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One step rt pcr universal master mix reagent

Manufactured by Thermo Fisher Scientific

One‐Step RT‐PCR Universal Master Mix reagent is a ready‐to‐use solution that enables reverse transcription and PCR amplification in a single step. It contains the necessary components for both processes, including reverse transcriptase and DNA polymerase enzymes.

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3 protocols using one step rt pcr universal master mix reagent

1

Quantitative RT-PCR Analysis of Gene Expression

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Total RNA was isolated from tissues and cells using the RNeasy Mini Kit and RNase‐Free DNase Kit (Qiagen, Valencia, CA) according to the manufacturer's instructions with the deoxyribonuclease treatment performed on the column. RNA purity and yield were assessed by evaluating the A260/A280 ratio and concentration using the NanoDrop One Spectrophotometer (ThermoFisher Scientific, Waltham, MA). The One‐Step RT‐PCR Universal Master Mix reagent (ThermoFisher Scientific) was used to quantify mRNA levels of the selected target genes. Quantitative real‐time polymerase chain reaction (PCR) was performed with the CFX96 Real‐Time System C1000 Touch Thermal Cycler (Bio‐Rad, Hercules, CA) using predesigned primer–probe sets (ThermoFisher Scientific) for 5‐HTR2B (Mm00434123_m1), SLC25A4 (solute carrier family 25), also known as ANT‐1 (adenine nucleotide translocase 1; Mm01207393_m1), and the reference gene PPIB (peptidylprolyl isomerase B; Mm00478295_m1) in a 10‐μL reaction volume. The thermocycling parameters for each reaction were 48 ℃ for 30 minutes and 95 ℃ for 10 minutes followed by 40 cycles of 95 ℃ for 15 seconds and 60 ℃ for 60 seconds. Values measured for each primer/probe set were normalized to PPIB.
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2

Quantitative RT-PCR Analysis of Mouse Uterine Gene Expression

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Total RNA was extracted from the whole mouse uterus using the Qiagen RNeasy mini kit (Qiagen, Valencia, CA) according to the manufacturer’s protocol with the deoxyribonuclease (DNase) treatment performed on the column. RNA purity and yield was assessed be evaluating the A260/A280 and concentration using the NanoDrop One Spectrophotometer (ThermoFisher Scientific, Waltham, MA). One hundred nanograms total RNA was used to synthesize cDNA using the One-Step RT-PCR Universal Master Mix reagent (ThermoFisher Scientific). Quantitative real-time polymerase chain reaction (qRT-PCR) was performed with the CFX Connect or CFX384 thermocycler (BioRad) using predesigned primer–probe sets (see Table S1) (ThermoFisher Scientific) in a 10-μL reaction volume. The thermocycling parameters for each reaction were 48°C for 30 min, 95°C for 10 min, followed by 40 cycles of 95°C for 15 s and 60°C for 60 s. Each gene primer–probe set was evaluated in technical duplicates from a standard curve and normalized to that of the reference gene peptidylprolyl isomerase B (PPIB), which was unaffected by treatment. Data are reported as fold change, and analyzed by ANOVA or Student’s t-test using three to five biological replicates per treatment group.
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3

Analyzing Gene Expression in Tissues

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Total RNA was isolated from tissues and cells using the RNeasy Mini Kit and RNase-Free DNase Kit (Qiagen, Valencia, CA, USA) according to the manufacturer’s instructions, with deoxyribonuclease (DNase) treatment performed on the column. RNA purity and yield were assessed by evaluating the A260/A280 ratio and concentration using a NanoDrop One Spectrophotometer (Thermo Fisher Scientific, Waltham, MA, USA). The One-Step RT–PCR Universal Master Mix reagent (Thermo Fisher Scientific) was used to quantify the target gene mRNA levels. Quantitative real-time polymerase chain reaction (qRT–PCR) was performed with the CFX96 Real-Time System C1000 Touch Thermal Cycler (Bio-Rad) using predesigned primer–probe sets (Thermo Fisher Scientific) for β-myosin heavy chain (β-Mhc) (Myh7b, Mm01249941_m1), skeletal muscle α-actin (Ska) (Acta1, Mm00808218_g1), brain natriuretic peptide (Nppb) (Mm01255770_g1), interleukin-6 (Il-6) (Mm00446190_m1), lipocalin 2 (Lcn-2) (Mm01324470_m1), prostaglandin-endoperoxide synthase 2 (Ptgs2) (Mm00478374_m1), and the reference gene peptidylprolyl isomerase B (PPIB). The thermocycling parameters for each reaction were 48 °C for 30 min and 95 °C for 10 min, followed by 40 cycles of 95 °C for 15 s and 60 °C for 60 s. Values measured for each primer–probe set were normalized to PPIB.
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