inoculum, composed by the reference strain ATCC 7644 and the EURL strain 12M0B098LM (Guillier, Lardeux, Michelon, & Ng, 2013). The preparation of the inoculum was done following the European Reference Laboratory for L. monocytogenes guideline (EURL, 2014) with some modifications (concentration of the inoculum and use of a mix of two L. monocytogenes strains). The challenge test was initially carried out to assess the growth potential, and then, it seemed more interesting to calculate the maximum growth rate, knowing that the use of two L. monocytogenes strains, instead of one, would not have influenced the result of the study. The strains, stored in Microbank™ (Pro‐Lab Diagnostics) at −80°C, were individually revitalized at 37 ± 1°C for 18h in BHI broth (Brain Heart Infusion, Sigma‐Aldrich Co. LLC.). In order to get adapted to the storage temperature of the product, new subcultures were set up in BHI broth and incubated at 8 ± 1°C and 12 ± 1°C until reaching the stationary phase of each bacterial strain (EURL, 2014; NACMCF, 2010). The inoculum suspension was then prepared, consisting of equal parts of liquid cultures of the two selected strains. The mixture was enumerated according to ISO 11290‐2:1988/Amd. 1:2004. The suspension was subsequently diluted (saline water) to obtain a concentration of 103 CFU/g in the product.
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6

Cultivation of Listeria monocytogenes Strains

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Two reference strains of L. m. were selected for this study: L. m. ATCC 7644 and L. m. EURL 12MOB098LM isolated from dairy product. Culture of two strains were prepared inoculating 50 mL of BHI (Brain Heart Infusion, Sigma-Aldrich Co. LLC., St. Louis, MO, USA) into broth and adapting by incubating at selected temperature of 12±1°C. The cultures were allowed to growth until exponential phase and concentration adjusted to reach a final concentration of about Log10 8 CFU mL-1.
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7

Anaerobic Culture of Bacteroides Species

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B. thetaiotaomicron VPI-5482 and B. ovatus ATCC 8483 were cultured anaerobically in TYG medium, brain-heart infusion (Sigma) plus 2% (w/v) agar or minimal medium containing 0.5% (w/v) 1,6-β-glucan (Elicityl Oligotech) or glucose as sole carbon source, as described previously (2 (link)).
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8

S. mutans Biofilm Growth and Characterization

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S. mutans UA159 (ATCC 700610) biofilms were grown for 72 h on glass microscope slides at 37°C and 5% CO2 in brain heart infusion (Sigma-Aldrich, St. Louis, MO) supplemented with 2% (wt/vol) sucrose (Sigma-Aldrich) and 1% (wt/vol) porcine gastric mucin (type II; Sigma-Aldrich). After the growth period, the biofilm-covered slides were gently rinsed in 1% (wt/vol) phosphate-buffered saline solution (Sigma-Aldrich) and placed in petri dishes (49 ). Biofilm thickness was determined by fixing untreated samples with 4% (wt/vol) paraformaldehyde and staining with Syto 63 (Thermo Fisher Scientific, UK). Subsequently, three random confocal images were taken on three independent replicate biofilm slides, with a thickness of 51.8 ± 4.9 μm measured using COMSTAT software; thus, we used a biofilm thickness (Lb) of 55 μm in the simulations.
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9

Antibacterial and Anti-QS Effects of Honey

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The antibacterial effect of honey samples was determined on Pseudomonas aeruginosa ATCC 27853, Staphylococcus epidermidis ATCC 12228 and methicillin-resistant Staphylococcus aureus ATCC 700698. Test bacteria were grown in 100 mL sterile BHI (Brain Heart Infusion, Sigma Aldrich Ltd., Budapest, Hungary), except for the MIC determination, in which case Mueller-Hinton Broth (MHB, Oxoid Ltd., London, UK) culture medium was used. Each bacterium was incubated in a shaker incubator (C25 Incubator Shaker, New Brunswick Scientific, Edison, NJ, USA) at 37 °C and at a speed of 60 rpm for 12 h [40 ]. The bacterial suspensions were diluted with clear BHI to the appropriate concentrations for each assay. For the anti-QS tests, the Chromobacterium violaceum 85WT (SZMC 6269) bacterial strain was used. The bacterium was cultivated on LB agar (Luria Bertani Broth, 10 g tryptone, 10 g NaCl, 6.6 g yeast extract, 15 g agar in 1000 mL distilled water, Sigma Aldrich Ltd., Budapest, Hungary) at 30 °C for 48 h.
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10

Oral Gavage of Porphyromonas gingivalis in Mice

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Pg was cultured in broth (Brain Heart Infusion, l-cysteine hydrochloride monohydrate, yeast extract, and chloroproto-ferriheme, Sigma-Aldrich, St. Louis, MO, USA). After that, Pg was placed in an anaerobic container for 48 h at 37 °C. A total of 109 colony-forming units of live Pg was suspended in 0.1 ml phosphate-buffered saline (PBS) with 2% carboxymethyl cellulose (CMC) (Sigma-Aldrich) and given to each mouse by gavage three times a week for about a month, as described previously [14 , 15 (link)]. The control group was administered 0.1 ml PBS with 2% CMC without Pg. After administration, all mice were allowed to eat and drink ad libitum.
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