All RAMS were transported on ice to the laboratory of UGent, stored overnight at 4 °C, and homogenized in 25 mL of
maximum recovery diluent (Oxoid, Dilbeek, Belgium) by stomaching [20 (
link)]. At ULiège, the whole procedure to isolate EPEC and (AE-)STEC was slightly adapted from Thiry and collaborators [17 (
link)].
Briefly, 100 µL of the suspension was added to 5 mL of lauryl sulfate broth (Sigma-Aldrich, Darmstadt, Germany) and incubated overnight at 37 °C. Bacterial DNA was extracted from 1.5 mL of the enrichment broths via the alkaline-boiling method and stored at −20 °C. Lysates were tested with a triplex PCR targeting the
eae,
stx1, and
stx2 genes [21 (
link)]. Each PCR-positive broth was subsequently streaked onto four (semi-)selective agar plates and incubated overnight at 37 °C: McConkey’s (MC),
Chromocult Coliform ES (ES) (VWR, Leuven, Belgium),
Chromocult Coliform ES supplemented with 2.5 mg/mL of potassium tellurite (ESTe) (Sigma-Aldrich, Darmstadt, Germany) [22 (
link)], and supplemented CHROMagarTM STEC base (STECB) (I2A, Montpellier, France).
Habets A., Engelen F., Duprez J.N., Devleesschauwer B., Heyndrickx M., De Zutter L., Thiry D., Cox E, & Mainil J. (2020). Identification of Shigatoxigenic and Enteropathogenic Escherichia coli Serotypes in Healthy Young Dairy Calves in Belgium by Recto-Anal Mucosal Swabbing. Veterinary Sciences, 7(4), 167.