The largest database of trusted experimental protocols

12 protocols using fluorescein isothiocyanate conjugated secondary antibody

1

Immunofluorescence and Western Blot Analysis of TAZ

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were fixed with 4% paraformaldehyde, permeabilized with 0.1% Triton X-100/PBS, blocked in 2% BSA/PBS and probed with primary antibody against TAZ (1:200, Cell Signaling Technology, Inc.), followed by incubation with fluorescein isothiocyanate-conjugated secondary antibodies (1:100, Sigma). Nuclei were stained with DAPI. All immunofluorescence was visualized by confocal microscopy (LSM 700), and images were processed using Volocity software (PerkinElmer Life Sciences). Images were quantitated using Image J software. For western blot analysis, 20 μg of whole-cell lysates and nuclear fractions were used. Nitrocellulose membranes were incubated with antibodies against TAZ, E-cadherin (1:200, Cell Signaling Technology, Inc.), Vimentin (1:200, abcam), CTGF (1:200, Proteintech Group, Inc.), AXL (1:200, abcam), tAKT, pAKT, tERK and pERK (1:100, Cell Signaling Technology, Inc.), GAPDH (1:5000, Santa Cruz Biotechnology) and histone H3 (1:2000, abcam) followed by horseradish peroxidase-linked secondary antibody. The target protein was visualized by chemiluminescence (Denville Scientific, Metuchen, NJ).
+ Open protocol
+ Expand
2

Western Blot and Immunofluorescence Assays

Check if the same lab product or an alternative is used in the 5 most similar protocols
Whole cell lysates were prepared as previously described (19 (link),20 (link)). For western blot analysis, 30 µg whole protein lysates were used to detect the indicated protein. For the immunofluorescence assay, the cells on a cover glass were fixed and incubated with primary antibodies followed by Texas Red (cat. no. SAB3700022; Sigma-Aldrich, Darmstadt, Germany) or fluorescein isothiocyanate-conjugated secondary antibodies (cat. no. PA1-85440; Thermo Fisher Scientific, Inc., Waltham, MA, USA). Nuclei were stained with Hoechst 33258 nuclear staining dye. Coverslips were washed, mounted and then analyzed using a fluorescence microscope.
+ Open protocol
+ Expand
3

Quantifying Insulin Content in MIN6 Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Immediately after the GSIS assay, the insulin content in MIN6 cells (2×105 cells/well) was also detected using immunofluorescence staining. Briefly, cells were fixed with a freshly prepared solution of 4% paraformaldehyde for 20 min at room temperature, followed by permeabilization with 0.1% Triton X-100 for 10 min. After blocking with PBS-Tween-3% bovine serum albumin (Sigma-Aldrich; Merck KGaA) for 1 h, cells were incubated with a primary antibody against insulin (cat. no. I2018; 1:200; Sigma-Aldrich; Merck KGaA) overnight at 4°C and then incubated with a fluorescein isothiocyanate-conjugated secondary antibody (cat. no. 711-545-1500; 1:200; Jackson ImmunoResearch Laboratories, Inc.) for 1 h, followed by nuclear staining with DAPI. Images of the immunofluorescence staining were captured with a fluorescence microscope (Carl Zeiss AG).
+ Open protocol
+ Expand
4

Immunofluorescence Analysis of Caspase-3 in Heart Tissue

Check if the same lab product or an alternative is used in the 5 most similar protocols
For the immunofluorescence, heart tissues were fixed in a 10% buffered formaldehyde solution and embedded in paraffin. Paraffin was removed using a xylene wash, then heat-induced antigen retrieval was performed. The sections were then blocked with a 10% goat serum in phosphate-buffered saline for 1 h. The primary antibody anti-caspase-3 (1:200) (Santa Cruz Biotechnology, Santa Cruz, CA, USA) was incubated overnight at 4 °C. The sections were then incubated with a fluorescein-isothiocyanate-conjugated secondary antibody (1:500) (Sigma-Aldrich, St. Louis, MO, USA). Samples were visualized with a fluorescence microscope at 400× magnification (CIA-102; Olympus, Tokyo, Japan).
+ Open protocol
+ Expand
5

GLUT-1 Expression in Tumor Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
To document changes at tissue level in the expression of GLUT-1, sections of tumors from all experimental groups were exposed to immunofluorescent labeling using mouse monoclonal anti–GLUT-1 antibody (AbCam) followed by fluorescein isothiocyanate–conjugated secondary antibody (Sigma-Aldrich). Neoplastic expression of GLUT-1 was ascertained by the simultaneous detection of CD44. Briefly, GLUT-1-stained sections were incubated with rat monoclonal anti-CD44 antibody (HCAM-IM7, Santa Cruz Biotechnology, Dallas, TX) followed by specific Cy3-conjugated secondary antibody (1:50 Jackson ImmunoResearch Laboratories, West Grove, PA). Nuclei were counterstained with 4,6-diamino-2-phenylindole (DAPI). On sections from each experimental group, images of representative microscopic fields covering a tissue area of a minimum of 9.6mm2 to a maximum of 12.4mm2 were acquired with precalibrated gain and exposure time at 100x magnification using a fluorescence microscope (Olympus BX60).
The fractional area occupied by GLUT-1pos/CD44pos cells was evaluated by computing fluorescent signals using a software for image analysis (Image Pro Plus 4.0, Media Cybernetics, Inc., USA).
+ Open protocol
+ Expand
6

Immunofluorescence Imaging of Caspase-3

Check if the same lab product or an alternative is used in the 5 most similar protocols
For immunofluorescence, tissues were fixed in 10% buffered formaldehyde solution and embedded in paraffin. Sections underwent microwave antigen retrieval, were blocked with 10% serum in phosphate-buffered saline, and were incubated with anti-caspase-3 (1:200) (Santa Cruz Biotechnology, Santa Cruz, CA, USA). Binding sites of the primary antibody was revealed using a fluorescein isothiocyanate-conjugated secondary antibody (1:500) (Sigma–Aldrich, St. Louis, MO, USA). Samples were visualized with a fluorescence microscope at 400× magnification (CIA-102; Olympus).
+ Open protocol
+ Expand
7

Immunofluorescence Assay for Caspase-3 Detection

Check if the same lab product or an alternative is used in the 5 most similar protocols
For immunofluorescence assay, tissues were fixed in 10% buffered formaldehyde solution and embedded in paraffin. Sections were underwent microwave antigen retrieval, blocked with 10% goat serum in phosphate buffer saline, and incubated with polyclonal rabbit anti-caspase-3 antibody (Cell Signaling Technology). The primary antibody bound sites were visualized with fluorescein isothiocyanate conjugated secondary antibody (Sigma Aldrich) for a fluorescence microscopic observation at 400x magnification (CIA-102, Olympus, Tokyo, Japan) [3 (link), 21 (link)].
+ Open protocol
+ Expand
8

Quantification of DNA Damage Biomarker γH2AX

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were trypsinized, washed with ice-cold PBS, and fixed at a concentration of 2 × 106 cells/mL in ice-cold 70% ethanol. For γH2AX analysis, samples were incubated with a mouse anti–γH2AX-specific antibody (clone JBW301; Millipore, Burlington, MA, USA) overnight at 4 °C, followed by incubation with a fluorescein isothiocyanate–conjugated secondary antibody (Sigma-Aldrich), as previously described [37 (link)]. For quantification of γH2AX positivity, a gate was arbitrarily set on the control, untreated sample to define a region of positive staining for γH2AX of approximately 5%. This gate was then overlaid on the treated samples. Samples were stained with propidium iodide to measure total DNA content and analyzed on a FACScan flow cytometer (Becton Dickinson, Franklin Lakes, NJ, USA) with FlowJo software (Tree Star, Ashland, OR, USA).
+ Open protocol
+ Expand
9

Cell Fixation and Histone Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were trypsinized, washed with ice-cold PBS, and fixed at a concentration of 2 × 106 cells/ml in ice-cold 70% ethanol. For pHistone H3 analysis, cells were incubated with a rabbit anti-pHistone H3 (S10) antibody (Millipore) as previously described [32] (link). For γH2AX analysis, samples were incubated with a mouse anti–γH2AX-specific antibody (clone JBW301; Millipore) overnight at 4°C followed by incubation with a fluorescein isothiocyanate–conjugated secondary antibody (Sigma) as previously described [33] (link). For quantification of γH2AX positivity, a gate was arbitrarily set on the control, untreated sample to define a region of positive staining for γH2AX of approximately 5%. This gate was then overlaid on the treated samples. Samples for both analyses were stained with propidium iodide to measure total DNA content and analyzed on a FACScan flow cytometer (Becton Dickinson) with FlowJo software (Tree Star).
+ Open protocol
+ Expand
10

Immunofluorescence Staining of Anguilla anguilla Agglutinin

Check if the same lab product or an alternative is used in the 5 most similar protocols

Anguilla anguilla agglutinin (AAA; Sigma-Aldrich) was Cy3 labelled using Cy3 monofunctional reactive dye (Amersham Bioscience). Immunofluorescence staining was performed as described previously (Mimuro et al. 2007). For PCNA staining, acetone-fixed sections were stained with anti-PCNA antibody (Santa Cruz, sc-56, 1:50 dilution) after epitope retrieval by heating in citrate buffer (10 mM sodium citrate buffer (pH 6.0)). Fluorescein Isothiocyanate-conjugated secondary antibody (Sigma, F2012, 1:100 dilution) was used to visualize mouse antibody. Cy3-labelled AAA was used to visualize pit cells. The stined specimens were examined with a confocal laser-scanning microscope (LSM510; Carl Zeiss) equipped with LSM510 version 3.2 software (Carl Zeiss).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!