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6 protocols using anti ire1α

1

Protein Immunoblotting of ER Stress Markers

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Protein, 20–30 µg, was separated by electrophoresis on 10–12% SDS-polyacrylamide gels at 60–100 mV and then transferred onto polyvinylidene fluoride (PVDF) membranes for 90 min on constant 200 mA at 4 °C. After protein transfer, membranes were blocked in 5% BSA + Tris-buffered saline plus Tween-20 (TBST) blocking buffer for an hour, then incubated with the respective primary antibodies overnight at 4 °C. Following 3 washes with TBST, the membranes were incubated with horseradish peroxidase (HRP)-conjugated anti-rabbit IgG (Promega,#W401B, Madison, WI, USA) or HRP-conjugated anti-mouse IgG secondary antibodies (BioRad, #170-6516, Mississauga, ON, Canada) (1:5000) for 1 h at room temperature. Signals were detected using ECL plus kit reagents (Perkin Elmer, Guelph, ON, Canada) on a Chem Doc imager (BioRad, Mississauga, ON, Canada). Primary antibodies used were: Anti-Caspase-12 (Abcam, #ab62484, Toronto, ON, Canada); Anti-KDEL (Abcam, #ab176333, Toronto, ON, Canada), which recognizes GRP94, GRP78, and PDI; Anti-XBP1(Abcam, #ab37152, Toronto, ON, Canada); Anti-ATF6 (Proteintech, #24169-1-AP, Rosemont, IL, USA); Anti-PERK (Proteintech, #20582-1-AP, Rosemont, IL, USA); Anti-IRE1α (Proteintech, #27582-1-AP, Rosemont, IL, USA).
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2

Comprehensive Protein Expression Analysis

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Total ovary lysates were separated on SDS-PAGE. After electrophoresis, the protein was transferred to PVDF membrane. The membranes were blocked with 5% skimmed milk and incubated with anti-GRP78 (1:1000, #11587–1-AP, Proteintech, Hubei, China), anti-PARP1 (1:4000, #66520-1-lg, Proteintech), anti-PAR (1:1000, #4335-MC-100, Bio-techne, Minneapolis, USA), anti-mTOR (1:1000, #20657-1-AP, Proteintech), anti-p-mTOR (1:800, #sc-293133, Santa cruz, Dallas, Texas, USA), anti-KitL (1:1000, #bs-0545R, Biorbyt, Hubei, China), anti-p-IRE1α (1:800#, bs-16698R, Biorbyt), anti-IRE1α (1:1000, #27528-1-AP, Proteintech), anti-ATF4 (1:1000, #10835-1-AP, Proteintech), anti-p-PERK (1:800, #Orb336657, Biorbyt), anti-PERK (1:1000, #24390-1-AP, Proteintech), anti-HA-tag (1:1000, #30701ES60, YEASEN), anti-FLAG-tag (1:1000, #30501ES60, YEASEN) and anti-GAPDH (1:4000, #ab8245, Abcam, Cambridge, UK) antibodies overnight at 4 °C. After TBST washing, the membranes were treated with the corresponding peroxidase-conjugated secondary antibody, and then the signal was detected with an Enhanced Chemiluminescence Detection Kit (#32106, Thermo Scientific, Waltham, MA, USA) on Tanon 4500 gel imaging system (Shanghai, China).
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3

Comprehensive Protein Expression Analysis

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Total ovary lysates were separated on SDS-PAGE. After electrophoresis, the protein was transferred to PVDF membrane. The membranes were blocked with 5% skimmed milk and incubated with anti-GRP78 (1:1000, #11587–1-AP, Proteintech, Hubei, China), anti-PARP1 (1:4000, #66520-1-lg, Proteintech), anti-PAR (1:1000, #4335-MC-100, Bio-techne, Minneapolis, USA), anti-mTOR (1:1000, #20657-1-AP, Proteintech), anti-p-mTOR (1:800, #sc-293133, Santa cruz, Dallas, Texas, USA), anti-KitL (1:1000, #bs-0545R, Biorbyt, Hubei, China), anti-p-IRE1α (1:800#, bs-16698R, Biorbyt), anti-IRE1α (1:1000, #27528-1-AP, Proteintech), anti-ATF4 (1:1000, #10835-1-AP, Proteintech), anti-p-PERK (1:800, #Orb336657, Biorbyt), anti-PERK (1:1000, #24390-1-AP, Proteintech), anti-HA-tag (1:1000, #30701ES60, YEASEN), anti-FLAG-tag (1:1000, #30501ES60, YEASEN) and anti-GAPDH (1:4000, #ab8245, Abcam, Cambridge, UK) antibodies overnight at 4 °C. After TBST washing, the membranes were treated with the corresponding peroxidase-conjugated secondary antibody, and then the signal was detected with an Enhanced Chemiluminescence Detection Kit (#32106, Thermo Scientific, Waltham, MA, USA) on Tanon 4500 gel imaging system (Shanghai, China).
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4

Comprehensive Protein Expression Analysis

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Total ovary lysates were separated on SDS-PAGE. After electrophoresis, the protein was transferred to PVDF membrane. The membranes were blocked with 5% skimmed milk and incubated with anti-GRP78 (1:1000, #11587–1-AP, Proteintech, Hubei, China), anti-PARP1 (1:4000, #66520-1-lg, Proteintech), anti-PAR (1:1000, #4335-MC-100, Bio-techne, Minneapolis, USA), anti-mTOR (1:1000, #20657-1-AP, Proteintech), anti-p-mTOR (1:800, #sc-293133, Santa cruz, Dallas, Texas, USA), anti-KitL (1:1000, #bs-0545R, Biorbyt, Hubei, China), anti-p-IRE1α (1:800#, bs-16698R, Biorbyt), anti-IRE1α (1:1000, #27528-1-AP, Proteintech), anti-ATF4 (1:1000, #10835-1-AP, Proteintech), anti-p-PERK (1:800, #Orb336657, Biorbyt), anti-PERK (1:1000, #24390-1-AP, Proteintech), anti-HA-tag (1:1000, #30701ES60, YEASEN), anti-FLAG-tag (1:1000, #30501ES60, YEASEN) and anti-GAPDH (1:4000, #ab8245, Abcam, Cambridge, UK) antibodies overnight at 4 °C. After TBST washing, the membranes were treated with the corresponding peroxidase-conjugated secondary antibody, and then the signal was detected with an Enhanced Chemiluminescence Detection Kit (#32106, Thermo Scientific, Waltham, MA, USA) on Tanon 4500 gel imaging system (Shanghai, China).
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5

Analyzing Lung Tumor Protein Expression

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Lung tumor tissues and cells were lysed in RIPA lysis buffer and BCA kit was adopted to test the concentration of total protein (E-BC-K318-M, Elabscience, Wuhan, China). Then, protein was separated, and transferred into PVDF membrane. After blocking with skimmed milk, the membranes were incubated overnight anti-IRE1α (27,528-1-AP, 1:2000), anti-XBP1s (24,868-1-AP, 1:6000), anti-GRP78/BIP (GRP78/BIP, 1:10,000), anti-CHOP (15,204-1-AP, 1:3000), anti-PERK (24,390-1-AP, 1:2000), and anti-β-actin (81,115-1-RR, 1:20,000) (Proteintech, Wuhan, China); anti-E-cadherin (#3195, 1:1000), and anti-N-cadherin (#13,116, 1:1000) (CST, Boston, MA, USA); and Vimentin (sc-373717, 1:5000, Santa Cruz Biotechnology, Inc, Santa Cruz, CA, USA). Second antibody (anti-Rabbit IgG-HRP, SA00001-2, 1:10,000, Proteintech, Wuhan, China) was subsequently incubated for 2 h. Finally, immunoblots were performed by the enhanced chemiluminescence (ECL) kit (34,577, Thermo Fisher Scientific, Waltham, MA, USA), and visualized by Tanon 5200 (Tanon, Shanghai, China).
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6

Western Blot Analysis of ER Stress Markers

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Cell or tissue lysates and prestained protein molecular weight markers (#26612, Pierce, USA) were separated by sodium dodecyl sulphate‐polyacrylamide gel electrophoresis (SDS‐PAGE), followed by transferring onto polyvinylidene fluoride (PVDF) membranes. The membranes were blocked in Tris‐buffered saline with 0.5% Tween 20 (TBST) containing 5% bovine serum albumin (BSA) and probed with primary antibodies overnight at 4℃. Then, the membranes were washed three times and incubated with the horseradish peroxidase (HRP)‐conjugated secondary antibodies goat‐anti‐rabbit IgG (#7074) and horse‐anti‐mouse IgG (#7076). The primary antibodies used in the study were anti‐p300 (#86377), anti‐p‐IRE1α (#PA1‐16927, Invitrogen, USA), anti‐IRE1α (#3294), anti‐XBP1s (#24868‐1‐AP, Proteintech, USA), anti‐acetylated lysine (Ac‐K; #9681), anti‐activating transcription factor 4 (ATF4; #11815), anti‐glucose regulated protein 94 (GRP94; #2104), anti‐binding immunoglobulin protein (BIP; #3183), anti‐C/EBP homologous protein (CHOP; #2895), anti‐ubiquitin (#3933), anti‐Herpud1 (ab150424, Abcam, USA), and anti‐GAPDH (#2118). Antibodies whose supplier is not stated were purchased from Cell Signalling Technology (USA). Immunoreactivity was visualized by enhanced chemiluminescence (ECL, #34577, Pierce, USA).
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