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6 protocols using rat anti pdgfrα

1

Antibodies for Immunohistochemistry and Western Blot

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The following primary antibodies were used for IHC or western blot analyses: mouse anti-GPR56 (H11) (1:200)40 (link) and rabbit anti-GPR56 (199) (1:200)19 (link), rabbit anti-MBP (Millipore; Cat #AB980, 1:200), rat anti-MBP (Abcam, Cat# ab7349), mouse anti-O4 (Millipore; Cat #MAB345, 1:400), rabbit anti-NG2 (Millipore; Cat #AB5320, 1:200), goat anti-Sox2 (Santa Cruz; Cat #sc-17320, 1:400), rabbit anti-Olig2 (kind gift from Charles Stiles, 1:10,000), rat anti-PDGFRα (BD Bioscience; Cat #558774, 1:500), rabbit anti-PDGFRα (Cell Signaling Technologies; Cat #3164S, 1:500) and rat anti-Ki67 (Affymetrix eBioscience; Cat #14-5698-80, 1:100), rat anti-BrdU (Accurate Chemical and Scientific Corporation; Cat #OBT0030S, 1:100), rabbit anit-PLP (Abcam, Cat #ab28486, 1:1,000), mouse anti-RhoA (Cytoskeleton, Cat# ARH03-A, 1:500), mouse anti-CDK2 (Santa Cruz; Cat #sc-6248, 1:1,000), mouse anti-β-actin (Sigma, Cat #A5044, 1:5,000) and mouse anti-Ki67 (BD Bioscience; Cat #550609, 1:100). Secondary antibodies were goat anti-mouse or anti-rat conjugated with either Alexa 488 (Life Technologies, 1:1,000) or Alexa 546 (Life Technologies, 1:1,000) and goat anti-rabbit conjugated with Alexa 546 or 555 (Life Technologies, 1:1,000), goat anti mouse or rabbit IgG-HRP (Sigma, Cat# A4416 or A6154, 1:3,000).
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2

Immunofluorescence Staining of Vibratome Sections

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Free-floating vibratome sections were blocked with 10% donkey serum and 0.2% Triton-X in 1X PBS for 2 h at RT. After 2 h, the blocking solution was removed and sections were incubated with primary antibodies in 10% donkey serum in 1X PBS for 1 h at RT, and then washed at RT with 1X PBS three times for 5 min each. After washing, sections were incubated with secondary antibodies in 10% donkey serum in 1X PBS for 1 h at RT, and then washed again with 1X PBS three times for 5 min each. Sections were mounted on slides with ProLong Diamond Antifade Mountant (Invitrogen). Images were captured using a LSM780 Zeiss laser-scanning confocal microscope. Antibodies used for immunostaining were as follows: rabbit anti-Olig2 (1:500; Millipore, RRID:AB_2299035), goat anti-Sox10 (1:200; Santa Cruz, RRID:AB_22553119), rat anti-PDGFRα (1:500; BD Pharmingen; RRID:AB_397117), mouse anti-CC1 (1:500; Millipore, RRID:AB_2057371), chicken antβ-gal (1:2000; Abcam; RRID:AB_307210), mouse anti-Ki67 (1:250; BD Pharmingen; RRID:AB_393778). Donkey secondary antibodies conjugated to Alexa Fluor 488, Rhodamine Red-X, or Alexa Fluor 647 were purchased from Jackson ImmunoResearch and used at 1:500.
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3

Comprehensive Immunostaining Protocol

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Primary antibodies: mouse IgG2a anti-AnkyrinG (clone N106/36; 1:100), mouse IgG2b anti-AnkyrinG (clone N106/65; 1:75), and mouse IgG1 anti-Caspr (1:100), all from Neuromab; mouse IgG1 anti-Pan Nav (clone K58/35; 1:150; Sigma); mouse anti-Calbindin (1:500; Sigma), rabbit anti-Calbindin (1:300; Swant), rabbit anti-Caspr (1:300; Abcam), rat anti-PLP (1:10; kindly provided by Dr. K. Ikenaka, Okasaki, Japan), mouse IgG2b anti-MBP (1:200; SMI99, Sigma), rabbit IgG anti-Iba1 (1:500; Wako), chicken anti-GFAP (1:500; Aves Labs), rat anti-PDGFrα (1:100; BD Biosciences), rabbit IgG anti-TMEM119 (1:100; Sigma), rabbit IgG anti-P2Y12r (1:300; Alomone, human tissue), rabbit anti-P2Y12R (1:300; Anaspec, mouse tissue), chicken anti-GFP (1:250; Millipore), mouse IgG2a anti-iNOS (1:100; BD Biosciences), goat anti-IGF1 (1:50; R&D System), and chicken anti-mCherry (1:1000; Abcam). Secondary antibodies corresponded to goat or donkey anti-chicken, goat, mouse IgG2a, IgG2b, IgG1, rabbit and rat coupled to Alexa Fluor 488, 594, 647, or 405 from Invitrogen (1:500), or goat anti-mouse IgG1 DyLight from Jackson Immuno Research (1:600).
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4

Transcription and Protein Expression Analysis

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Simple or double in situ hybridization and immunofluorescent staining were performed on transverse sections as previously reported (Touahri et al., 2012; Ventéo et al., 2012). Digoxigenin‐ or Fluorescein‐labeled antisens RNA probes for sulf2, aldh1L1, fgfr3, sox10, and tenascin‐C were synthesized using DIG‐ or Fluorescein‐labelling kit (Roche) according to the manufacturer's instructions and revealed using either NBT/BCIP (Roche), INT/BCIP (Roche) or Alexa‐fluor 488 Tyramide (Molecular Probes). Antibodies used in this study were as follows: goat anti‐AldoC (Santa Cruz Biotechnology), rabbit and mouse anti‐GFAP (DAKO), rabbit anti‐NFIA (Active Motif), rabbit and goat anti‐Olig2 (Millipore and R&D Systems), goat anti‐Olig1 (R&D Systems), goat anti‐Sox10 (Santa Cruz Biotechnology), rat anti‐PDGFRα (BD Pharmingen), rabbit anti‐Zeb1 (Novus), mouse anti‐Nkx6.1 (Hybridoma Bank), mouse anti‐Cx43 (BD Biosciences) and rabbit anti‐Cx30 (Thermo Fisher Scientific). Alexa Fluor‐594‐ or Alexa Fluor‐488 or Alexa Fluor‐647‐conjugated secondary antibodies (Thermo Fisher Scientific) were used.
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5

Immunopanning for Cell Type Isolation

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Immunopanning experiment was carried out as previously described with some modifications (Foo, 2013 (link)). The rat or mouse brain was minced and digested with 1 mg/mL papain at 37°C for 1 h. After the cessation of digestion by ovomucoid (Worthington, LS003086), the resulting cell suspension was incubated with primary antibodies [astrocyte, mouse anti-ITGB5 (Invitrogen, 14–0497-82); OPC, rat anti-PDGFRα (BD Biosciences, 558774); OL, mouse anti-PLP (Millipore, MAB388); mouse microglia, rat anti-CD45 (BD, 550539); neuron, rabbit anti-p75 (Abcam, EP1039Y)] diluted in the panning buffer for 30 min at room temperature. The cell suspension was then transferred to a series of secondary antibodies coated 10-cm dishes, and incubated for 30 min. After attachment of the target cell types to the dish, the remnant cell suspension was removed, and the dish was washed with the panning buffer thrice. The cells were then collected with RIPA buffer and subjected to proteomic analysis.
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6

Immunofluorescence Staining of Cells and Brain Tissue

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Cell culture on coverslip were fixed with 4% PFA for 8min
and quenched with 10mM Glycine for 30min and then blocked in blocking buffer
(0.02% Triton X-100 and 5% normal donkey serum in PBS) for
20min and incubate with primary antibodies for 40min at room temperature.
Cryosections (12-μm thick) or vibratome sections (50-μm
thick) were permeabilized and blocked in blocking buffer (0.3%
Triton X-100 and 5% normal donkey serum in PBS) for 1 h at room
temperature and overlaid with primary antibodies overnight at 4 °C.
Antibodies used in the study were: rabbit anti-Olig2 (Millipore, AB9610),
rat anti-PDGFRα (BD Bioscience, 558774), mouse anti-APC (CC1,
Oncogene Research, OP80), goat anti-MBP (Santa Cruz Biotechnology,
sc-13914), rabbit anti-CHD8 (Abcam, ab84527), rabbit anti-GFAP (Invitrogen,
#13-0300), rabbit anti-cleaved caspase 3 (Cell Signaling Technology,
#9661), rabbit anti-GFP (Molecular Probes, #A-11122), Rabbit
Monoclonal anti-Sox10 (Abcam, ab180862), mouse anti-NeuN (Millipore,
MAB377). After washing with 0.2% Triton X-100 in PBS, cells or brain
sections were incubated with secondary antibodies conjugated to Cy2, Cy3 or
Cy5 (Jackson ImmunoResearch Laboratories) for 2 h at room temperature,
stained in DAPI for 5 min, washed in PBS and mounted with Fluoromount-G
(SouthernBiotech). Cell counting was carried out in a double-blind
manner.
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